Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029240.1-P | Field mustard | cytosol | 99.06 | 98.14 |
| CDY30738 | Canola | cytosol | 99.06 | 98.14 |
| AT5G62880.1 | Thale cress | cytosol | 96.24 | 95.35 |
| CDY68200 | Canola | cytosol | 80.75 | 95.03 |
| CDY00332 | Canola | cytosol | 95.31 | 94.42 |
| CDY56740 | Canola | cytosol | 94.84 | 93.52 |
| KRH54429 | Soybean | cytosol | 26.76 | 87.69 |
| Solyc03g114070.2.1 | Tomato | cytosol | 82.63 | 83.81 |
| KRH57035 | Soybean | cytosol | 82.16 | 83.73 |
| KRH63489 | Soybean | cytosol | 83.1 | 83.49 |
| VIT_17s0000g07890.t01 | Wine grape | cytosol | 82.16 | 83.33 |
| PGSC0003DMT400063229 | Potato | cytosol | 82.16 | 83.33 |
| TraesCS6D01G288300.1 | Wheat | cytosol | 81.22 | 81.22 |
| EES05544 | Sorghum | cytosol | 81.22 | 80.84 |
| TraesCS6A01G309000.2 | Wheat | cytosol | 80.75 | 80.75 |
| Os02t0742200-01 | Rice | cytosol | 80.75 | 80.37 |
| HORVU6Hr1G076210.5 | Barley | cytosol | 80.28 | 79.53 |
| Os06t0234200-03 | Rice | cytosol | 80.28 | 79.53 |
| EER88130 | Sorghum | cytosol | 80.28 | 79.53 |
| KRH54430 | Soybean | cytosol | 54.46 | 79.45 |
| TraesCS7B01G096200.1 | Wheat | cytosol | 78.87 | 78.87 |
| TraesCS7D01G192400.1 | Wheat | cytosol | 78.4 | 78.4 |
| TraesCS7A01G191400.1 | Wheat | cytosol | 78.4 | 78.4 |
| CDY54338 | Canola | cytosol | 72.3 | 78.17 |
| CDX87656 | Canola | cytosol | 71.83 | 78.06 |
| CDY62937 | Canola | cytosol | 71.83 | 78.06 |
| CDX68116 | Canola | cytosol | 71.36 | 77.95 |
| CDX85925 | Canola | cytosol | 71.36 | 77.95 |
| TraesCS6B01G338000.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 77.93 | 77.93 |
| CDY43414 | Canola | cytosol | 71.83 | 77.67 |
| CDY39066 | Canola | cytosol | 71.36 | 77.55 |
| CDY13528 | Canola | cytosol | 71.36 | 77.55 |
| CDX73206 | Canola | cytosol | 70.89 | 77.04 |
| CDY26832 | Canola | cytosol | 70.42 | 76.14 |
| CDY07816 | Canola | cytosol | 67.14 | 76.06 |
| CDY71157 | Canola | cytosol | 60.09 | 75.74 |
| CDY29012 | Canola | cytosol, plastid | 69.95 | 75.63 |
| CDX77994 | Canola | cytosol, plastid | 69.48 | 75.13 |
| CDX90652 | Canola | cytosol, plastid | 69.48 | 75.13 |
| CDX73732 | Canola | cytosol, plastid | 69.48 | 75.13 |
| CDY59617 | Canola | cytosol, plastid | 69.48 | 75.13 |
| PGSC0003DMT400063227 | Potato | cytosol | 56.34 | 75.0 |
| CDX75480 | Canola | cytosol | 69.48 | 74.75 |
| CDY30344 | Canola | cytosol | 69.01 | 74.62 |
| CDY20828 | Canola | cytosol | 69.01 | 74.62 |
| CDY33284 | Canola | cytosol, plastid | 69.01 | 74.62 |
| CDY06854 | Canola | cytosol | 72.77 | 74.16 |
| CDY57592 | Canola | cytosol | 70.89 | 74.02 |
| CDY24378 | Canola | cytosol | 67.61 | 73.85 |
| CDY35236 | Canola | cytosol | 72.3 | 73.68 |
| CDX71303 | Canola | cytosol | 61.5 | 73.18 |
| CDY31409 | Canola | cytosol | 61.5 | 73.18 |
