Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G131100.1 | Wheat | cytosol | 98.75 | 98.69 |
| TraesCS4B01G173500.4 | Wheat | cytosol | 98.69 | 98.64 |
| TraesCS4D01G175600.4 | Wheat | cytosol | 98.58 | 98.53 |
| Os03t0328000-01 | Rice | plasma membrane | 15.05 | 98.22 |
| KXG39465 | Sorghum | cytosol | 92.2 | 91.95 |
| Zm00001d047540_P001 | Maize | cytosol, mitochondrion | 90.95 | 90.36 |
| Zm00001d029004_P004 | Maize | cytosol | 91.33 | 89.81 |
| GSMUA_Achr10P... | Banana | extracellular | 50.38 | 87.09 |
| Solyc08g016060.1.1 | Tomato | extracellular | 12.87 | 82.81 |
| Solyc08g016050.2.1 | Tomato | nucleus | 40.08 | 81.13 |
| VIT_11s0016g00100.t01 | Wine grape | mitochondrion | 79.12 | 78.56 |
| KRH43411 | Soybean | endoplasmic reticulum | 76.34 | 76.29 |
| KRH13046 | Soybean | endoplasmic reticulum | 76.01 | 75.97 |
| AT4G16340.1 | Thale cress | cytosol | 75.25 | 75.41 |
| CDY32235 | Canola | cytosol | 74.59 | 75.0 |
| GSMUA_Achr10P... | Banana | cytosol | 32.01 | 72.65 |
| CDY34451 | Canola | endoplasmic reticulum | 73.56 | 71.45 |
| Bra038448.1-P | Field mustard | cytosol | 74.1 | 65.59 |
| Solyc08g016070.1.1 | Tomato | mitochondrion | 21.05 | 62.87 |
Protein Annotations
| Gene3D:1.20.58.740 | Gene3D:1.25.40.410 | MapMan:27.4.3.2 | UniProt:A0A287P0Q5 | InterPro:ARM-type_fold | ncoils:Coil |
| InterPro:DHR-1_domain | InterPro:DHR-2 | InterPro:DOCK | InterPro:DOCK_C | GO:GO:0003674 | GO:GO:0005085 |
| GO:GO:0005089 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008064 | GO:GO:0008150 | GO:GO:0008360 |
| GO:GO:0009605 | GO:GO:0009606 | GO:GO:0009628 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009958 |
| GO:GO:0009987 | GO:GO:0010928 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016192 | GO:GO:0019898 |
| GO:GO:0051493 | GO:GO:0070971 | EnsemblPlantsGene:HORVU4Hr1G051250 | EnsemblPlants:HORVU4Hr1G051250.3 | InterPro:IPR027007 | InterPro:IPR027357 |
| PFAM:PF06920 | PFAM:PF14429 | PFscan:PS51650 | PFscan:PS51651 | PANTHER:PTHR23317 | PANTHER:PTHR23317:SF76 |
| SUPFAM:SSF48371 | UniParc:UPI000B46D503 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:419373385..419388554
