Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
27297264
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0328000-01 | Rice | plasma membrane | 15.01 | 98.58 |
| Zm00001d012342_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 12.3 | 97.84 |
| KXG39465 | Sorghum | cytosol | 96.1 | 96.47 |
| Zm00001d029004_P004 | Maize | cytosol | 95.56 | 94.58 |
| Zm00001d024153_P001 | Maize | cytosol | 7.69 | 93.42 |
| HORVU4Hr1G051250.3 | Barley | cytosol | 90.36 | 90.95 |
| TraesCS4B01G173500.4 | Wheat | cytosol | 90.09 | 90.63 |
| TraesCS4A01G131100.1 | Wheat | cytosol | 90.09 | 90.63 |
| TraesCS4D01G175600.4 | Wheat | cytosol | 89.98 | 90.52 |
| GSMUA_Achr10P... | Banana | extracellular | 50.22 | 87.37 |
| Zm00001d035539_P001 | Maize | cytosol | 9.53 | 85.85 |
| Solyc08g016060.1.1 | Tomato | extracellular | 12.89 | 83.51 |
| Solyc08g016050.2.1 | Tomato | nucleus | 39.87 | 81.24 |
| VIT_11s0016g00100.t01 | Wine grape | mitochondrion | 78.66 | 78.61 |
| KRH43411 | Soybean | endoplasmic reticulum | 75.57 | 76.02 |
| KRH13046 | Soybean | endoplasmic reticulum | 75.41 | 75.86 |
| AT4G16340.1 | Thale cress | cytosol | 74.54 | 75.19 |
| CDY32235 | Canola | cytosol | 73.73 | 74.62 |
| GSMUA_Achr10P... | Banana | cytosol | 31.2 | 71.29 |
| CDY34451 | Canola | endoplasmic reticulum | 72.86 | 71.24 |
| Bra038448.1-P | Field mustard | cytosol | 73.29 | 65.3 |
| Zm00001d042645_P001 | Maize | cytosol, nucleus, peroxisome | 20.37 | 64.05 |
| Solyc08g016070.1.1 | Tomato | mitochondrion | 20.8 | 62.54 |
| Zm00001d007384_P003 | Maize | cytosol, endoplasmic reticulum, peroxisome | 7.96 | 41.06 |
| Zm00001d035534_P003 | Maize | cytosol | 8.61 | 33.62 |
| Zm00001d046856_P002 | Maize | endoplasmic reticulum, nucleus, peroxisome | 9.32 | 32.27 |
| Zm00001d038664_P001 | Maize | cytosol, nucleus, plastid | 8.67 | 29.91 |
Protein Annotations
| Gene3D:1.20.58.740 | Gene3D:1.25.40.410 | MapMan:27.4.3.2 | UniProt:A0A1D6PBC1 | ProteinID:AQL06949.1 | InterPro:ARM-type_fold |
| ncoils:Coil | InterPro:DHR-1_domain | InterPro:DHR-2 | InterPro:DOCK | InterPro:DOCK_C | GO:GO:0003674 |
| GO:GO:0005085 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0065009 |
| InterPro:IPR027007 | InterPro:IPR027357 | PFAM:PF06920 | PFAM:PF14429 | PFscan:PS51650 | PFscan:PS51651 |
| PANTHER:PTHR23317 | PANTHER:PTHR23317:SF76 | SUPFAM:SSF48371 | UniParc:UPI00084584E7 | EnsemblPlantsGene:Zm00001d047540 | EnsemblPlants:Zm00001d047540_P001 |
