Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040869.1-P | Field mustard | cytosol | 90.43 | 97.14 |
| CDY20828 | Canola | cytosol | 97.87 | 93.4 |
| CDY24378 | Canola | cytosol | 96.28 | 92.82 |
| AT2G17800.1 | Thale cress | cytosol | 96.81 | 92.39 |
| CDY26832 | Canola | cytosol | 96.28 | 91.88 |
| CDY59407 | Canola | cytosol, plastid | 85.11 | 91.43 |
| CDY29201 | Canola | cytosol | 96.28 | 90.95 |
| CDY29012 | Canola | cytosol, plastid | 95.21 | 90.86 |
| CDY30344 | Canola | cytosol | 94.68 | 90.36 |
| CDX90652 | Canola | cytosol, plastid | 94.68 | 90.36 |
| CDX77994 | Canola | cytosol, plastid | 94.15 | 89.85 |
| CDY33284 | Canola | cytosol, plastid | 94.15 | 89.85 |
| CDY59617 | Canola | cytosol, plastid | 94.15 | 89.85 |
| CDX73732 | Canola | cytosol, plastid | 94.15 | 89.85 |
| CDY71157 | Canola | cytosol | 78.72 | 87.57 |
| VIT_04s0023g03860.t01 | Wine grape | cytosol | 90.43 | 86.73 |
| CDX75480 | Canola | cytosol | 88.83 | 84.34 |
| CDY54338 | Canola | cytosol | 88.3 | 84.26 |
| CDY13528 | Canola | cytosol | 87.77 | 84.18 |
| CDY39066 | Canola | cytosol | 87.77 | 84.18 |
| CDY62937 | Canola | cytosol | 87.77 | 84.18 |
| CDX68116 | Canola | cytosol | 87.23 | 84.1 |
| CDX85925 | Canola | cytosol | 87.23 | 84.1 |
| CDX73206 | Canola | cytosol | 87.23 | 83.67 |
| CDY43414 | Canola | cytosol | 87.23 | 83.25 |
| CDX87656 | Canola | cytosol | 86.7 | 83.16 |
| CDY31409 | Canola | cytosol | 77.66 | 81.56 |
| CDX71303 | Canola | cytosol | 77.66 | 81.56 |
| CDY69676 | Canola | cytosol | 37.77 | 80.68 |
| CDY57592 | Canola | cytosol | 86.17 | 79.41 |
| CDX69104 | Canola | cytosol | 87.77 | 78.2 |
| CDY58056 | Canola | cytosol | 80.85 | 75.62 |
| CDX77623 | Canola | cytosol | 80.32 | 75.12 |
| CDY57346 | Canola | cytosol | 80.32 | 75.12 |
| CDY67441 | Canola | cytosol | 78.72 | 74.0 |
| CDY02239 | Canola | cytosol | 58.51 | 70.51 |
| CDY71169 | Canola | plastid | 77.13 | 68.72 |
| CDY48250 | Canola | plastid | 77.13 | 68.08 |
| CDY56740 | Canola | cytosol | 78.19 | 68.06 |
| CDY35236 | Canola | cytosol | 75.0 | 67.46 |
| CDY06854 | Canola | cytosol | 75.0 | 67.46 |
| CDX89745 | Canola | cytosol | 68.62 | 67.19 |
| CDY45748 | Canola | cytosol | 76.06 | 67.14 |
| CDY30738 | Canola | cytosol | 76.6 | 66.98 |
| CDY02240 | Canola | cytosol | 67.55 | 66.84 |
| CDY00332 | Canola | cytosol | 76.06 | 66.51 |
| CDY68200 | Canola | cytosol | 63.3 | 65.75 |
| CDX89746 | Canola | cytosol | 72.87 | 61.71 |
Protein Annotations
| MapMan:27.4.1 | Gene3D:3.40.50.300 | GO:A0A078F355 | UniProt:A0A078F355 | EnsemblPlants:CDY07816 | ProteinID:CDY07816 |
| ProteinID:CDY07816.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00124962001 |
| InterPro:IPR003578 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51420 | PANTHER:PTHR24072 |
| PANTHER:PTHR24072:SF179 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | InterPro:Small_GTPase_Rho | TIGRFAMs:TIGR00231 | UniParc:UPI0004EDDCF8 | SEG:seg | : |
Description
BnaC03g48060DBnaC03g48060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F355]
Coordinates
chrLK031981:-:198600..200266
Molecular Weight (calculated)
20621.9 Da
IEP (calculated)
9.129
GRAVY (calculated)
0.010
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MSASRFIKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVVVN GATVNLGLWD TAGQEDYNRL RPLSYRGADV FILAFSLISK ASYENVSKKW
101: IPELTHYAPG VPIVLVGTKL DLRDDKQFFV DHPGAVPITT SQGEELMKLI GAPSYIECRV FDAAIRVVLQ PPKQKKKKSK AQKACSIL
101: IPELTHYAPG VPIVLVGTKL DLRDDKQFFV DHPGAVPITT SQGEELMKLI GAPSYIECRV FDAAIRVVLQ PPKQKKKKSK AQKACSIL
001: MSASRFIKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVVVN GATVNLGLWD TAGQEDYNRL RPLSYRGADV FILAFSLISK ASYENVSKKW
101: IPELKHYAPG VPIVLVGTKL DLRDDKQFFI DHPGAVPITT AQGEELKKLI GAPAYIECSS KTQENVKGVF DAAIRVVLQP PKQKKKKSKA QKACSIL
101: IPELKHYAPG VPIVLVGTKL DLRDDKQFFI DHPGAVPITT AQGEELKKLI GAPAYIECSS KTQENVKGVF DAAIRVVLQP PKQKKKKSKA QKACSIL
Arabidopsis Description
ARAC1ROP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VRA4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.