Molecular Weight (calculated)
206958.0 Da
IEP (calculated)
6.222
GRAVY (calculated)
-0.244
Length
1834 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDSPAPGEGQ RFKRIPRQPC GRNLELDPLL NENLEQWPHL NELVQCYNAD FVKDDCKYGR YESVAPPSFQ NQIFEGPDTD IETELQLCNA RHSKPEEATE
0101: DDMPSTSGRQ ISETEPSASS SKKHCTLSPL PAYEPAFDWD NERSLIFGQR LPESLPATHN SGLKITVKVL SLSFQAGLVE PFSGTICLYN RDRREKLSED
0201: FYFHILPTEM QDAHISLDRR GVFSLDTPSP SICLLIQLEK AATEEGGVTP SIYSRKEPVH LTEKEKQKLQ VWSRVMPYRE PFAWAMIPLF ENNHAGGDAA
0301: SPSSPLAPSM SGSSSQDSIV EPVSKLTSDG KLNHYSSGSS VIVEISNLNK VKESYMEDSL QDPKRKVHKP VKGVLRLEVE KLHNDRNEVD TISEGGSITN
0401: ELHDGELNNG RHSRNSVDGV HSSLNSSAIV KKDTHQNGQS SNAENGNNFQ AFDFRMMARS EPFSQLFHCL YVYPLTVSLS RKRNLFVRVE LRKDDSDIRK
0501: LPVEAVHPRD QNTTLQKCAH TQISVGTRMS CYHDEVKISL PALLTPQHHL LFTFFHVDLQ MKLEAPKPVI VGYAALPLST HIQLLSDVSL PILRELVPHY
0601: LQESGKERVD YLEDGKTVFR LRLRLCSSLF PVNERIRDFF VEYDRHTLHT SPPWGSELLE AINSLKNVES TALLQFLQPI LNMLLHLIGD GGETLQVAAF
0701: RAMVNILTRV QQESSDGAER NKFLVNYVDF AFDDFGDRQT PVYPGLSTVW GSLARSKAKG YRVGPVYDDV LAMAWFFLEL IVKSMGLEQS RLFYHNLPLG
0801: EDVPPLQLKE GVFRCIMQLF DCLLTEVHER CKKGLNLAKR LNSTLAFFCY DLLSIIEPRQ VFELVSLYMD KFAGVCQSVL HDCKLTFLQI ICDHDLFVEM
0901: PGRDPTDRNY LSSVLIQEIF LTLDHDDLSQ RAKAARILVV LICKHEFDAR YQKSEDKLYI AQLYFPLIGQ ILDEMPVFYN LNAIEKREVL VVILQIIRNL
1001: DDTTLIKAWQ QSIARTRLFF KLLEECITHF EHNRTGDSLL LGSSSRSPDA ERPASPKYSD RLSPSVNAYL SEASRHEIRP QGTPENGYMW NRISPQLSSP
1101: NQPYSLREAL AQAQSSRIGS TARALRESLH PILRQKLELW EENLSTAVSL EVLGIIEKFS VAAASRSIST DYAKLDCVTS ILMGLLSRSQ PLTFWKAFLP
1201: VVYNIFSLHG ATLMARENDR FLKQIAFHLL RLAVFQNDSV RKRAVVGLQI LVRNSFNYFK STTRLRVMLT ITLSELLSDV QVTQMKSDGS LEESGEARRL
1301: RKSLEEMADV RSKDQLNDCG LPVTALEVAA EGSTDNRWSW VEVKHLSKCL VQALDAGLEH ALLGSVMSVD RCAAAEGFYK LALAYAPVPD LHIMWLLHLC
1401: DAHQEMQSWA EAAQCAVAVA GVIMQALVGR NDAVWSKEHV ASLCRICPIV GTDIGAEVAA AEVEGYGASK LTVDSAVKYL QLANKLFAQA ELYHFSASIQ
1501: ELIIPVYKSR RSYGQLAKCH TSLTNIYESI LEQEASPIPF IDATYYRVGF YGERFGKLNK KEYVFREPRD VRLGDIMEKL SHTYEAKMDV NHTLHIIPDS
1601: RQVNADELQP GVCYLQITAV DPVMEDEDLE SRRERIFSLS TGSVRARVFD RFLFDTPFTK NGKTQGGLED QWKRRTVLQT EGSFPALVNR LVVIKSESLE