| EnsemblPlants:Zm00001d047540_T001 | SEG:seg | : | : | : | : |
Description
Guanine nucleotide exchange factor SPIKE 1
Coordinates
chr9:-:134441983..134470559
Molecular Weight (calculated)
207698.0 Da
IEP (calculated)
6.316
GRAVY (calculated)
-0.208
Length
1846 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTGQVTVMEP AVATAGEGQR FKRISRQAWS GNLELDPLLN ESLDQWPHLN DLVQCYKADF VKDDCKYGRY ESVAPPSFQN QIFEGPDTDI ETELQLCNAR
0101: HFKPEDPTED DMPSTSGRQM YETESSASSS KVHCSLSPLP AYEPAFDWEN ERSLIFGQRV PESIPAISNS GLKITVKVLS LSFQAGLVEP FSGTICLYNR
0201: DRREKLSEDF YFHILPTDMQ DAQGSLDRRG VFSLDTPSPS VCLLIQLEKA ATEEGGVTPS VYSRKEPVHL AEKEKQKLQV WSRIMPCKES FAWAMIPLFE
0301: GNHAGGLSDA ASPSSPLATS LPGSTSQDSI VDPILKLTLD GKVNHYSSGS SVIVEISNLN KVKESYIVDS LQDPKRKVHK PVKGVLRLEV EKLHGGHNDV
0401: DNTSEGGSMA NDLNDAGDIN NGRSNRSSFD GIHSFVNSIA IAQKDAHHNG IISNAENGDN FEAFDFRMLT RSEPFSQLFH CLYVYPLTVS LSRKRNLFVR
0501: VELRKDDSDI RKPPLEAVHP RERNMMLQKW GHTQIAVGTR MASYHDEVKI SLPALLTPQH HLVFTFFHVD LQMKLEAPKP VIVGHSVLPL STHIQLLSDV
0601: SLPILRELVP HYLQGSGKER MDYLEDGKTV FKLRLRLCSS LFPVNERIRD FFVEYDRHTL HTSPPWGSEL LEAINSLKNV ESTALLQFLQ PILNMLLHLI
0701: GDGGETLQVA AFRAMVNILT RVQQESSDGA ERNRFLINYV DFAFDDFGGR QAPVYPGLST VWGSLARSKA KGYRVGPVYD DVLAMAWFFL ELIVKSMGLE
0801: QSRLFYHNLP LGEDVPPLQL KEGVFRCIMQ LFDCLLTEVH ERCKKGLSLA KRLNSTLAFF CYDLLSIIEP RQVFELVSLY MDKFAGVCQA VLHDCKLTFL
0901: QIICDHDLFV EMPGRDPSDR NYLSSVLIQE IFLTLDHDDL SQRAKAARIL VVLICKHEFD ARYQKSEDKL YIAQLYFSLI GQILDEMPVF YNLNAIEKRE
1001: VLVVILQIVR NLDDATLIKA WQQSIARTRL FFKLLEECIT HFEHNKTGGS MLLGASSRSP DVERPAPPKY SERLSPSVNA YLSEASRHEI RPQGTPENGY
1101: MWNRVSPQLS SPNQPYSLRE ALAQAQSSRI GSTARALRES LHPVLRQKLE LWEENLSTAV SLEVLRITEK FSAAAGTRSI TTDYAKLDCV TSIVMGLLSR
1201: SQPLAFWKAF LPVVYNIFNL HGATLMAREN DRFLKQIAFH LLRLAVFRND SIRKRAVVGL QILVRNAFNY FKNTTRLRVM LTITLSELLS DVQVTQMKSD
1301: GSLEESGEAR RLRKSLEEMA DVRSKDLLKD CGLPVTALEA APDGSSDNMW SWAEVKHLSK CLVQALDAGL EHALLDSVVT VDRYAAAEGF YKLAMAYAPV
1401: PDLHIMWLQH LCDAHQEMQS WAEAAQCAVA AAGVIMQALV GRNDAVWSKE HVTSLHKICP IVNTDVSAEA SAAEVEGYGA SKLTVDSAVK YLQLANKLFT
1501: QAELYHFCAS IQELIIPVYK SRRAYGQLAK CHTSLTNIYE SILEQEASPI PFIDATYYRV GFYGERFGKL NKKEYVFREP RDVRLGDIME KLSHIYEVKM
1601: DGSHTLHIIP DSRQVNADEL QPGVCYLQIT AVDPVMEDED LGSRRERIFS LSTGTVRARV FDRFLFDTPF TKNGKTQGGL EDQWKRRTVL QTEGSFPALV
1701: NRLPVTKSES LEFSPVENAI GMIETRTAAL RNELEEPRSS EGDQLPRLQS LQRILQGSVA VQVNSGVLSV CTAFLSGEPA TRLRSQELQQ LIAALLEFMA
