Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G16340.1 | Thale cress | cytosol | 95.23 | 94.92 |
| CDY34451 | Canola | endoplasmic reticulum | 97.42 | 94.12 |
| Os03t0328000-01 | Rice | plasma membrane | 14.47 | 93.95 |
| Bra038448.1-P | Field mustard | cytosol | 98.63 | 86.82 |
| GSMUA_Achr10P... | Banana | extracellular | 48.79 | 83.88 |
| Solyc08g016050.2.1 | Tomato | nucleus | 41.28 | 83.11 |
| Solyc08g016060.1.1 | Tomato | extracellular | 12.88 | 82.46 |
| VIT_11s0016g00100.t01 | Wine grape | mitochondrion | 82.4 | 81.38 |
| KRH43411 | Soybean | endoplasmic reticulum | 79.77 | 79.29 |
| KRH13046 | Soybean | endoplasmic reticulum | 79.33 | 78.86 |
| KXG39465 | Sorghum | cytosol | 75.49 | 74.88 |
| HORVU4Hr1G051250.3 | Barley | cytosol | 75.0 | 74.59 |
| TraesCS4B01G173500.4 | Wheat | cytosol | 74.84 | 74.39 |
| TraesCS4A01G131100.1 | Wheat | cytosol | 74.84 | 74.39 |
| TraesCS4D01G175600.4 | Wheat | cytosol | 74.62 | 74.17 |
| Zm00001d047540_P001 | Maize | cytosol, mitochondrion | 74.62 | 73.73 |
| Zm00001d029004_P004 | Maize | cytosol | 75.11 | 73.46 |
| Solyc08g016070.1.1 | Tomato | mitochondrion | 21.88 | 64.98 |
| GSMUA_Achr10P... | Banana | cytosol | 28.12 | 63.49 |
| Zm00001d024153_P001 | Maize | cytosol | 4.71 | 56.58 |
| Zm00001d035539_P001 | Maize | cytosol | 5.87 | 52.2 |
| Zm00001d012342_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 6.36 | 50.0 |
| Zm00001d042645_P001 | Maize | cytosol, nucleus, peroxisome | 12.88 | 40.03 |
| TraesCS5A01G195400.1 | Wheat | cytosol | 2.74 | 36.76 |
| TraesCS5D01G127700.1 | Wheat | cytosol | 2.8 | 35.66 |
| Zm00001d007384_P003 | Maize | cytosol, endoplasmic reticulum, peroxisome | 6.25 | 31.84 |
| Zm00001d035534_P003 | Maize | cytosol | 7.24 | 27.91 |
| Zm00001d046856_P002 | Maize | endoplasmic reticulum, nucleus, peroxisome | 8.0 | 27.39 |
| Zm00001d038664_P001 | Maize | cytosol, nucleus, plastid | 7.24 | 24.67 |
Protein Annotations
| Gene3D:1.20.58.740 | Gene3D:1.25.40.410 | MapMan:27.4.3.2 | GO:A0A078H0L2 | UniProt:A0A078H0L2 | EnsemblPlants:CDY32235 |
| ProteinID:CDY32235 | ProteinID:CDY32235.1 | ncoils:Coil | InterPro:DHR-1_domain | InterPro:DHR-2 | InterPro:DOCK |