1701: FSPVENAIGM IETRTAALRN ELEEPRSSEG DQLPRLQSLQ RILQGSVAVQ VNSGVLSVCT AFLSGEPATR LRSQELQQLI AALLEFMAVC KRAIRVHFRL
1801: IGEEDQEFHT QLVNGFQSLT AELSHYIPAI LSEL
0101: DDMPSTSGRQ ISETEPSASS SKKHCTLSPL PAYEPAFDWD NERSLIFGQR LPESLPATHN SGLKITVKVL SLSFQAGLVE PFSGTICLYN RDRREKLSED
0201: FYFHILPTEM QDAHISLDRR GVFSLDTPSP SICLLIQLEK AATEEGGVTP SIYSRKEPVH LTEKEKQKLQ VWSRVMPYRE PFAWAMIPLF ENNHAGGDAA
0301: SPSSPLAPSM SGSSSQDSIV EPVSKLTSDG KLNHYSSGSS VIVEISNLNK VKESYMEDSL QDPKRKVHKP VKGVLRLEVE KLHNDRNEVD TISEGGSITN
0401: ELHDGELNNG RHSRNSVDGV HSSLNSSAIV KKDTHQNGQS SNAENGNNFQ AFDFRMMARS EPFSQLFHCL YVYPLTVSLS RKRNLFVRVE LRKDDSDIRK
0501: LPVEAVHPRD QNTTLQKCAH TQISVGTRMS CYHDEVKISL PALLTPQHHL LFTFFHVDLQ MKLEAPKPVI VGYAALPLST HIQLLSDVSL PILRELVPHY
0601: LQESGKERVD YLEDGKTVFR LRLRLCSSLF PVNERIRDFF VEYDRHTLHT SPPWGSELLE AINSLKNVES TALLQFLQPI LNMLLHLIGD GGETLQVAAF
0701: RAMVNILTRV QQESSDGAER NKFLVNYVDF AFDDFGDRQT PVYPGLSTVW GSLARSKAKG YRVGPVYDDV LAMAWFFLEL IVKSMGLEQS RLFYHNLPLG
0801: EDVPPLQLKE GVFRCIMQLF DCLLTEVHER CKKGLNLAKR LNSTLAFFCY DLLSIIEPRQ VFELVSLYMD KFAGVCQSVL HDCKLTFLQI ICDHDLFVEM
0901: PGRDPTDRNY LSSVLIQEIF LTLDHDDLSQ RAKAARILVV LICKHEFDAR YQKSEDKLYI AQLYFPLIGQ ILDEMPVFYN LNAIEKREVL VVILQIIRNL
1001: DDTTLIKAWQ QSIARTRLFF KLLEECITHF EHNRTGDSLL LGSSSRSPDA ERPASPKYSD RLSPSVNAYL SEASRHEIRP QGTPENGYMW NRISPQLSSP
1101: NQPYSLREAL AQAQSSRIGS TARALRESLH PILRQKLELW EENLSTAVSL EVLGIIEKFS VAAASRSIST DYAKLDCVTS ILMGLLSRSQ PLTFWKAFLP
1201: VVYNIFSLHG ATLMARENDR FLKQIAFHLL RLAVFQNDSV RKRAVVGLQI LVRNSFNYFK STTRLRVMLT ITLSELLSDV QVTQMKSDGS LEESGEARRL
1301: RKSLEEMADV RSKDQLNDCG LPVTALEVAA EGSTDNRWSW VEVKHLSKCL VQALDAGLEH ALLGSVMSVD RCAAAEGFYK LALAYAPVPD LHIMWLLHLC
1401: DAHQEMQSWA EAAQCAVAVA GVIMQALVGR NDAVWSKEHV ASLCRICPIV GTDIGAEVAA AEVEGYGASK LTVDSAVKYL QLANKLFAQA ELYHFSASIQ
1501: ELIIPVYKSR RSYGQLAKCH TSLTNIYESI LEQEASPIPF IDATYYRVGF YGERFGKLNK KEYVFREPRD VRLGDIMEKL SHTYEAKMDV NHTLHIIPDS
1601: RQVNADELQP GVCYLQITAV DPVMEDEDLE SRRERIFSLS TGSVRARVFD RFLFDTPFTK NGKTQGGLED QWKRRTVLQT EGSFPALVNR LVVIKSESLE
1701: FSPVENAIGM IETRTAALRN ELEEPRSSEG DQLPRLQSLQ RILQGSVAVQ VNSGVLSVCT AFLSGEPATR LRSQELQQLI AALLEFMAVC KRAIRVHFRL
1801: IGEEDQEFHT QLVNGFQSLT AELSHYIPAI LSEL
