Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG95708 | Soybean | cytosol | 66.95 | 68.67 |
| KRH32228 | Soybean | cytosol | 74.06 | 67.05 |
| Solyc09g072670.2.1 | Tomato | cytosol | 57.74 | 62.73 |
| VIT_07s0005g03900.t01 | Wine grape | cytosol | 53.56 | 54.01 |
| GSMUA_Achr5P21760_001 | Banana | cytosol | 49.79 | 51.07 |
| GSMUA_Achr6P36650_001 | Banana | mitochondrion | 51.88 | 40.79 |
| KRH14075 | Soybean | cytosol | 38.08 | 40.09 |
| KRH74038 | Soybean | cytosol | 38.49 | 39.48 |
| KRH58804 | Soybean | cytosol | 38.91 | 39.41 |
| KRH42697 | Soybean | cytosol | 38.49 | 38.66 |
| KRH36543 | Soybean | cytosol | 38.49 | 37.1 |
| KRH31533 | Soybean | cytosol | 37.24 | 36.63 |
| KRH51157 | Soybean | cytosol | 38.08 | 36.55 |
| KRH11529 | Soybean | nucleus | 38.91 | 36.47 |
| KRG97381 | Soybean | cytosol | 37.24 | 36.33 |
| KRH01997 | Soybean | cytosol | 37.66 | 36.14 |
Protein Annotations
| EntrezGene:100792535 | Gene3D:2.70.50.30 | MapMan:27.4.4 | UniProt:A0A0R4J4R0 | EMBL:ACUP02008192 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_13G125700 | GO:GO:0003674 | GO:GO:0005094 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0050790 | InterPro:IPR024792 | InterPro:Ig_E-set |
| EnsemblPlants:KRH19602 | ProteinID:KRH19602 | ProteinID:KRH19602.1 | PFAM:PF02115 | PRINTS:PR00492 | PANTHER:PTHR10980 |
| PANTHER:PTHR10980:SF16 | InterPro:RhoGDI_dom_sf | InterPro:Rho_GDI | SUPFAM:SSF81296 | UniParc:UPI00019AA9FF | SEG:seg |
Description
hypothetical protein
Coordinates
chr13:+:23908172..23911178
Molecular Weight (calculated)
27009.5 Da
IEP (calculated)
4.917
GRAVY (calculated)
-0.790
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGANWKITE EEAGPSSSSG IASNKQQNPP ETFHHQHHRK EAAAEEEETE EEEEDDVDHH NNSTFVPGPL LSLKDQIEKD KEDESLRRWK EKLLGCMESD
101: LDGQIHPEVK FHSIGIISED FGEVITPLSV DESQNGHILF TLKEGSHYQL KLKFSVLHNI VSGLAYCNNV WKGGLQVDQS KGMLGTFAPQ KEPYVHTLKE
201: DITPSGVLAR GVYSAKIKFE DDDGRCHMEL KYSLEIKKR
101: LDGQIHPEVK FHSIGIISED FGEVITPLSV DESQNGHILF TLKEGSHYQL KLKFSVLHNI VSGLAYCNNV WKGGLQVDQS KGMLGTFAPQ KEPYVHTLKE
201: DITPSGVLAR GVYSAKIKFE DDDGRCHMEL KYSLEIKKR
001: MVLNDEEMKA GESSEEPKGQ GLSRKNSHSS MCPTDDDEEE EDKKLELGPM IALKEQLEKD KDDESLRRWK EQLLGSVDLE EVGETPDPLV KILTLTIRSP
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL
Arabidopsis Description
At1g12070 [Source:UniProtKB/TrEMBL;Acc:O65371]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.