CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038046_P003	Maize	cytosol	88.48	89.3
Os01t0913600-01	Rice	plasma membrane	85.71	85.71
EES18016	Sorghum	cytosol	84.33	84.72
TraesCS3D01G414900.1	Wheat	cytosol	79.72	84.39
TraesCS3B01G454500.1	Wheat	cytosol	77.88	82.44
TraesCS3A01G419200.1	Wheat	cytosol	77.88	82.44
HORVU3Hr1G092980.2	Barley	cytosol	81.11	71.26
KXG22740	Sorghum	cytosol	68.2	68.52
GSMUA_Achr10P...	Banana	cytosol	65.9	63.27
GSMUA_Achr10P...	Banana	cytosol	64.98	58.26
GSMUA_Achr11P...	Banana	cytosol	61.75	52.96
KRH42697	Soybean	cytosol	57.6	52.52
KRH58804	Soybean	cytosol	55.3	50.85
VIT_05s0062g00780.t01	Wine grape	cytosol	55.76	48.99
KRG97381	Soybean	cytosol	52.07	46.12
KRH31533	Soybean	cytosol	51.61	46.09
PGSC0003DMT400011652	Potato	cytosol	39.17	43.81
OQU85511	Sorghum	mitochondrion	42.86	43.66
Solyc12g098650.1.1	Tomato	cytosol	39.17	42.93
KXG19891	Sorghum	cytosol	54.38	41.7

Protein Annotations

Gene3D:2.70.50.30	MapMan:27.4.4	EntrezGene:8066769	UniProt:C5YW55	EnsemblPlants:EES18012	ProteinID:EES18012
ProteinID:EES18012.1	GO:GO:0003674	GO:GO:0005094	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0030234	GO:GO:0050790	InterPro:IPR024792	InterPro:Ig_E-set
PFAM:PF02115	PRINTS:PR00492	PANTHER:PTHR10980	PANTHER:PTHR10980:SF20	InterPro:RhoGDI_dom_sf	InterPro:Rho_GDI
EnsemblPlantsGene:SORBI_3009G098400	SUPFAM:SSF81296	unigene:Sbi.5570	UniParc:UPI0001A88BC1	RefSeq:XP_002439582.1	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:36828333..36830399

Molecular Weight (calculated)

24829.1 Da

IEP (calculated)

4.360

GRAVY (calculated)

-0.780

Length

217 amino acids

Sequence
(BLAST)

001: MDDKEKEKEK EKEKEKHADG TDVEEEEEDE EGNKRIVVLG PQVPLKEQLE LDKDDESLRR WKEQLLGQVD TEQLGETAEP EVKVLNLTIL SPGRPDLVLP
101: IPFHADEKGY AFALKDGSPY SFRFSFIVSN NIVSGLKYTN TVWKTGVKVE TQKMMLGTFS PQLEPYVYEG EEETTPAGIF ARGSYSAKLK FVDDDGKCYL
201: EMSYYFEIRK EWPAGTQ

Best Arabidopsis Sequence Match ( AT3G07880.1 )
(BLAST)

001: MSLVSGARDM GFDDNNNNKN NKDGDDENSS SRTRADDDAL SRQMSESSLC ATEEEEDDDS KLQLGPQYTI KEHLEKDKDD ESLRKWKEQL LGSVDVTNIG
101: ETLDPEVRID SLAIISPGRP DIVLLVPENG NPKGMWFTLK EGSKYNLKFT FHVNNNIVSG LRYTNTVWKT GVKVDRAKEM LGTFSPQLEP YNHVMPEETT
201: PSGMFARGSY SARTKFLDDD NKCYLEINYS FDIRKEWPAL

Arabidopsis Description

GDI1Putative RHO GDP-dissociation inhibitor 1 [Source:UniProtKB/TrEMBL;Acc:Q541X0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.