| InterPro:DOCK_C | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0065009 | EnsemblPlantsGene:GSBRNA2T00051674001 | InterPro:IPR027007 | InterPro:IPR027357 | PFAM:PF06920 |
| PFAM:PF14429 | PFscan:PS51650 | PFscan:PS51651 | PANTHER:PTHR23317 | PANTHER:PTHR23317:SF76 | UniParc:UPI0004EEAF11 |
| SEG:seg | : | : | : | : | : |
Description
BnaA01g17490DBnaA01g17490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0L2]
Coordinates
chrLK032290:-:177223..188912
Molecular Weight (calculated)
205879.0 Da
IEP (calculated)
6.200
GRAVY (calculated)
-0.241
Length
1824 amino acids
Sequence
(BLAST)
(BLAST)
0001: MENNNLRFRK IPRQPLSLPK LEPLLDGNLE QWPHLNQLVQ CYGTEWIKDA NKYGHYDTTR PDTFQTQIFE GPDTDTETEF RLASARSATL DEDVASVSGT
0101: PFTDSGSPKH FGLPPLPAYE PAFDWENERS MIFGQRTPES PAASYSSGLK ISVRVLSLAF QSGLVEPFYG SISLYNQERK EKLSEDFYFH ISPTEMQDAK
0201: PSSENRGVFY LDAPSASVCL LIQLEKTATE EGGVTTSVYS RKEPVHLTER EKQKLQVWSR IMPYRESFAW AVVPLFDNSI TTNTGESASP SSPLAPSMTA
0301: SSSHDGVFEP MAKITSDGKQ GSSGGSSVVV EISNLNKVKE NYSEESIQDP KRKVHKPVKG VLRLEIEKHR NGHGDVEDLS ENGSIRNESL DLTDRLGDLT
0401: LMKCPSAGSA GPHNSGSKWS TEDVSKNLTS SSGNVDNCYY AFDFCSTTRN EPFLHLFHCL YVYPVAVTLS RKRNPFIRVE LRKDDTDVRK QPLEAIYPRE
0501: PGVSLQKWAH TQVAVGARAA SYHDEIKVSL PATWTPSHHL LFTFFHVDLQ TKLEAPRPVV IGYASLPLST YIHSRSDISL PVMRELVPHY LQETTKERLD
0601: YLEDGKSIFK LRLRLCSSLY PTNERVRDFC LEYDRHTLRT SPPWGSELLQ AINSLKHVDS TALLQFLYPI LNMLLHLIGN GGETLQVAAF RAMVDILTRV
0701: QQVSFDDADR NRFLVTYVDY SFDDFGGNHP PVYPGLSTVW GSLARSKAKG YRVGPVYDDV LSMAWFFLEL IVKSMALEQA RLFDHNLPSG EDVPPMQLKE
0801: SVFRCIMQLF DCLLTEVHER CKKGLSLAKR LNSSLAFFCY DLLYIIEPCQ VYELVSLYMD KFSGVCQSIL HECKLTFLQI ISDHDLFVEM PGRDPSDRNY
0901: LSSILIQELF LSLDHDELPL RAKGARILVI LLCKHEFDAR YQKAEDKLYI AQLYFPFVGQ ILDEMPVFYN LNATEKREVL IGVLQIVRNL DDTSLVKAWQ
1001: QSIARTRLYF KLMEECLILF EHKKAADSIL GGNNSRGPVN EGAGSPKYSE RLSPAINNYL SEASRQEVRL EGTPDNGYLW QRVNSQLASP SQPYSLREAL
1101: AQAQSSRIGA SAQALRESLH PILRQKLELW EENVSATVSL QVLEITEKFS SMAASHNIAT DYGKLDCITT ILTSFFSRNQ SLAFWKAFFP IFNRIFDLHG
1201: ATLMARENDR FLKQIAFHLL RLAVYRNDSV RKRAVIGLQI LVKSSLYFMQ TARLRALLTI TLSELMSDVQ VTHMKTDNTL EESGEARRLQ LSLSEMADEA
1301: KSVTLLRECG LPDDTLLVIP EKFTENRWSW AQVKQLSDSL VLALDASLGH ALLGSVMAMD RYAAAESFYK LGMAFAPVPD LHIMWLLHLC DAHQEMQSWA
1401: EAAQCAVAVA GVIMQALVAR NDGVWSKDHV SALRKICPMV SGEFTTEASA AEVEGYGASK LTVDSAVKYL QLANKLFSQA ELYHFCASIL ELVIPVYKSR