| CDY59407 | Canola | cytosol, plastid | 60.09 | 73.14 |
| CDY29201 | Canola | cytosol | 68.08 | 72.86 |
| CDY67441 | Canola | cytosol | 68.08 | 72.5 |
| CDY57346 | Canola | cytosol | 68.08 | 72.14 |
| CDY58056 | Canola | cytosol | 67.61 | 71.64 |
| CDX77623 | Canola | cytosol | 67.14 | 71.14 |
| KRH03338 | Soybean | cytosol, plastid | 81.69 | 68.5 |
| CDX69104 | Canola | cytosol | 67.61 | 68.25 |
| Zm00001d052273_P004 | Maize | plastid | 69.01 | 67.74 |
| HORVU7Hr1G038980.5 | Barley | cytosol | 79.34 | 67.6 |
| CDY69676 | Canola | cytosol | 27.7 | 67.05 |
| CDY71169 | Canola | plastid | 66.2 | 66.82 |
| CDY48250 | Canola | plastid | 66.2 | 66.2 |
| CDY02239 | Canola | cytosol | 46.95 | 64.1 |
| GSMUA_Achr6P36120_001 | Banana | cytosol | 81.22 | 62.23 |
| CDX89745 | Canola | cytosol | 55.87 | 61.98 |
| CDY02240 | Canola | cytosol | 54.46 | 61.05 |
| Zm00001d044802_P001 | Maize | cytosol | 80.28 | 59.58 |
| CDX89746 | Canola | cytosol | 59.62 | 57.21 |
| Zm00001d018004_P002 | Maize | cytosol, peroxisome, plastid | 81.22 | 34.19 |
Protein Annotations
| MapMan:27.4.1 | Gene3D:3.40.50.300 | GO:A0A078I9E2 | UniProt:A0A078I9E2 | EnsemblPlants:CDY45748 | ProteinID:CDY45748 |
| ProteinID:CDY45748.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00082665001 |
| InterPro:IPR003578 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51420 | PANTHER:PTHR24072 |
| PANTHER:PTHR24072:SF255 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | InterPro:Small_GTPase_Rho | TIGRFAMs:TIGR00231 | UniParc:UPI0004EE55B2 | SEG:seg | : |
Description
BnaC02g42340DBnaC02g42340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I9E2]
Coordinates
chrLK032635:-:97422..99495
Molecular Weight (calculated)
23768.8 Da
IEP (calculated)
9.762
GRAVY (calculated)
-0.225
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKFIKCVT VGDGAVGKTC MLICYTSNKF PTDYIPTVFD NFSANVVVEG TTVNLGLWDT AGQEDYNRLR PLSYRGADVF VLSFSLVSRA SYENVFKKWI
101: PELQHFAPGV PLVLVGTKLD LREDRHYLAD HPGLSPVTTA QGEELRKLIG ATYYIECSSK TQQNVKAVFD SAIKEVIKPV VKQKEKTKKK KKKQKSTHGC
201: LSSILCGRMV TRH
101: PELQHFAPGV PLVLVGTKLD LREDRHYLAD HPGLSPVTTA QGEELRKLIG ATYYIECSSK TQQNVKAVFD SAIKEVIKPV VKQKEKTKKK KKKQKSTHGC
201: LSSILCGRMV TRH
001: MASSASKFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSANVV VEGTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLSFSLV SRASYENVFK
101: KWIPELQHFA PGVPLVLVGT KLDLREDKHY LADHPGLSPV TTAQGEELRK LIGATYYIEC SSKTQQNVKA VFDSAIKEVI KPLVKQKEKT KKKKKQKSNH
201: GCLSNVLCGR IVTRH
101: KWIPELQHFA PGVPLVLVGT KLDLREDKHY LADHPGLSPV TTAQGEELRK LIGATYYIEC SSKTQQNVKA VFDSAIKEVI KPLVKQKEKT KKKKKQKSNH
201: GCLSNVLCGR IVTRH
Arabidopsis Description
ARAC10ROP11 [Source:UniProtKB/TrEMBL;Acc:A0A178UC00]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.