Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036660.1-P | Field mustard | cytosol | 98.17 | 98.17 |
| CDY39796 | Canola | cytosol | 97.72 | 97.72 |
| CDY32048 | Canola | nucleus | 94.06 | 91.56 |
| CDY08673 | Canola | cytosol | 93.61 | 91.52 |
| CDY19551 | Canola | cytosol | 89.04 | 87.05 |
| CDY12949 | Canola | cytosol | 88.58 | 86.61 |
| AT1G62450.1 | Thale cress | cytosol | 86.3 | 84.75 |
| CDY31238 | Canola | cytosol | 39.27 | 81.13 |
| CDY26538 | Canola | cytosol | 74.89 | 73.21 |
| CDY15966 | Canola | cytosol | 74.43 | 72.77 |
| CDY21031 | Canola | cytosol | 73.97 | 72.65 |
| CDY53349 | Canola | cytosol | 73.52 | 71.88 |
| CDY62159 | Canola | cytosol | 73.52 | 71.88 |
| CDY28012 | Canola | cytosol | 63.93 | 56.68 |
| CDY35970 | Canola | cytosol | 63.93 | 56.45 |
| GSMUA_Achr9P12630_001 | Banana | cytosol | 57.99 | 53.36 |
| Zm00001d051687_P001 | Maize | cytosol | 55.25 | 52.16 |
| Zm00001d017859_P002 | Maize | cytosol | 57.99 | 51.42 |
| GSMUA_Achr7P20430_001 | Banana | cytosol | 61.19 | 51.15 |
| GSMUA_Achr5P04110_001 | Banana | cytosol | 60.27 | 50.0 |
| TraesCS6B01G310800.1 | Wheat | cytosol | 56.16 | 47.86 |
| OQU85511 | Sorghum | mitochondrion | 46.12 | 47.42 |
| TraesCS6A01G282400.1 | Wheat | cytosol | 56.16 | 47.13 |
| TraesCS6D01G262900.1 | Wheat | cytosol | 56.16 | 47.13 |
| KXG19891 | Sorghum | cytosol | 57.53 | 44.52 |
| Os06t0318300-02 | Rice | cytosol | 54.79 | 44.44 |
| Os02t0719000-01 | Rice | cytosol | 57.99 | 33.69 |
Protein Annotations
| Gene3D:2.70.50.30 | MapMan:27.4.4 | GO:A0A078EPW9 | EnsemblPlants:CDY03276 | ProteinID:CDY03276 | ProteinID:CDY03276.1 |
| GO:GO:0003674 | GO:GO:0005094 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0030234 | EnsemblPlantsGene:GSBRNA2T00115835001 | InterPro:IPR024792 | InterPro:Ig_E-set | PFAM:PF02115 | PRINTS:PR00492 |
| PANTHER:PTHR10980 | PANTHER:PTHR10980:SF30 | InterPro:RhoGDI_dom_sf | InterPro:Rho_GDI | SUPFAM:SSF81296 | UniParc:UPI0004EB47D9 |
| SEG:seg | : | : | : | : | : |
Description
BnaC09g10720D
Coordinates
chrLK031942:+:313486..314980
Molecular Weight (calculated)
25059.3 Da
IEP (calculated)
4.574
GRAVY (calculated)
-0.837
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLDDENKKG EASGETSDRE NRLSRMNSES SLSEEDEERK PELGPMIALK EQLEKDKDDE SLRRWKEQLI GVVDFEDVGE TPDPVVKILH LTVRSPDREE
101: MVLTIPDDGV PNPKGPWFTI KEGSKYTLVF NFRVTNNIVS GLRYNNTVWK TGVKVDSTKA MLGTFSPQAE PYQHVMPEET TPSGIFARGT YSARTKFVDD
201: DNKCYLEINY TFDIRKNWQ
101: MVLTIPDDGV PNPKGPWFTI KEGSKYTLVF NFRVTNNIVS GLRYNNTVWK TGVKVDSTKA MLGTFSPQAE PYQHVMPEET TPSGIFARGT YSARTKFVDD
201: DNKCYLEINY TFDIRKNWQ
001: MVLNDEEMKA GESSEEPKGQ GLSRKNSHSS MCPTDDDEEE EDKKLELGPM IALKEQLEKD KDDESLRRWK EQLLGSVDLE EVGETPDPLV KILTLTIRSP
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL
101: DREDMVLTIP ENGKPASKGP WFTLKEGSKY TLIFTFRVTN NIVSGLQYSN TVWKTGIKVY SRKEMLGTFS PQAEPYTHVM FEETAPSGLL VRGSYSVKSK
201: FVDDDNQCYL ENNYTFDIRK NWL
Arabidopsis Description
At1g12070 [Source:UniProtKB/TrEMBL;Acc:O65371]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.