CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74038	Soybean	cytosol	92.51	90.13
KRH36543	Soybean	cytosol	71.81	65.73
VIT_12s0059g00580.t01	Wine grape	cytosol	69.16	65.69
KRH11529	Soybean	nucleus	72.69	64.71
KRH51157	Soybean	cytosol	70.48	64.26
KRH01997	Soybean	cytosol	69.16	63.05
GSMUA_Achr9P12630_001	Banana	cytosol	62.11	59.24
Zm00001d051687_P001	Maize	cytosol	60.35	59.05
GSMUA_Achr5P04110_001	Banana	cytosol	66.08	56.82
GSMUA_Achr7P20430_001	Banana	cytosol	65.2	56.49
Zm00001d017859_P002	Maize	cytosol	60.35	55.47
TraesCS6B01G310800.1	Wheat	cytosol	59.03	52.14
TraesCS6A01G282400.1	Wheat	cytosol	59.47	51.72
OQU85511	Sorghum	mitochondrion	48.46	51.64
TraesCS6D01G262900.1	Wheat	cytosol	58.59	50.96
KRH58804	Soybean	cytosol	52.86	50.85
KRH42697	Soybean	cytosol	52.42	50.0
KRG97381	Soybean	cytosol	53.74	49.8
KRH31533	Soybean	cytosol	52.42	48.97
Os06t0318300-02	Rice	cytosol	57.71	48.52
KXG19891	Sorghum	cytosol	57.71	46.29
KRG95708	Soybean	cytosol	43.17	42.06
KRH19602	Soybean	cytosol	40.09	38.08
Os02t0719000-01	Rice	cytosol	59.91	36.07
KRH32228	Soybean	cytosol	41.85	35.98

Protein Annotations

EntrezGene:100803512	Gene3D:2.70.50.30	MapMan:27.4.4	UniProt:A0A0R0GGY5	EMBL:ACUP02008492	EnsemblPlantsGene:GLYMA_14G005400
GO:GO:0003674	GO:GO:0005094	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0030234	GO:GO:0050790	InterPro:IPR024792	InterPro:Ig_E-set	EnsemblPlants:KRH14075
ProteinID:KRH14075	ProteinID:KRH14075.1	PFAM:PF02115	PRINTS:PR00492	PANTHER:PTHR10980	PANTHER:PTHR10980:SF22
InterPro:RhoGDI_dom_sf	InterPro:Rho_GDI	SUPFAM:SSF81296	UniParc:UPI00019AAA00	:	:

Description

hypothetical protein

Coordinates

chr14:-:442754..445074

Molecular Weight (calculated)

25877.9 Da

IEP (calculated)

4.561

GRAVY (calculated)

-0.824

Length

227 amino acids

Sequence
(BLAST)

001: MGFDENKETG EKSDHANEEH YKSEGEPLSR HVNESSIHAT EDEEDEVGSK LQLGPQCTLK EHLEKDKDDE SLRRWKEQLL GSVDVNNVAE ILDPEVNITC
101: LSIISPDRDD IVLSIPENGN PKGLWFTLKE GCHYRLKFTF HVSNNIVSGL KYTNTVWKTG VKVDSSKEML GTFSPQAEPY THEMPEETTP SGLFARGSYS
201: ARSKFLDDDN KCYLEINYTF DIRKEWA

Best Arabidopsis Sequence Match ( AT3G07880.1 )
(BLAST)

001: MSLVSGARDM GFDDNNNNKN NKDGDDENSS SRTRADDDAL SRQMSESSLC ATEEEEDDDS KLQLGPQYTI KEHLEKDKDD ESLRKWKEQL LGSVDVTNIG
101: ETLDPEVRID SLAIISPGRP DIVLLVPENG NPKGMWFTLK EGSKYNLKFT FHVNNNIVSG LRYTNTVWKT GVKVDRAKEM LGTFSPQLEP YNHVMPEETT
201: PSGMFARGSY SARTKFLDDD NKCYLEINYS FDIRKEWPAL

Arabidopsis Description

GDI1Putative RHO GDP-dissociation inhibitor 1 [Source:UniProtKB/TrEMBL;Acc:Q541X0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.