Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH19602 | Soybean | cytosol | 67.05 | 74.06 |
| KRG95708 | Soybean | cytosol | 59.09 | 66.95 |
| Solyc09g072670.2.1 | Tomato | cytosol | 51.52 | 61.82 |
| VIT_07s0005g03900.t01 | Wine grape | cytosol | 48.48 | 54.01 |
| GSMUA_Achr5P21760_001 | Banana | cytosol | 45.08 | 51.07 |
| GSMUA_Achr6P36650_001 | Banana | mitochondrion | 48.48 | 42.11 |
| KRH14075 | Soybean | cytosol | 35.98 | 41.85 |
| KRH74038 | Soybean | cytosol | 35.61 | 40.34 |
| KRH01997 | Soybean | cytosol | 37.12 | 39.36 |
| KRH42697 | Soybean | cytosol | 35.23 | 39.08 |
| KRH58804 | Soybean | cytosol | 34.85 | 38.98 |
| KRH51157 | Soybean | cytosol | 35.23 | 37.35 |
| KRH36543 | Soybean | cytosol | 34.85 | 37.1 |
| KRH11529 | Soybean | nucleus | 35.23 | 36.47 |
| KRG97381 | Soybean | cytosol | 33.71 | 36.33 |
| KRH31533 | Soybean | cytosol | 32.95 | 35.8 |
Protein Annotations
| EntrezGene:100803429 | Gene3D:2.70.50.30 | MapMan:27.4.4 | UniProt:A0A0R0I022 | EMBL:ACUP02006105 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_10G039300 | GO:GO:0003674 | GO:GO:0005094 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0050790 | InterPro:IPR024792 | InterPro:Ig_E-set |
| EnsemblPlants:KRH32228 | ProteinID:KRH32228 | ProteinID:KRH32228.1 | PFAM:PF02115 | PRINTS:PR00492 | PANTHER:PTHR10980 |
| PANTHER:PTHR10980:SF16 | InterPro:RhoGDI_dom_sf | InterPro:Rho_GDI | SUPFAM:SSF81296 | UniParc:UPI0003DEB3B6 | SEG:seg |
Description
hypothetical protein
Coordinates
chr10:+:3484313..3487965
Molecular Weight (calculated)
30049.4 Da
IEP (calculated)
5.048
GRAVY (calculated)
-0.699
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGANWRITD EEAGPSSSSG IASTKQQNPP ETFHHRKEAE EEEETEEEEE EDVCQHKNIT FVPGPLLSLK DQIEKDKEDE SLRRWKEKLL GCMESDLDGQ
101: IHPEVKFHSI GIISEDFGEV ITSLSVDESQ NGHILFTLRE GSHYQLKLKF SVLHNIVSGL TYCNTVWKGG LQVDQSKGML GTFAPQKEPY VHALKEDITP
201: SGVLARGVYS AKIKFEDDDR RCHMELKYSL EIKKRGCGSL ILDQNNIIEV PLLRDSKINR RLQR
101: IHPEVKFHSI GIISEDFGEV ITSLSVDESQ NGHILFTLRE GSHYQLKLKF SVLHNIVSGL TYCNTVWKGG LQVDQSKGML GTFAPQKEPY VHALKEDITP
201: SGVLARGVYS AKIKFEDDDR RCHMELKYSL EIKKRGCGSL ILDQNNIIEV PLLRDSKINR RLQR
001: MVLNDEEMKA GESSEEPKGQ GLSRKNSHSS MCPTDDDEEE EDKKLELGPM IALKEQLEKD KDDESLRRWK EQLLGSVDLE EVGETPDPLV KILTLTIRSP
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL
Arabidopsis Description
At1g12070 [Source:UniProtKB/TrEMBL;Acc:O65371]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.