1501: KAYGQLAKCH TLLTNIYESI LDQESNPIPF IDATYYRVGF YGEKFGKLDR KEYVYREPRD VRLGDIMEKL SHIYESRMDS NHILHIIPDS RQVKAEELQA
1601: GACYLQITAV DAVMEDEDLG SRRERIFSLS TGSVRARVFD RFLFDTPFTK NGKTQGGLED QWKRRTVLQT EGSFPALVNR LLVTKSESLE FSPVENAIGM
1701: IETRTTALRN ELEEPRSSDG DHLPRLQSLQ RILQGSVAVQ VNSGVLSVCT AFLSGEPATR LRSQELQQLI AALLEFMAVC KRAIRVHFRL IGEEDQEFHT
1801: QLVNGFQSLT AELSHYIPAI LSEL
0101: PFTDSGSPKH FGLPPLPAYE PAFDWENERS MIFGQRTPES PAASYSSGLK ISVRVLSLAF QSGLVEPFYG SISLYNQERK EKLSEDFYFH ISPTEMQDAK
0201: PSSENRGVFY LDAPSASVCL LIQLEKTATE EGGVTTSVYS RKEPVHLTER EKQKLQVWSR IMPYRESFAW AVVPLFDNSI TTNTGESASP SSPLAPSMTA
0301: SSSHDGVFEP MAKITSDGKQ GSSGGSSVVV EISNLNKVKE NYSEESIQDP KRKVHKPVKG VLRLEIEKHR NGHGDVEDLS ENGSIRNESL DLTDRLGDLT
0401: LMKCPSAGSA GPHNSGSKWS TEDVSKNLTS SSGNVDNCYY AFDFCSTTRN EPFLHLFHCL YVYPVAVTLS RKRNPFIRVE LRKDDTDVRK QPLEAIYPRE
0501: PGVSLQKWAH TQVAVGARAA SYHDEIKVSL PATWTPSHHL LFTFFHVDLQ TKLEAPRPVV IGYASLPLST YIHSRSDISL PVMRELVPHY LQETTKERLD
0601: YLEDGKSIFK LRLRLCSSLY PTNERVRDFC LEYDRHTLRT SPPWGSELLQ AINSLKHVDS TALLQFLYPI LNMLLHLIGN GGETLQVAAF RAMVDILTRV
0701: QQVSFDDADR NRFLVTYVDY SFDDFGGNHP PVYPGLSTVW GSLARSKAKG YRVGPVYDDV LSMAWFFLEL IVKSMALEQA RLFDHNLPSG EDVPPMQLKE
0801: SVFRCIMQLF DCLLTEVHER CKKGLSLAKR LNSSLAFFCY DLLYIIEPCQ VYELVSLYMD KFSGVCQSIL HECKLTFLQI ISDHDLFVEM PGRDPSDRNY
0901: LSSILIQELF LSLDHDELPL RAKGARILVI LLCKHEFDAR YQKAEDKLYI AQLYFPFVGQ ILDEMPVFYN LNATEKREVL IGVLQIVRNL DDTSLVKAWQ
1001: QSIARTRLYF KLMEECLILF EHKKAADSIL GGNNSRGPVN EGAGSPKYSE RLSPAINNYL SEASRQEVRL EGTPDNGYLW QRVNSQLASP SQPYSLREAL
1101: AQAQSSRIGA SAQALRESLH PILRQKLELW EENVSATVSL QVLEITEKFS SMAASHNIAT DYGKLDCITT ILTSFFSRNQ SLAFWKAFFP IFNRIFDLHG
1201: ATLMARENDR FLKQIAFHLL RLAVYRNDSV RKRAVIGLQI LVKSSLYFMQ TARLRALLTI TLSELMSDVQ VTHMKTDNTL EESGEARRLQ LSLSEMADEA
1301: KSVTLLRECG LPDDTLLVIP EKFTENRWSW AQVKQLSDSL VLALDASLGH ALLGSVMAMD RYAAAESFYK LGMAFAPVPD LHIMWLLHLC DAHQEMQSWA
1401: EAAQCAVAVA GVIMQALVAR NDGVWSKDHV SALRKICPMV SGEFTTEASA AEVEGYGASK LTVDSAVKYL QLANKLFSQA ELYHFCASIL ELVIPVYKSR
1501: KAYGQLAKCH TLLTNIYESI LDQESNPIPF IDATYYRVGF YGEKFGKLDR KEYVYREPRD VRLGDIMEKL SHIYESRMDS NHILHIIPDS RQVKAEELQA
1601: GACYLQITAV DAVMEDEDLG SRRERIFSLS TGSVRARVFD RFLFDTPFTK NGKTQGGLED QWKRRTVLQT EGSFPALVNR LLVTKSESLE FSPVENAIGM