0001: MENNNLGLRF RKLPRQPLAL PKLDPLLDEN LEQWPHLNQL VQCYGTEWVK DVNKYGHYEN IRPDSFQTQI FEGPDTDTET EIRLASARSA TIEEDVASIS
0101: GRPFSDPGSS KHFGQPPLPA YEPAFDWENE RAMIFGQRTP ESPAASYSSG LKISVRVLSL AFQSGLVEPF FGSIALYNQE RKEKLSEDFY FQIQPTEMQD
0201: AKLSSENRGV FYLDAPSASV CLLIQLEKTA TEEGGVTSSV YSRKEPVHLT EREKQKLQVW SRIMPYRESF AWAVVPLFDN NLTTNTGESA SPSSPLAPSM
0301: TASSSHDGVY EPIAKITSDG KQGYSGGSSV VVEISNLNKV KESYSEESIQ DPKRKVHKPV KGVLRLEIEK HRNGHGDFED LSENGSIIND SLDPTDRLSD
0401: LTLMKCPSSS SGGPRNGCSK WNSEDAKDVS RNLTSSCGTP DLNCYHAFDF CSTTRNEPFL HLFHCLYVYP VAVTLSRKRN PFIRVELRKD DTDIRKQPLE
0501: AIYPREPGVS LQKWVHTQVA VGARAASYHD EIKVSLPATW TPSHHLLFTF FHVDLQTKLE APRPVVVGYA SLPLSTYIHS RSDISLPVMR ELVPHYLQES
0601: TKERLDYLED GKNIFKLRLR LCSSLYPTNE RVRDFCLEYD RHTLQTRPPW GSELLQAINS LKHVDSTALL QFLYPILNML LHLIGNGGET LQVAAFRAMV
0701: DILTRVQQVS FDDADRNRFL VTYVDYSFDD FGGNQPPVYP GLATVWGSLA RSKAKGYRVG PVYDDVLSMA WFFLELIVKS MALEQARLYD HNLPTGEDVP
0801: PMQLKESVFR CIMQLFDCLL TEVHERCKKG LSLAKRLNSS LAFFCYDLLY IIEPCQVYEL VSLYMDKFSG VCQSVLHECK LTFLQIISDH DLFVEMPGRD
0901: PSDRNYLSSI LIQELFLSLD HDELPLRAKG ARILVILLCK HEFDARYQKA EDKLYIAQLY FPFVGQILDE MPVFYNLNAT EKREVLIGVL QIVRNLDDTS
1001: LVKAWQQSIA RTRLYFKLME ECLILFEHKK AADSILGGNN SRGPVSEGAG SPKYSERLSP AINNYLSEAS RQEVRLEGTP DNGYLWQRVN SQLASPSQPY
1101: SLREALAQAQ SSRIGASAQA LRESLHPILR QKLELWEENV SATVSLQVLE ITENFSSMAA SHNIATDYGK LDCITTILTS FFSRNQSLAF WKAFFPIFNR
1201: IFDLHGATLM ARENDRFLKQ IAFHLLRLAV YRNDSVRKRA VIGLQILVKS SLYFMQTARL RALLTITLSE LMSDVQVTHM KSDNTLEESG EARRLQQSLS
1301: EMADEAKSVN LLRECGLPDD TLLIIPEKFT ENRWSWAEVK HLSDSLVLAL DASLGHALLG SVMAMDRYAA AESFYKLGMA FAPVPDLHIM WLLHLCDAHQ
1401: EMQSWAEAAQ CAVAVAGVIM QALVARNDGV WSKDHVSALR KICPMVSGEF TTEASAAEVE GYGASKLTVD SAVKYLQLAN KLFSQAELYH FCASILELVI
1501: PVYKSRKAYG QLAKCHTLLT NIYESILDQE SNPIPFIDAT YYRVGFYGEK FGKLDRKEYV YREPRDVRLG DIMEKLSHIY ESRMDSNHIL HIIPDSRQVK
1601: AEDLQAGVCY LQITAVDAVM EDEDLGSRRE RIFSLSTGSV RARVFDRFLF DTPFTKNGKT QGGLEDQWKR RTVLQTEGSF PALVNRLLVT KSESLEFSPV
1701: ENAIGMIETR TTALRNELEE PRSSDGDHLP RLQSLQRILQ GSVAVQVNSG VLSVCTAFLS GEPATRLRSQ ELQQLIAALL EFMAVCKRAI RVHFRLIGEE
1801: DQEFHTQLVN GFQSLTAELS HYIPAILSEL
