Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES18012 | Sorghum | cytosol | 68.52 | 68.2 |
| EES18016 | Sorghum | cytosol | 68.06 | 68.06 |
| TraesCS1A01G445800.1 | Wheat | cytosol | 68.52 | 63.52 |
| GSMUA_Achr10P... | Banana | cytosol | 63.43 | 60.62 |
| GSMUA_Achr10P... | Banana | cytosol | 60.19 | 53.72 |
| GSMUA_Achr11P... | Banana | cytosol | 62.5 | 53.36 |
| KRH42697 | Soybean | cytosol | 52.78 | 47.9 |
| KRH58804 | Soybean | cytosol | 51.85 | 47.46 |
| VIT_05s0062g00780.t01 | Wine grape | cytosol | 53.24 | 46.56 |
| KRG97381 | Soybean | cytosol | 51.39 | 45.31 |
| TraesCS1B01G480500.2 | Wheat | cytosol, plastid | 65.74 | 44.38 |
| HORVU1Hr1G095170.3 | Barley | cytosol, mitochondrion, nucleus | 59.26 | 43.99 |
| PGSC0003DMT400011652 | Potato | cytosol | 39.35 | 43.81 |
| KRH31533 | Soybean | cytosol | 49.07 | 43.62 |
| TraesCS1D01G454500.1 | Wheat | plastid | 65.74 | 43.29 |
| Solyc12g098650.1.1 | Tomato | cytosol | 39.35 | 42.93 |
| KXG19891 | Sorghum | cytosol | 54.63 | 41.7 |
| OQU85511 | Sorghum | mitochondrion | 40.28 | 40.85 |
Protein Annotations
| Gene3D:2.70.50.30 | MapMan:27.4.4 | UniProt:A0A1B6PAH9 | GO:GO:0003674 | GO:GO:0005094 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0050790 |
| InterPro:IPR024792 | InterPro:Ig_E-set | ProteinID:KXG22739.1 | EnsemblPlants:KXG22740 | ProteinID:KXG22740 | ProteinID:KXG22740.1 |
| ProteinID:KXG22741.1 | PFAM:PF02115 | PRINTS:PR00492 | PANTHER:PTHR10980 | PANTHER:PTHR10980:SF20 | InterPro:RhoGDI_dom_sf |
| InterPro:Rho_GDI | EnsemblPlantsGene:SORBI_3009G260700 | SUPFAM:SSF81296 | UniParc:UPI00081AE83F | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr9:-:59383001..59398238
Molecular Weight (calculated)
24468.4 Da
IEP (calculated)
4.165
GRAVY (calculated)
-0.646
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKEENKETS VSISNNDTDT NGLDDDDYDD DDGKHTVMLG PQVPLKDQLE LDKDDDSLRR WKEQLLGDVD TNKLGETAEP EVTILNLTIL TPERPDLVLA
101: IPLVLDDKGY AFALKDGSTY SFRFSFTVSN NIVSGLRYTH TVWKTGVRVE KQKVMLGTFS PRQEPYIYEA EEDTTPSGIF ARGSYSAKLK FVDDDGNVYL
201: DMNYCFEIRK DWPATA
101: IPLVLDDKGY AFALKDGSTY SFRFSFTVSN NIVSGLRYTH TVWKTGVRVE KQKVMLGTFS PRQEPYIYEA EEDTTPSGIF ARGSYSAKLK FVDDDGNVYL
201: DMNYCFEIRK DWPATA
001: MVLEDEMKKG EASGETSEKM GLSRKNSGSS LSPTEDDEED EDKKLELGPM IALKEQLERD KDDESLRRWK EQLLGVVDLE DVGETPDPVV KILDLTIRSP
101: DREEMVLTIP EDGLPNPKGP WFTIKEGSKY TLVFNFRVTN NIVSGLRYNN TVWKTGVKVD STKAMLGTFS PQAESYQHVM PEEMTPSGMF ARGSYSARTK
201: FIDDDNKCYL EINYTFDIRK SWQ
101: DREEMVLTIP EDGLPNPKGP WFTIKEGSKY TLVFNFRVTN NIVSGLRYNN TVWKTGVKVD STKAMLGTFS PQAESYQHVM PEEMTPSGMF ARGSYSARTK
201: FIDDDNKCYL EINYTFDIRK SWQ
Arabidopsis Description
Immunoglobulin E-set superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HYS9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.