Factsheet for GSMUA_Achr6P36120_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
endoplasmic reticulum 2
plasma membrane 2
cytosol 3
extracellular 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, nucleus, plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr1P15910_001
GSMUA_Achr1P18140_001
GSMUA_Achr1P26070_001
GSMUA_Achr2P03580_001
GSMUA_Achr3P14650_001
GSMUA_Achr6P32700_001
GSMUA_Achr7P05420_001
GSMUA_Achr9P04670_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48040.1	GSMUA_Achr10P...	AT1G22920.1	21798944
AT5G62880.1	GSMUA_Achr10P...	AT1G22920.1	21798944
AT5G62880.1	GSMUA_Achr6P32700_001	AT2G38440.1	17267444
AT5G62880.1	GSMUA_Achr9P04670_001	AT2G38440.1	17267444
AT5G62880.1	GSMUA_Achr10P...	AT4G16340.1	17267444
AT5G62880.1	GSMUA_Achr10P...	AT4G16340.1	17267444
AT5G62880.1	GSMUA_Achr1P15910_001	AT4G36910.1	21798944
AT5G62880.1	GSMUA_Achr1P26070_001	AT4G36910.1	21798944
AT5G62880.1	GSMUA_Achr7P05420_001	AT4G36910.1	21798944
AT5G62880.1	GSMUA_Achr10P...	AT4G38430.1	22500990
AT5G62880.1	GSMUA_Achr1P18140_001	AT4G38430.1	22500990
AT5G62880.1	GSMUA_Achr2P03580_001	AT4G38430.1	22500990
AT5G62880.1	GSMUA_Achr3P14650_001	AT4G38430.1	22500990
AT5G62880.1	GSMUA_Achr6P32700_001	AT5G01730.1	17267444
AT5G62880.1	GSMUA_Achr9P04670_001	AT5G01730.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54429	Soybean	cytosol	20.86	89.23
Solyc03g114070.2.1	Tomato	cytosol	65.83	87.14
PGSC0003DMT400063229	Potato	cytosol	65.47	86.67
VIT_17s0000g07890.t01	Wine grape	cytosol	64.75	85.71
GSMUA_Achr3P06090_001	Banana	cytosol, mitochondrion, plastid	65.47	85.05
Bra035878.1-P	Field mustard	cytosol	62.59	84.88
GSMUA_Achr1P14800_001	Banana	cytosol	30.94	84.31
KRH57035	Soybean	cytosol	63.31	84.21
AT3G48040.1	Thale cress	cytosol	62.23	83.17
GSMUA_Achr9P21050_001	Banana	cytosol	58.63	83.16
GSMUA_Achr2P00650_001	Banana	cytosol	63.67	83.1
AT5G62880.1	Thale cress	cytosol	64.03	82.79
KRH63489	Soybean	cytosol	62.95	82.55
Bra010128.1-P	Field mustard	cytosol	61.51	82.21
GSMUA_Achr7P17810_001	Banana	cytosol	57.91	82.14
CDY56740	Canola	cytosol	63.67	81.94
CDY30738	Canola	cytosol	63.31	81.86
Bra029240.1-P	Field mustard	cytosol	63.31	81.86
CDY00332	Canola	cytosol	62.95	81.4
GSMUA_Achr3P00680_001	Banana	cytosol, nucleus, plastid	56.47	81.35
GSMUA_Achr1P26470_001	Banana	cytosol	56.47	81.35
CDY45748	Canola	cytosol	62.23	81.22
GSMUA_Achr7P03830_001	Banana	cytosol, nucleus, plastid	55.76	81.15
GSMUA_Achr1P02620_001	Banana	cytosol, nucleus, plastid	57.55	80.81
CDY68200	Canola	cytosol	52.52	80.66
GSMUA_Achr6P13740_001	Banana	cytosol	56.47	80.1
GSMUA_Achr8P33920_001	Banana	cytosol	55.4	79.79
GSMUA_Achr10P...	Banana	cytosol	56.12	79.59
GSMUA_Achr3P26670_001	Banana	cytosol	56.12	79.19
GSMUA_Achr4P04850_001	Banana	cytosol	55.76	78.68
PGSC0003DMT400063227	Potato	cytosol	44.96	78.12
KRH54430	Soybean	cytosol	41.01	78.08
GSMUA_Achr6P26750_001	Banana	cytosol	58.27	77.14
GSMUA_Achr9P06320_001	Banana	cytosol	57.55	76.19
GSMUA_Achr8P27380_001	Banana	cytosol	56.83	75.6
KRH03338	Soybean	cytosol, plastid	66.55	72.83
GSMUA_Achr1P14810_001	Banana	cytosol	27.34	72.38

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787
EnsemblPlantsGene:GSMUA_Achr6G36120_001	EnsemblPlants:GSMUA_Achr6P36120_001	EnsemblPlants:GSMUA_Achr6T36120_001	InterPro:IPR003578	UniProt:M0TD55	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF149	SMART:SM00173
SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho
TIGRFAMs:TIGR00231	UniParc:UPI0002948E3C	SEG:seg	:	:	:

Description

Rac-like GTP-binding protein 3 [Source:GMGC_GENE;Acc:GSMUA_Achr6G36120_001]

Coordinates

chr6:-:34171747..34175751

Molecular Weight (calculated)

30847.7 Da

IEP (calculated)

9.958

GRAVY (calculated)

-0.046

Length

278 amino acids

Sequence
(BLAST)

001: MPAIWNPRII LPLQEVHVEP QEQSLLPAKH QKAVGSKNHV ICPSSSSFLS LSLSLLLAFS SLVFLGKNMA STVSRFIKCV TVGDGAVGKT CMLICYTSNK
101: FPTDYIPTVF DNFSANVVAE GITVNLGLWD TAGQEDYNRL RPLSYRGADV FVLAFSLVSR ASYENVLKKW IPELHHYAPG VPVVLVGTKL DLREDKYYLA
201: DHPGVVPVTT AQGEELRKQI GAAYYIECSS KTQQNVKAVF DAAIKVVIQP PTKRKDKKKK KSRHGCLILN FLRGRKLK

Best Arabidopsis Sequence Match ( AT5G62880.1 )
(BLAST)

001: MASSASKFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSANVV VEGTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLSFSLV SRASYENVFK
101: KWIPELQHFA PGVPLVLVGT KLDLREDKHY LADHPGLSPV TTAQGEELRK LIGATYYIEC SSKTQQNVKA VFDSAIKEVI KPLVKQKEKT KKKKKQKSNH
201: GCLSNVLCGR IVTRH

Arabidopsis Description

ARAC10ROP11 [Source:UniProtKB/TrEMBL;Acc:A0A178UC00]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.