1701: IETRTTALRN ELEEPRSSDG DHLPRLQSLQ RILQGSVAVQ VNSGVLSVCT AFLSGEPATR LRSQELQQLI AALLEFMAVC KRAIRVHFRL IGEEDQEFHT
1801: QLVNGFQSLT AELSHYIPAI LSEL
0001: MENNNLGLRF RKLPRQPLAL PKLDPLLDEN LEQWPHLNQL VQCYGTEWVK DVNKYGHYEN IRPDSFQTQI FEGPDTDTET EIRLASARSA TIEEDVASIS
0101: GRPFSDPGSS KHFGQPPLPA YEPAFDWENE RAMIFGQRTP ESPAASYSSG LKISVRVLSL AFQSGLVEPF FGSIALYNQE RKEKLSEDFY FQIQPTEMQD
0201: AKLSSENRGV FYLDAPSASV CLLIQLEKTA TEEGGVTSSV YSRKEPVHLT EREKQKLQVW SRIMPYRESF AWAVVPLFDN NLTTNTGESA SPSSPLAPSM
0301: TASSSHDGVY EPIAKITSDG KQGYSGGSSV VVEISNLNKV KESYSEESIQ DPKRKVHKPV KGVLRLEIEK HRNGHGDFED LSENGSIIND SLDPTDRLSD
0401: LTLMKCPSSS SGGPRNGCSK WNSEDAKDVS RNLTSSCGTP DLNCYHAFDF CSTTRNEPFL HLFHCLYVYP VAVTLSRKRN PFIRVELRKD DTDIRKQPLE
0501: AIYPREPGVS LQKWVHTQVA VGARAASYHD EIKVSLPATW TPSHHLLFTF FHVDLQTKLE APRPVVVGYA SLPLSTYIHS RSDISLPVMR ELVPHYLQES
0601: TKERLDYLED GKNIFKLRLR LCSSLYPTNE RVRDFCLEYD RHTLQTRPPW GSELLQAINS LKHVDSTALL QFLYPILNML LHLIGNGGET LQVAAFRAMV
0701: DILTRVQQVS FDDADRNRFL VTYVDYSFDD FGGNQPPVYP GLATVWGSLA RSKAKGYRVG PVYDDVLSMA WFFLELIVKS MALEQARLYD HNLPTGEDVP
0801: PMQLKESVFR CIMQLFDCLL TEVHERCKKG LSLAKRLNSS LAFFCYDLLY IIEPCQVYEL VSLYMDKFSG VCQSVLHECK LTFLQIISDH DLFVEMPGRD
0901: PSDRNYLSSI LIQELFLSLD HDELPLRAKG ARILVILLCK HEFDARYQKA EDKLYIAQLY FPFVGQILDE MPVFYNLNAT EKREVLIGVL QIVRNLDDTS
1001: LVKAWQQSIA RTRLYFKLME ECLILFEHKK AADSILGGNN SRGPVSEGAG SPKYSERLSP AINNYLSEAS RQEVRLEGTP DNGYLWQRVN SQLASPSQPY
1101: SLREALAQAQ SSRIGASAQA LRESLHPILR QKLELWEENV SATVSLQVLE ITENFSSMAA SHNIATDYGK LDCITTILTS FFSRNQSLAF WKAFFPIFNR
1201: IFDLHGATLM ARENDRFLKQ IAFHLLRLAV YRNDSVRKRA VIGLQILVKS SLYFMQTARL RALLTITLSE LMSDVQVTHM KSDNTLEESG EARRLQQSLS
1301: EMADEAKSVN LLRECGLPDD TLLIIPEKFT ENRWSWAEVK HLSDSLVLAL DASLGHALLG SVMAMDRYAA AESFYKLGMA FAPVPDLHIM WLLHLCDAHQ
1401: EMQSWAEAAQ CAVAVAGVIM QALVARNDGV WSKDHVSALR KICPMVSGEF TTEASAAEVE GYGASKLTVD SAVKYLQLAN KLFSQAELYH FCASILELVI
1501: PVYKSRKAYG QLAKCHTLLT NIYESILDQE SNPIPFIDAT YYRVGFYGEK FGKLDRKEYV YREPRDVRLG DIMEKLSHIY ESRMDSNHIL HIIPDSRQVK
1601: AEDLQAGVCY LQITAVDAVM EDEDLGSRRE RIFSLSTGSV RARVFDRFLF DTPFTKNGKT QGGLEDQWKR RTVLQTEGSF PALVNRLLVT KSESLEFSPV
1701: ENAIGMIETR TTALRNELEE PRSSDGDHLP RLQSLQRILQ GSVAVQVNSG VLSVCTAFLS GEPATRLRSQ ELQQLIAALL EFMAVCKRAI RVHFRLIGEE
