Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G35950.1 | CDX91460 | AT2G38440.1 | 17267444 |
| AT4G35950.1 | CDY69042 | AT2G38440.1 | 17267444 |
| AT4G35950.1 | CDY32235 | AT4G16340.1 | 17267444 |
| AT4G35950.1 | CDY34451 | AT4G16340.1 | 17267444 |
| AT4G35950.1 | CDY39815 | AT5G01730.1 | 17267444 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037248.1-P | Field mustard | cytosol | 99.49 | 99.49 |
| CDY26832 | Canola | cytosol | 98.48 | 98.48 |
| AT4G35950.1 | Thale cress | cytosol | 95.94 | 95.94 |
| CDY07816 | Canola | cytosol | 90.36 | 94.68 |
| CDY29012 | Canola | cytosol, plastid | 93.4 | 93.4 |
| CDY69676 | Canola | cytosol | 41.62 | 93.18 |
| CDY33284 | Canola | cytosol, plastid | 92.89 | 92.89 |
| CDX90652 | Canola | cytosol, plastid | 92.89 | 92.89 |
| CDY20828 | Canola | cytosol | 92.89 | 92.89 |
| CDX73732 | Canola | cytosol, plastid | 92.39 | 92.39 |
| CDX77994 | Canola | cytosol, plastid | 92.39 | 92.39 |
| CDY59617 | Canola | cytosol, plastid | 92.39 | 92.39 |
| CDY24378 | Canola | cytosol | 91.37 | 92.31 |
| CDY29201 | Canola | cytosol | 91.88 | 90.95 |
| CDY59407 | Canola | cytosol, plastid | 80.71 | 90.86 |
| CDY71157 | Canola | cytosol | 77.67 | 90.53 |
| VIT_04s0023g03860.t01 | Wine grape | cytosol | 88.83 | 89.29 |
| CDX75480 | Canola | cytosol | 88.83 | 88.38 |
| CDY13528 | Canola | cytosol | 86.29 | 86.73 |
| CDX73206 | Canola | cytosol | 86.29 | 86.73 |
| CDY39066 | Canola | cytosol | 86.29 | 86.73 |
| CDX85925 | Canola | cytosol | 85.79 | 86.67 |
| CDX68116 | Canola | cytosol | 85.79 | 86.67 |
| CDY54338 | Canola | cytosol | 86.29 | 86.29 |
| CDY62937 | Canola | cytosol | 85.79 | 86.22 |
| CDX87656 | Canola | cytosol | 85.28 | 85.71 |
| CDY31409 | Canola | cytosol | 77.67 | 85.47 |
| CDX71303 | Canola | cytosol | 77.67 | 85.47 |
| CDY43414 | Canola | cytosol | 85.28 | 85.28 |
| CDX69104 | Canola | cytosol | 87.82 | 81.99 |
| CDY57592 | Canola | cytosol | 84.26 | 81.37 |
| CDY58056 | Canola | cytosol | 79.7 | 78.11 |
| CDX77623 | Canola | cytosol | 79.19 | 77.61 |
| CDY57346 | Canola | cytosol | 79.19 | 77.61 |
| CDY67441 | Canola | cytosol | 77.67 | 76.5 |
| CDY02239 | Canola | cytosol | 57.87 | 73.08 |
| CDX89745 | Canola | cytosol | 70.56 | 72.4 |
| CDY02240 | Canola | cytosol | 69.04 | 71.58 |
| CDY35236 | Canola | cytosol | 75.63 | 71.29 |
| CDY71169 | Canola | plastid | 76.14 | 71.09 |
| CDY06854 | Canola | cytosol | 75.13 | 70.81 |
| CDY48250 | Canola | plastid | 76.14 | 70.42 |
| CDY56740 | Canola | cytosol | 76.65 | 69.91 |
| CDY45748 | Canola | cytosol | 74.62 | 69.01 |
| CDY30738 | Canola | cytosol | 75.13 | 68.84 |
| CDY00332 | Canola | cytosol | 74.62 | 68.37 |
| CDY68200 | Canola | cytosol | 62.44 | 67.96 |
| CDX89746 | Canola | cytosol | 71.57 | 63.51 |
Protein Annotations
| MapMan:27.4.1 | Gene3D:3.40.50.300 | GO:A0A078GYW4 | UniProt:A0A078GYW4 | EnsemblPlants:CDY30344 | ProteinID:CDY30344 |
| ProteinID:CDY30344.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00045027001 |
| InterPro:IPR003578 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51420 | PANTHER:PTHR24072 |
| PANTHER:PTHR24072:SF179 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | InterPro:Small_GTPase_Rho | TIGRFAMs:TIGR00231 | UniParc:UPI0004EE90D7 | SEG:seg | : |
Description
BnaA09g09330DBnaA09g09330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GYW4]
Coordinates
chrLK032252:-:362572..364665
Molecular Weight (calculated)
21486.9 Da
IEP (calculated)
9.114
GRAVY (calculated)
-0.082
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MSASRFIKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVVVN GATINLGLWD TAGQEDYNRL RPLSYRGADV FILAFSLISK ASYENVSKKW
101: IPELEHYAPG VPIVLVGTKL DLRDDKQFFV DHPGAVPITN AQGEELKKLI GAPAYIECSS KSQENVKGVF DAAIRVVLQP PNKKKKKGKA QKACSIL
101: IPELEHYAPG VPIVLVGTKL DLRDDKQFFV DHPGAVPITN AQGEELKKLI GAPAYIECSS KSQENVKGVF DAAIRVVLQP PNKKKKKGKA QKACSIL
001: MSASRFVKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVVVN GSTVNLGLWD TAGQEDYNRL RPLSYRGADV FILAFSLISK ASYENVSKKW
101: IPELKHYAPG VPIVLVGTKL DLRDDKQFFI DHPGAVPITT AQGEELRKQI GAPTYIECSS KTQENVKAVF DAAIRVVLQP PKQKKKKSKA QKACSIL
101: IPELKHYAPG VPIVLVGTKL DLRDDKQFFI DHPGAVPITT AQGEELRKQI GAPTYIECSS KTQENVKAVF DAAIRVVLQP PKQKKKKSKA QKACSIL
Arabidopsis Description
ARAC11Rac-like GTP-binding protein ARAC11 [Source:UniProtKB/Swiss-Prot;Acc:P92978]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.