Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr6P32700_001 | |
| GSMUA_Achr9P04670_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G45970.1 | GSMUA_Achr6P32700_001 | AT2G38440.1 | 17267444 |
| AT5G45970.1 | GSMUA_Achr9P04670_001 | AT2G38440.1 | 17267444 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 93.37 | 93.37 |
| GSMUA_Achr1P14800_001 | Banana | cytosol | 47.45 | 91.18 |
| VIT_12s0028g02630.t01 | Wine grape | cytosol, nucleus, plastid | 89.29 | 89.29 |
| KRH27004 | Soybean | cytosol, nucleus, plastid | 88.78 | 88.78 |
| Os02t0312600-01 | Rice | cytosol | 87.76 | 87.31 |
| KRH25686 | Soybean | cytosol | 87.24 | 86.8 |
| KRH22321 | Soybean | cytosol, nucleus, plasma membrane | 87.24 | 85.07 |
| GSMUA_Achr1P02620_001 | Banana | cytosol, nucleus, plastid | 85.2 | 84.34 |
| Solyc02g077400.2.1 | Tomato | cytosol, plastid | 84.69 | 84.26 |
| PGSC0003DMT400027852 | Potato | cytosol | 84.69 | 84.26 |
| GSMUA_Achr9P21050_001 | Banana | cytosol | 84.18 | 84.18 |
| GSMUA_Achr7P17810_001 | Banana | cytosol | 83.67 | 83.67 |
| GSMUA_Achr8P33920_001 | Banana | cytosol | 82.14 | 83.42 |
| GSMUA_Achr3P00680_001 | Banana | cytosol, nucleus, plastid | 81.12 | 82.38 |
| GSMUA_Achr1P26470_001 | Banana | cytosol | 80.61 | 81.87 |
| GSMUA_Achr7P03830_001 | Banana | cytosol, nucleus, plastid | 79.59 | 81.68 |
| GSMUA_Achr3P26670_001 | Banana | cytosol | 80.61 | 80.2 |
| CDY58056 | Canola | cytosol | 82.14 | 80.1 |
| CDY57346 | Canola | cytosol | 82.14 | 80.1 |
| Bra025045.1-P | Field mustard | cytosol | 82.14 | 80.1 |
| AT5G45970.1 | Thale cress | cytosol | 81.63 | 79.6 |
| CDX77623 | Canola | cytosol | 81.63 | 79.6 |
| GSMUA_Achr4P04850_001 | Banana | cytosol | 79.59 | 79.19 |
| Bra022004.1-P | Field mustard | cytosol | 81.12 | 79.1 |
| CDY67441 | Canola | cytosol | 80.61 | 79.0 |
| GSMUA_Achr3P06090_001 | Banana | cytosol, mitochondrion, plastid | 79.59 | 72.9 |
| GSMUA_Achr6P26750_001 | Banana | cytosol | 78.06 | 72.86 |
| GSMUA_Achr9P06320_001 | Banana | cytosol | 77.04 | 71.9 |
| GSMUA_Achr8P27380_001 | Banana | cytosol | 75.0 | 70.33 |
| GSMUA_Achr2P00650_001 | Banana | cytosol | 76.02 | 69.95 |
| GSMUA_Achr1P14810_001 | Banana | cytosol | 35.71 | 66.67 |
| GSMUA_Achr6P36120_001 | Banana | cytosol | 80.1 | 56.47 |
Protein Annotations
| MapMan:27.4.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016787 |
| EnsemblPlantsGene:GSMUA_Achr6G13740_001 | EnsemblPlants:GSMUA_Achr6P13740_001 | EnsemblPlants:GSMUA_Achr6T13740_001 | InterPro:IPR003578 | UniProt:M0T6S2 | InterPro:P-loop_NTPase |
| PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51420 | PANTHER:PTHR24072 | PANTHER:PTHR24072:SF178 | SMART:SM00173 |
| SMART:SM00174 | SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | InterPro:Small_GTPase_Rho |
| TIGRFAMs:TIGR00231 | UniParc:UPI000294E82F | SEG:seg | : | : | : |
Description
Rac-like GTP-binding protein 7 [Source:GMGC_GENE;Acc:GSMUA_Achr6G13740_001]
Coordinates
chr6:+:9146099..9147372
Molecular Weight (calculated)
21882.7 Da
IEP (calculated)
9.762
GRAVY (calculated)
-0.030
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTARFIKCV TVGDGAVGKT CMLISYTSNI FPTDYVPTVF DNFSANVIVD GSTVNLGLWD TAGQEDYNRL RPLSYRGADV FLLAFSLISK ASYENVYKKW
101: IPELRHYAPN VPIVLVGTKI DLREDRQFII DHPGTTPITI AQAKELKKMI GAAVYIECSS KTQQNVKAVF DAAIKVVIYP PKPKKKSRKQ RTCLIL
101: IPELRHYAPN VPIVLVGTKI DLREDRQFII DHPGTTPITI AQAKELKKMI GAAVYIECSS KTQQNVKAVF DAAIKVVIYP PKPKKKSRKQ RTCLIL
001: MASRFIKCVT VGDGAVGKTC MLISYTSNTF PTDYVPTVFD NFSANVVVDG NTVNLGLWDT AGQEDYNRLR PLSYRGADVF ILAFSLISKA SYENIAKKWI
101: PELRHYAPGV PIILVGTKLD LRDDKQFFID HPGAVPITTN QGEELKKLIG SAVYIECSSK TQQNVKAVFD AAIKVVLQPP KQKKKKKNKN RCAFL
101: PELRHYAPGV PIILVGTKLD LRDDKQFFID HPGAVPITTN QGEELKKLIG SAVYIECSSK TQQNVKAVFD AAIKVVLQPP KQKKKKKNKN RCAFL
Arabidopsis Description
ARAC4RAC-like GTP-binding protein ARAC4 [Source:UniProtKB/TrEMBL;Acc:Q0WU07]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.