0101: GRPFSDPGSS KHFGQPPLPA YEPAFDWENE RAMIFGQRTP ESPAASYSSG LKISVRVLSL AFQSGLVEPF FGSIALYNQE RKEKLSEDFY FQIQPTEMQD
0201: AKLSSENRGV FYLDAPSASV CLLIQLEKTA TEEGGVTSSV YSRKEPVHLT EREKQKLQVW SRIMPYRESF AWAVVPLFDN NLTTNTGESA SPSSPLAPSM
0301: TASSSHDGVY EPIAKITSDG KQGYSGGSSV VVEISNLNKV KESYSEESIQ DPKRKVHKPV KGVLRLEIEK HRNGHGDFED LSENGSIIND SLDPTDRLSD
0401: LTLMKCPSSS SGGPRNGCSK WNSEDAKDVS RNLTSSCGTP DLNCYHAFDF CSTTRNEPFL HLFHCLYVYP VAVTLSRKRN PFIRVELRKD DTDIRKQPLE
0501: AIYPREPGVS LQKWVHTQVA VGARAASYHD EIKVSLPATW TPSHHLLFTF FHVDLQTKLE APRPVVVGYA SLPLSTYIHS RSDISLPVMR ELVPHYLQES
0601: TKERLDYLED GKNIFKLRLR LCSSLYPTNE RVRDFCLEYD RHTLQTRPPW GSELLQAINS LKHVDSTALL QFLYPILNML LHLIGNGGET LQVAAFRAMV
0701: DILTRVQQVS FDDADRNRFL VTYVDYSFDD FGGNQPPVYP GLATVWGSLA RSKAKGYRVG PVYDDVLSMA WFFLELIVKS MALEQARLYD HNLPTGEDVP
0801: PMQLKESVFR CIMQLFDCLL TEVHERCKKG LSLAKRLNSS LAFFCYDLLY IIEPCQVYEL VSLYMDKFSG VCQSVLHECK LTFLQIISDH DLFVEMPGRD
0901: PSDRNYLSSI LIQELFLSLD HDELPLRAKG ARILVILLCK HEFDARYQKA EDKLYIAQLY FPFVGQILDE MPVFYNLNAT EKREVLIGVL QIVRNLDDTS
1001: LVKAWQQSIA RTRLYFKLME ECLILFEHKK AADSILGGNN SRGPVSEGAG SPKYSERLSP AINNYLSEAS RQEVRLEGTP DNGYLWQRVN SQLASPSQPY
1101: SLREALAQAQ SSRIGASAQA LRESLHPILR QKLELWEENV SATVSLQVLE ITENFSSMAA SHNIATDYGK LDCITTILTS FFSRNQSLAF WKAFFPIFNR
1201: IFDLHGATLM ARENDRFLKQ IAFHLLRLAV YRNDSVRKRA VIGLQILVKS SLYFMQTARL RALLTITLSE LMSDVQVTHM KSDNTLEESG EARRLQQSLS
1301: EMADEAKSVN LLRECGLPDD TLLIIPEKFT ENRWSWAEVK HLSDSLVLAL DASLGHALLG SVMAMDRYAA AESFYKLGMA FAPVPDLHIM WLLHLCDAHQ
1401: EMQSWAEAAQ CAVAVAGVIM QALVARNDGV WSKDHVSALR KICPMVSGEF TTEASAAEVE GYGASKLTVD SAVKYLQLAN KLFSQAELYH FCASILELVI
1501: PVYKSRKAYG QLAKCHTLLT NIYESILDQE SNPIPFIDAT YYRVGFYGEK FGKLDRKEYV YREPRDVRLG DIMEKLSHIY ESRMDSNHIL HIIPDSRQVK
1601: AEDLQAGVCY LQITAVDAVM EDEDLGSRRE RIFSLSTGSV RARVFDRFLF DTPFTKNGKT QGGLEDQWKR RTVLQTEGSF PALVNRLLVT KSESLEFSPV
1701: ENAIGMIETR TTALRNELEE PRSSDGDHLP RLQSLQRILQ GSVAVQVNSG VLSVCTAFLS GEPATRLRSQ ELQQLIAALL EFMAVCKRAI RVHFRLIGEE
1801: DQEFHTQLVN GFQSLTAELS HYIPAILSEL
Arabidopsis Description
SPK1Guanine nucleotide exchange factor SPIKE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8SAB7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.