Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G35950.1 | CDX91460 | AT2G38440.1 | 17267444 |
| AT4G35950.1 | CDY69042 | AT2G38440.1 | 17267444 |
| AT4G35950.1 | CDY32235 | AT4G16340.1 | 17267444 |
| AT4G35950.1 | CDY34451 | AT4G16340.1 | 17267444 |
| AT4G35950.1 | CDY39815 | AT5G01730.1 | 17267444 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30344 | Canola | cytosol | 98.48 | 98.48 |
| AT4G35950.1 | Thale cress | cytosol | 97.46 | 97.46 |
| CDY07816 | Canola | cytosol | 91.88 | 96.28 |
| CDY29012 | Canola | cytosol, plastid | 94.92 | 94.92 |
| CDY33284 | Canola | cytosol, plastid | 94.42 | 94.42 |
| CDX90652 | Canola | cytosol, plastid | 94.42 | 94.42 |
| CDY20828 | Canola | cytosol | 94.42 | 94.42 |
| CDY59617 | Canola | cytosol, plastid | 93.91 | 93.91 |
| CDX73732 | Canola | cytosol, plastid | 93.91 | 93.91 |
| CDX77994 | Canola | cytosol, plastid | 93.91 | 93.91 |
| CDY24378 | Canola | cytosol | 92.89 | 93.85 |
| CDY69676 | Canola | cytosol | 41.62 | 93.18 |
| CDY59407 | Canola | cytosol, plastid | 82.23 | 92.57 |
| CDY29201 | Canola | cytosol | 93.4 | 92.46 |
| CDY71157 | Canola | cytosol | 78.17 | 91.12 |
| VIT_04s0023g03860.t01 | Wine grape | cytosol | 90.36 | 90.82 |
| CDX75480 | Canola | cytosol | 88.83 | 88.38 |
| CDX68116 | Canola | cytosol | 87.31 | 88.21 |
| CDX85925 | Canola | cytosol | 87.31 | 88.21 |
| CDY54338 | Canola | cytosol | 87.82 | 87.82 |
| CDY62937 | Canola | cytosol | 87.31 | 87.76 |
| CDY39066 | Canola | cytosol | 87.31 | 87.76 |
| CDY13528 | Canola | cytosol | 87.31 | 87.76 |
| CDX73206 | Canola | cytosol | 86.8 | 87.24 |
| CDY43414 | Canola | cytosol | 86.8 | 86.8 |
| CDX87656 | Canola | cytosol | 85.79 | 86.22 |
| CDX71303 | Canola | cytosol | 78.17 | 86.03 |
| CDY31409 | Canola | cytosol | 78.17 | 86.03 |
| CDY57592 | Canola | cytosol | 85.79 | 82.84 |
| CDX69104 | Canola | cytosol | 87.82 | 81.99 |
| CDY58056 | Canola | cytosol | 80.71 | 79.1 |
| CDX77623 | Canola | cytosol | 80.2 | 78.61 |
| CDY57346 | Canola | cytosol | 80.2 | 78.61 |
| CDY67441 | Canola | cytosol | 78.68 | 77.5 |
| CDY02239 | Canola | cytosol | 57.87 | 73.08 |
| CDY71169 | Canola | plastid | 77.16 | 72.04 |
| CDY35236 | Canola | cytosol | 76.14 | 71.77 |
| CDY48250 | Canola | plastid | 77.16 | 71.36 |
| CDX89745 | Canola | cytosol | 69.54 | 71.35 |
| CDY56740 | Canola | cytosol | 78.17 | 71.3 |
| CDY06854 | Canola | cytosol | 75.63 | 71.29 |
| CDY02240 | Canola | cytosol | 68.53 | 71.05 |
| CDY45748 | Canola | cytosol | 76.14 | 70.42 |
| CDY30738 | Canola | cytosol | 76.65 | 70.23 |
| CDY00332 | Canola | cytosol | 76.14 | 69.77 |
| CDY68200 | Canola | cytosol | 63.96 | 69.61 |
| CDX89746 | Canola | cytosol | 71.57 | 63.51 |
Protein Annotations
| MapMan:27.4.1 | Gene3D:3.40.50.300 | GO:A0A078GNS4 | UniProt:A0A078GNS4 | EnsemblPlants:CDY26832 | ProteinID:CDY26832 |
| ProteinID:CDY26832.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00035787001 |
| InterPro:IPR003578 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51420 | PANTHER:PTHR24072 |
| PANTHER:PTHR24072:SF179 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | InterPro:Small_GTPase_Rho | TIGRFAMs:TIGR00231 | UniParc:UPI0004EF2D8C | SEG:seg | : |
Description
BnaC09g09590DBnaC09g09590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNS4]
Coordinates
chrLK032194:+:508429..509995
Molecular Weight (calculated)
21486.9 Da
IEP (calculated)
9.114
GRAVY (calculated)
-0.083
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MSASRFIKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVVVN GATVNLGLWD TAGQEDYNRL RPLSYRGADV FILAFSLISK ASYENVSKKW
101: IPELEHYAPG VPIVLVGTKL DLRDDKQFFV DHPGAVPITN AQGEELKKLI GAPAYIECSS KSQENVKGVF DAAIRVVLQP PKQKKKKGKA QKACSIL
101: IPELEHYAPG VPIVLVGTKL DLRDDKQFFV DHPGAVPITN AQGEELKKLI GAPAYIECSS KSQENVKGVF DAAIRVVLQP PKQKKKKGKA QKACSIL
001: MSASRFIKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVVVN GATVNLGLWD TAGQEDYNRL RPLSYRGADV FILAFSLISK ASYENVSKKW
101: IPELKHYAPG VPIVLVGTKL DLRDDKQFFI DHPGAVPITT AQGEELKKLI GAPAYIECSS KTQENVKGVF DAAIRVVLQP PKQKKKKSKA QKACSIL
101: IPELKHYAPG VPIVLVGTKL DLRDDKQFFI DHPGAVPITT AQGEELKKLI GAPAYIECSS KTQENVKGVF DAAIRVVLQP PKQKKKKSKA QKACSIL
Arabidopsis Description
ARAC1ROP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VRA4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.