Factsheet for Bra034515.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32048	Canola	nucleus	99.56	99.56
CDY08673	Canola	cytosol	96.89	97.32
Bra036660.1-P	Field mustard	cytosol	93.33	95.89
Bra027043.1-P	Field mustard	cytosol	91.56	91.96
AT1G62450.1	Thale cress	cytosol	87.56	88.34
Bra026994.1-P	Field mustard	cytosol	75.11	75.45
Bra016793.1-P	Field mustard	cytosol	73.78	74.44
Bra019740.1-P	Field mustard	cytosol	73.78	74.11
Bra040037.1-P	Field mustard	cytosol	61.33	60.79
Bra001274.1-P	Field mustard	cytosol	56.89	60.38
Bra029684.1-P	Field mustard	cytosol	63.11	57.26
GSMUA_Achr9P12630_001	Banana	cytosol	58.22	55.04
Zm00001d051687_P001	Maize	cytosol	54.67	53.02
Zm00001d017859_P002	Maize	cytosol	57.33	52.23
GSMUA_Achr7P20430_001	Banana	cytosol	60.44	51.91
GSMUA_Achr5P04110_001	Banana	cytosol	59.11	50.38
TraesCS6B01G310800.1	Wheat	cytosol	56.89	49.81
TraesCS6A01G282400.1	Wheat	cytosol	56.89	49.04
TraesCS6D01G262900.1	Wheat	cytosol	56.44	48.66
OQU85511	Sorghum	mitochondrion	44.89	47.42
KXG19891	Sorghum	cytosol	57.78	45.94
Os06t0318300-02	Rice	cytosol	53.78	44.81
Os02t0719000-01	Rice	cytosol	58.22	34.75

Protein Annotations

Gene3D:2.70.50.30	MapMan:27.4.4	EnsemblPlantsGene:Bra034515	EnsemblPlants:Bra034515.1	EnsemblPlants:Bra034515.1-P	GO:GO:0003674
GO:GO:0005094	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0030234	GO:GO:0050790	InterPro:IPR024792	InterPro:Ig_E-set	UniProt:M4F0C1	PFAM:PF02115
PRINTS:PR00492	PANTHER:PTHR10980	PANTHER:PTHR10980:SF30	InterPro:RhoGDI_dom_sf	InterPro:Rho_GDI	SUPFAM:SSF81296
UniParc:UPI000253E584	SEG:seg	:	:	:	:

Description

AT1G62450 (E=2e-107) | Rho GDP-dissociation inhibitor family protein

Coordinates

chrScaffold000096:-:681037..684761

Molecular Weight (calculated)

25598.8 Da

IEP (calculated)

4.395

GRAVY (calculated)

-0.868

Length

225 amino acids

Sequence
(BLAST)

001: MGLEDEKKGG EASGETSDRE NRLSRMNSES SLSPTEDDDD DDEDRKPELG PMIALKEQLE KDKDDESLRR WKEQLIGVVD LEDVGETPDP VVKILHLTVR
101: SPDRDEMVLT IPDDGVPNPK GPWFTIKEGS KYTLVFNFRV TNNIVSGLRY NNTVWKTGVK VDSTKAMLGT FSPQAEPYQH VMPEETTPSG IFARGSYSAR
201: TKFIDDDNKC YLEINYTFDI RKNWQ

Best Arabidopsis Sequence Match ( AT1G62450.1 )
(BLAST)

001: MVLEDEMKKG EASGETSEKM GLSRKNSGSS LSPTEDDEED EDKKLELGPM IALKEQLERD KDDESLRRWK EQLLGVVDLE DVGETPDPVV KILDLTIRSP
101: DREEMVLTIP EDGLPNPKGP WFTIKEGSKY TLVFNFRVTN NIVSGLRYNN TVWKTGVKVD STKAMLGTFS PQAESYQHVM PEEMTPSGMF ARGSYSARTK
201: FIDDDNKCYL EINYTFDIRK SWQ

Arabidopsis Description

Immunoglobulin E-set superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HYS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.