Factsheet for GSMUA_Achr6P36650_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P21760_001	Banana	cytosol	51.32	66.95
Solyc09g072670.2.1	Tomato	cytosol	40.79	56.36
KRG95708	Soybean	cytosol	41.12	53.65
VIT_07s0005g03900.t01	Wine grape	cytosol	41.78	53.59
KRH19602	Soybean	cytosol	40.79	51.88
KRH32228	Soybean	cytosol	42.11	48.48
GSMUA_Achr9P12630_001	Banana	cytosol	33.55	42.86
GSMUA_Achr10P...	Banana	cytosol	31.25	42.04
GSMUA_Achr7P20430_001	Banana	cytosol	34.21	39.69
GSMUA_Achr5P04110_001	Banana	cytosol	34.21	39.39
GSMUA_Achr10P...	Banana	cytosol	30.92	38.84
GSMUA_Achr11P...	Banana	cytosol	29.61	35.57

Protein Annotations

Gene3D:2.70.50.30	MapMan:27.4.4	GO:GO:0003674	GO:GO:0005094	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030234
GO:GO:0050790	EnsemblPlantsGene:GSMUA_Achr6G36650_001	EnsemblPlants:GSMUA_Achr6P36650_001	EnsemblPlants:GSMUA_Achr6T36650_001	InterPro:IPR024792	InterPro:Ig_E-set
UniProt:M0TDA7	PFAM:PF02115	PRINTS:PR00492	PANTHER:PTHR10980	PANTHER:PTHR10980:SF16	InterPro:RhoGDI_dom_sf
InterPro:Rho_GDI	SUPFAM:SSF81296	TMHMM:TMhelix	UniParc:UPI000295E46E	SEG:seg	:

Description

Rho GDP-dissociation inhibitor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G36650_001]

Coordinates

chr6:+:34576274..34580621

Molecular Weight (calculated)

34108.7 Da

IEP (calculated)

4.776

GRAVY (calculated)

-0.285

Length

304 amino acids

Sequence
(BLAST)

001: MRTIVKKSAV NGRLLRFRFE NGVLLPFTHL VLYVFAGRSS SLIGLFWFVS REKGVPFWCL LFLLLLPRTG MEKGGQRVEA ESSSASAGVV VVVQESSDAV
101: GEETEVELGG RDVEDEEVDA DEDEEAGADG FVPSPLIPLK DQLEKDKEDE SLRRWKEKLL GCVEGELDGQ TEPEVTFHSI GVVSEGHVDS VTSLPVAEMQ
201: NRVLFTLKEG SKYRLKLTFS VRHNIVSGLT YSNTVWKRGL KVDQNKGMLG AFAPQRDPHE LLLEEETTPF GVLARGIYSA KLKFEDDDKR CYLELDYSFE
301: IKKR

Best Arabidopsis Sequence Match ( AT1G12070.1 )
(BLAST)

001: MVLNDEEMKA GESSEEPKGQ GLSRKNSHSS MCPTDDDEEE EDKKLELGPM IALKEQLEKD KDDESLRRWK EQLLGSVDLE EVGETPDPLV KILTLTIRSP
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL

Arabidopsis Description

At1g12070 [Source:UniProtKB/TrEMBL;Acc:O65371]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.