1801: DQEFHTQLVN GFQSLTAELS HYIPAILSEL
0101: GRPFSDPGSS KHFGQPPLPA YEPAFDWENE RAMIFGQRTP ESPAASYSSG LKISVRVLSL AFQSGLVEPF FGSIALYNQE RKEKLSEDFY FQIQPTEMQD
0201: AKLSSENRGV FYLDAPSASV CLLIQLEKTA TEEGGVTSSV YSRKEPVHLT EREKQKLQVW SRIMPYRESF AWAVVPLFDN NLTTNTGESA SPSSPLAPSM
0301: TASSSHDGVY EPIAKITSDG KQGYSGGSSV VVEISNLNKV KESYSEESIQ DPKRKVHKPV KGVLRLEIEK HRNGHGDFED LSENGSIIND SLDPTDRLSD
0401: LTLMKCPSSS SGGPRNGCSK WNSEDAKDVS RNLTSSCGTP DLNCYHAFDF CSTTRNEPFL HLFHCLYVYP VAVTLSRKRN PFIRVELRKD DTDIRKQPLE
0501: AIYPREPGVS LQKWVHTQVA VGARAASYHD EIKVSLPATW TPSHHLLFTF FHVDLQTKLE APRPVVVGYA SLPLSTYIHS RSDISLPVMR ELVPHYLQES
0601: TKERLDYLED GKNIFKLRLR LCSSLYPTNE RVRDFCLEYD RHTLQTRPPW GSELLQAINS LKHVDSTALL QFLYPILNML LHLIGNGGET LQVAAFRAMV
0701: DILTRVQQVS FDDADRNRFL VTYVDYSFDD FGGNQPPVYP GLATVWGSLA RSKAKGYRVG PVYDDVLSMA WFFLELIVKS MALEQARLYD HNLPTGEDVP
0801: PMQLKESVFR CIMQLFDCLL TEVHERCKKG LSLAKRLNSS LAFFCYDLLY IIEPCQVYEL VSLYMDKFSG VCQSVLHECK LTFLQIISDH DLFVEMPGRD
0901: PSDRNYLSSI LIQELFLSLD HDELPLRAKG ARILVILLCK HEFDARYQKA EDKLYIAQLY FPFVGQILDE MPVFYNLNAT EKREVLIGVL QIVRNLDDTS
1001: LVKAWQQSIA RTRLYFKLME ECLILFEHKK AADSILGGNN SRGPVSEGAG SPKYSERLSP AINNYLSEAS RQEVRLEGTP DNGYLWQRVN SQLASPSQPY
1101: SLREALAQAQ SSRIGASAQA LRESLHPILR QKLELWEENV SATVSLQVLE ITENFSSMAA SHNIATDYGK LDCITTILTS FFSRNQSLAF WKAFFPIFNR
1201: IFDLHGATLM ARENDRFLKQ IAFHLLRLAV YRNDSVRKRA VIGLQILVKS SLYFMQTARL RALLTITLSE LMSDVQVTHM KSDNTLEESG EARRLQQSLS
1301: EMADEAKSVN LLRECGLPDD TLLIIPEKFT ENRWSWAEVK HLSDSLVLAL DASLGHALLG SVMAMDRYAA AESFYKLGMA FAPVPDLHIM WLLHLCDAHQ
1401: EMQSWAEAAQ CAVAVAGVIM QALVARNDGV WSKDHVSALR KICPMVSGEF TTEASAAEVE GYGASKLTVD SAVKYLQLAN KLFSQAELYH FCASILELVI
1501: PVYKSRKAYG QLAKCHTLLT NIYESILDQE SNPIPFIDAT YYRVGFYGEK FGKLDRKEYV YREPRDVRLG DIMEKLSHIY ESRMDSNHIL HIIPDSRQVK
1601: AEDLQAGVCY LQITAVDAVM EDEDLGSRRE RIFSLSTGSV RARVFDRFLF DTPFTKNGKT QGGLEDQWKR RTVLQTEGSF PALVNRLLVT KSESLEFSPV
1701: ENAIGMIETR TTALRNELEE PRSSDGDHLP RLQSLQRILQ GSVAVQVNSG VLSVCTAFLS GEPATRLRSQ ELQQLIAALL EFMAVCKRAI RVHFRLIGEE
1801: DQEFHTQLVN GFQSLTAELS HYIPAILSEL
Arabidopsis Description
SPK1Guanine nucleotide exchange factor SPIKE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8SAB7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.