Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g072670.2.1 | Tomato | cytosol | 51.07 | 54.09 |
| GSMUA_Achr6P36650_001 | Banana | mitochondrion | 66.95 | 51.32 |
| VIT_07s0005g03900.t01 | Wine grape | cytosol | 51.5 | 50.63 |
| KRH19602 | Soybean | cytosol | 51.07 | 49.79 |
| KRG95708 | Soybean | cytosol | 49.79 | 49.79 |
| KRH32228 | Soybean | cytosol | 51.07 | 45.08 |
| GSMUA_Achr9P12630_001 | Banana | cytosol | 40.77 | 39.92 |
| GSMUA_Achr10P... | Banana | cytosol | 37.34 | 38.5 |
| GSMUA_Achr10P... | Banana | cytosol | 38.63 | 37.19 |
| GSMUA_Achr7P20430_001 | Banana | cytosol | 39.91 | 35.5 |
| GSMUA_Achr5P04110_001 | Banana | cytosol | 39.91 | 35.23 |
| GSMUA_Achr11P... | Banana | cytosol | 36.91 | 33.99 |
Protein Annotations
| Gene3D:2.70.50.30 | MapMan:27.4.4 | GO:GO:0003674 | GO:GO:0005094 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0050790 | EnsemblPlantsGene:GSMUA_Achr5G21760_001 |
| EnsemblPlants:GSMUA_Achr5P21760_001 | EnsemblPlants:GSMUA_Achr5T21760_001 | InterPro:IPR024792 | InterPro:Ig_E-set | UniProt:M0T0K1 | PFAM:PF02115 |
| PANTHER:PTHR10980 | PANTHER:PTHR10980:SF16 | InterPro:RhoGDI_dom_sf | InterPro:Rho_GDI | SUPFAM:SSF81296 | UniParc:UPI0002961C98 |
| SEG:seg | : | : | : | : | : |
Description
Rho GDP dissociation inhibitor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G21760_001]
Coordinates
chr5:-:23891280..23894121
Molecular Weight (calculated)
25780.1 Da
IEP (calculated)
4.634
GRAVY (calculated)
-0.606
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGRRAEAE SSSAAARAPP EISDDLAEEA KAEFGVGDAE DDGDNEVGRD EGEEPGADGF VPSPLIPLSD QVEKDKEDES LRRWKEKLLG GVDGELNSKV
101: EPEVTFHSIG VVSEGFANLI TSLPVAKNQS QILFTLKEGS KYRLRLTFTV RHNIVSGLTY SNVVWKRGIK VDQIKGMLGT FAPRRDPYEH LLEEETTPSG
201: VLARGIYSAK LKFEDDDKRC HLELSYSFEI KKH
101: EPEVTFHSIG VVSEGFANLI TSLPVAKNQS QILFTLKEGS KYRLRLTFTV RHNIVSGLTY SNVVWKRGIK VDQIKGMLGT FAPRRDPYEH LLEEETTPSG
201: VLARGIYSAK LKFEDDDKRC HLELSYSFEI KKH
001: MVLNDEEMKA GESSEEPKGQ GLSRKNSHSS MCPTDDDEEE EDKKLELGPM IALKEQLEKD KDDESLRRWK EQLLGSVDLE EVGETPDPLV KILTLTIRSP
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL
Arabidopsis Description
At1g12070 [Source:UniProtKB/TrEMBL;Acc:O65371]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.