Factsheet for Bra027043.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12949	Canola	cytosol	100.0	100.0
CDY19551	Canola	cytosol	99.55	99.55
Bra034515.1-P	Field mustard	nucleus	91.96	91.56
Bra036660.1-P	Field mustard	cytosol	87.95	89.95
AT1G62450.1	Thale cress	cytosol	87.95	88.34
Bra026994.1-P	Field mustard	cytosol	74.55	74.55
Bra019740.1-P	Field mustard	cytosol	73.66	73.66
Bra016793.1-P	Field mustard	cytosol	71.43	71.75
Bra040037.1-P	Field mustard	cytosol	60.27	59.47
Bra001274.1-P	Field mustard	cytosol	55.8	58.96
Bra029684.1-P	Field mustard	cytosol	62.05	56.05
GSMUA_Achr9P12630_001	Banana	cytosol	57.14	53.78
Zm00001d017859_P002	Maize	cytosol	58.48	53.04
Zm00001d051687_P001	Maize	cytosol	54.46	52.59
GSMUA_Achr7P20430_001	Banana	cytosol	58.93	50.38
GSMUA_Achr5P04110_001	Banana	cytosol	58.93	50.0
TraesCS6B01G310800.1	Wheat	cytosol	57.14	49.81
TraesCS6A01G282400.1	Wheat	cytosol	57.14	49.04
TraesCS6D01G262900.1	Wheat	cytosol	57.14	49.04
OQU85511	Sorghum	mitochondrion	45.54	47.89
KXG19891	Sorghum	cytosol	57.59	45.58
Os06t0318300-02	Rice	cytosol	52.68	43.7
Os02t0719000-01	Rice	cytosol	58.48	34.75

Protein Annotations

Gene3D:2.70.50.30	MapMan:27.4.4	EnsemblPlantsGene:Bra027043	EnsemblPlants:Bra027043.1	EnsemblPlants:Bra027043.1-P	GO:GO:0003674
GO:GO:0005094	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0030234	GO:GO:0050790	InterPro:IPR024792	InterPro:Ig_E-set	UniProt:M4EE32	PFAM:PF02115
PRINTS:PR00492	PANTHER:PTHR10980	PANTHER:PTHR10980:SF30	InterPro:RhoGDI_dom_sf	InterPro:Rho_GDI	SUPFAM:SSF81296
UniParc:UPI0002542569	SEG:seg	:	:	:	:

Description

AT1G62450 (E=1e-111) | Rho GDP-dissociation inhibitor family protein

Coordinates

chrA09:+:7855862..7857653

Molecular Weight (calculated)

25463.8 Da

IEP (calculated)

4.421

GRAVY (calculated)

-0.833

Length

224 amino acids

Sequence
(BLAST)

001: MELEDEKKGG EASGQTSDKE MGLSRKNSDS SFSPTEDDDE DEEKKPQLGP MIALKEQLEK DKDDESLRRW KEQLIGVVDL EDVGETPDPV VKILDLTVRS
101: PNREDMVLTI PDDGLPNPKG PWFTIKEGSK YTLVFNFRVT NNIVSGLRYN NTVWKTGVKV DSTKAMLGTF SPQAEPYQHV MPEEITPSGI FARGSYSART
201: KFIDDDNKCY LEINYTFDIR KNWQ

Best Arabidopsis Sequence Match ( AT1G62450.1 )
(BLAST)

001: MVLEDEMKKG EASGETSEKM GLSRKNSGSS LSPTEDDEED EDKKLELGPM IALKEQLERD KDDESLRRWK EQLLGVVDLE DVGETPDPVV KILDLTIRSP
101: DREEMVLTIP EDGLPNPKGP WFTIKEGSKY TLVFNFRVTN NIVSGLRYNN TVWKTGVKVD STKAMLGTFS PQAESYQHVM PEEMTPSGMF ARGSYSARTK
201: FIDDDNKCYL EINYTFDIRK SWQ

Arabidopsis Description

Immunoglobulin E-set superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HYS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.