Factsheet for GSMUA_Achr4P04850_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plasma membrane
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P14800_001	Banana	cytosol	47.72	92.16
GSMUA_Achr7P03830_001	Banana	cytosol, nucleus, plastid	85.79	88.48
GSMUA_Achr9P21050_001	Banana	cytosol	87.82	88.27
GSMUA_Achr3P26670_001	Banana	cytosol	87.31	87.31
GSMUA_Achr7P17810_001	Banana	cytosol	86.8	87.24
GSMUA_Achr8P33920_001	Banana	cytosol	84.77	86.53
GSMUA_Achr3P00680_001	Banana	cytosol, nucleus, plastid	84.26	86.01
GSMUA_Achr1P26470_001	Banana	cytosol	83.25	84.97
GSMUA_Achr1P02620_001	Banana	cytosol, nucleus, plastid	85.28	84.85
GSMUA_Achr10P...	Banana	cytosol	80.2	80.61
GSMUA_Achr6P13740_001	Banana	cytosol	79.19	79.59
GSMUA_Achr1P14810_001	Banana	cytosol	39.09	73.33
GSMUA_Achr6P26750_001	Banana	cytosol	77.16	72.38
GSMUA_Achr9P06320_001	Banana	cytosol	77.16	72.38
GSMUA_Achr8P27380_001	Banana	cytosol	76.65	72.25
GSMUA_Achr3P06090_001	Banana	cytosol, mitochondrion, plastid	78.17	71.96
GSMUA_Achr2P00650_001	Banana	cytosol	72.59	67.14
GSMUA_Achr6P36120_001	Banana	cytosol	78.68	55.76

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787
EnsemblPlantsGene:GSMUA_Achr4G04850_001	EnsemblPlants:GSMUA_Achr4P04850_001	EnsemblPlants:GSMUA_Achr4T04850_001	InterPro:IPR003578	UniProt:M0SL52	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF249	SMART:SM00173
SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho
TIGRFAMs:TIGR00231	UniParc:UPI00029485E8	SEG:seg	:	:	:

Description

Rac-like GTP-binding protein 6 [Source:GMGC_GENE;Acc:GSMUA_Achr4G04850_001]

Coordinates

chr4:+:3799576..3803782

Molecular Weight (calculated)

21738.0 Da

IEP (calculated)

8.697

GRAVY (calculated)

-0.209

Length

197 amino acids

Sequence
(BLAST)

001: MSASSFVKCV TVGDGAVGKT CMLISYTSNT FPTDYIPTVF DNFSANVVVD GNTVNLGLWD TAGQEDYNRL RPLSYRGADV FLLAFSLISK GSYENVSKKW
101: IPELRHYAPG VPIILVGTKL DLRDDEQFFI DHPGSTSITN AQGEELRKQI GAPCYIECSS KTQENIKPVF DAAIKVALQP SNRKKKKKKA QKGCFIL

Best Arabidopsis Sequence Match ( AT3G51300.1 )
(BLAST)

001: MSASRFVKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVVVN GSTVNLGLWD TAGQEDYNRL RPLSYRGADV FILAFSLISK ASYENVSKKW
101: IPELKHYAPG VPIVLVGTKL DLRDDKQFFI DHPGAVPITT AQGEELRKQI GAPTYIECSS KTQENVKAVF DAAIRVVLQP PKQKKKKSKA QKACSIL

Arabidopsis Description

ARAC11Rac-like GTP-binding protein ARAC11 [Source:UniProtKB/Swiss-Prot;Acc:P92978]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.