Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG95708 | Soybean | cytosol | 59.49 | 60.52 |
| Solyc09g072670.2.1 | Tomato | cytosol | 56.12 | 60.45 |
| KRH19602 | Soybean | cytosol | 54.01 | 53.56 |
| GSMUA_Achr5P21760_001 | Banana | cytosol | 50.63 | 51.5 |
| KRH32228 | Soybean | cytosol | 54.01 | 48.48 |
| GSMUA_Achr6P36650_001 | Banana | mitochondrion | 53.59 | 41.78 |
| VIT_05s0062g00780.t01 | Wine grape | cytosol | 41.35 | 39.68 |
| VIT_12s0059g00580.t01 | Wine grape | cytosol | 39.66 | 39.33 |
| VIT_00s0187g00210.t01 | Wine grape | cytosol | 37.97 | 38.79 |
Protein Annotations
| EntrezGene:100254819 | wikigene:100254819 | Gene3D:2.70.50.30 | MapMan:27.4.4 | ProteinID:CCB60148 | ProteinID:CCB60148.1 |
| UniProt:F6HZN3 | EMBL:FN596502 | GO:GO:0003674 | GO:GO:0005094 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0050790 | InterPro:IPR024792 |
| InterPro:Ig_E-set | EntrezGene:LOC100254819 | wikigene:LOC100254819 | PFAM:PF02115 | PFscan:PS51257 | PANTHER:PTHR10980 |
| PANTHER:PTHR10980:SF16 | InterPro:RhoGDI_dom_sf | InterPro:Rho_GDI | SUPFAM:SSF81296 | TIGR:TC61838 | UniParc:UPI00015CA944 |
| ArrayExpress:VIT_07s0005g03900 | EnsemblPlantsGene:VIT_07s0005g03900 | EnsemblPlants:VIT_07s0005g03900.t01 | unigene:Vvi.12114 | RefSeq:XP_002271565 | RefSeq:XP_002271565.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7:+:6895699..6898362
Molecular Weight (calculated)
26520.8 Da
IEP (calculated)
4.522
GRAVY (calculated)
-0.814
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MENGKVAEEA GPSSGGGSGC SSASAGGKGE KQREMIQKTD DEVVGNDDCD GDDDDDDRDD GFVPGPLIPL KEQLEKDKED ESLRRWKEKL LGCLEEDFNG
101: QMDPEVRFHS IGLVSEDLEE INAPLPVHES QKNDFLFILK EGSHYRRKLT FTVLHNIVSG LTYSNTVWKG GFQVYESKGM LGTFAPQREP YVVTLDDETT
201: PSGVLARGTY SAKLKFQDDD RRCHMELKYS FQIKKRS
101: QMDPEVRFHS IGLVSEDLEE INAPLPVHES QKNDFLFILK EGSHYRRKLT FTVLHNIVSG LTYSNTVWKG GFQVYESKGM LGTFAPQREP YVVTLDDETT
201: PSGVLARGTY SAKLKFQDDD RRCHMELKYS FQIKKRS
001: MSLVSGARDM GFDDNNNNKN NKDGDDENSS SRTRADDDAL SRQMSESSLC ATEEEEDDDS KLQLGPQYTI KEHLEKDKDD ESLRKWKEQL LGSVDVTNIG
101: ETLDPEVRID SLAIISPGRP DIVLLVPENG NPKGMWFTLK EGSKYNLKFT FHVNNNIVSG LRYTNTVWKT GVKVDRAKEM LGTFSPQLEP YNHVMPEETT
201: PSGMFARGSY SARTKFLDDD NKCYLEINYS FDIRKEWPAL
101: ETLDPEVRID SLAIISPGRP DIVLLVPENG NPKGMWFTLK EGSKYNLKFT FHVNNNIVSG LRYTNTVWKT GVKVDRAKEM LGTFSPQLEP YNHVMPEETT
201: PSGMFARGSY SARTKFLDDD NKCYLEINYS FDIRKEWPAL
Arabidopsis Description
GDI1Putative RHO GDP-dissociation inhibitor 1 [Source:UniProtKB/TrEMBL;Acc:Q541X0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.