1801: VCKRAIRVHF RLIGEEDQEF HTQLVNGFQS LTAELSHYIP AILSEL
0101: HFKPEDPTED DMPSTSGRQM YETESSASSS KVHCSLSPLP AYEPAFDWEN ERSLIFGQRV PESIPAISNS GLKITVKVLS LSFQAGLVEP FSGTICLYNR
0201: DRREKLSEDF YFHILPTDMQ DAQGSLDRRG VFSLDTPSPS VCLLIQLEKA ATEEGGVTPS VYSRKEPVHL AEKEKQKLQV WSRIMPCKES FAWAMIPLFE
0301: GNHAGGLSDA ASPSSPLATS LPGSTSQDSI VDPILKLTLD GKVNHYSSGS SVIVEISNLN KVKESYIVDS LQDPKRKVHK PVKGVLRLEV EKLHGGHNDV
0401: DNTSEGGSMA NDLNDAGDIN NGRSNRSSFD GIHSFVNSIA IAQKDAHHNG IISNAENGDN FEAFDFRMLT RSEPFSQLFH CLYVYPLTVS LSRKRNLFVR
0501: VELRKDDSDI RKPPLEAVHP RERNMMLQKW GHTQIAVGTR MASYHDEVKI SLPALLTPQH HLVFTFFHVD LQMKLEAPKP VIVGHSVLPL STHIQLLSDV
0601: SLPILRELVP HYLQGSGKER MDYLEDGKTV FKLRLRLCSS LFPVNERIRD FFVEYDRHTL HTSPPWGSEL LEAINSLKNV ESTALLQFLQ PILNMLLHLI
0701: GDGGETLQVA AFRAMVNILT RVQQESSDGA ERNRFLINYV DFAFDDFGGR QAPVYPGLST VWGSLARSKA KGYRVGPVYD DVLAMAWFFL ELIVKSMGLE
0801: QSRLFYHNLP LGEDVPPLQL KEGVFRCIMQ LFDCLLTEVH ERCKKGLSLA KRLNSTLAFF CYDLLSIIEP RQVFELVSLY MDKFAGVCQA VLHDCKLTFL
0901: QIICDHDLFV EMPGRDPSDR NYLSSVLIQE IFLTLDHDDL SQRAKAARIL VVLICKHEFD ARYQKSEDKL YIAQLYFSLI GQILDEMPVF YNLNAIEKRE
1001: VLVVILQIVR NLDDATLIKA WQQSIARTRL FFKLLEECIT HFEHNKTGGS MLLGASSRSP DVERPAPPKY SERLSPSVNA YLSEASRHEI RPQGTPENGY
1101: MWNRVSPQLS SPNQPYSLRE ALAQAQSSRI GSTARALRES LHPVLRQKLE LWEENLSTAV SLEVLRITEK FSAAAGTRSI TTDYAKLDCV TSIVMGLLSR
1201: SQPLAFWKAF LPVVYNIFNL HGATLMAREN DRFLKQIAFH LLRLAVFRND SIRKRAVVGL QILVRNAFNY FKNTTRLRVM LTITLSELLS DVQVTQMKSD
1301: GSLEESGEAR RLRKSLEEMA DVRSKDLLKD CGLPVTALEA APDGSSDNMW SWAEVKHLSK CLVQALDAGL EHALLDSVVT VDRYAAAEGF YKLAMAYAPV
1401: PDLHIMWLQH LCDAHQEMQS WAEAAQCAVA AAGVIMQALV GRNDAVWSKE HVTSLHKICP IVNTDVSAEA SAAEVEGYGA SKLTVDSAVK YLQLANKLFT
1501: QAELYHFCAS IQELIIPVYK SRRAYGQLAK CHTSLTNIYE SILEQEASPI PFIDATYYRV GFYGERFGKL NKKEYVFREP RDVRLGDIME KLSHIYEVKM
1601: DGSHTLHIIP DSRQVNADEL QPGVCYLQIT AVDPVMEDED LGSRRERIFS LSTGTVRARV FDRFLFDTPF TKNGKTQGGL EDQWKRRTVL QTEGSFPALV
1701: NRLPVTKSES LEFSPVENAI GMIETRTAAL RNELEEPRSS EGDQLPRLQS LQRILQGSVA VQVNSGVLSV CTAFLSGEPA TRLRSQELQQ LIAALLEFMA
1801: VCKRAIRVHF RLIGEEDQEF HTQLVNGFQS LTAELSHYIP AILSEL
0001: MENNNLGLRF RKLPRQPLAL PKLDPLLDEN LEQWPHLNQL VQCYGTEWVK DVNKYGHYEN IRPDSFQTQI FEGPDTDTET EIRLASARSA TIEEDVASIS
0101: GRPFSDPGSS KHFGQPPLPA YEPAFDWENE RAMIFGQRTP ESPAASYSSG LKISVRVLSL AFQSGLVEPF FGSIALYNQE RKEKLSEDFY FQIQPTEMQD
0201: AKLSSENRGV FYLDAPSASV CLLIQLEKTA TEEGGVTSSV YSRKEPVHLT EREKQKLQVW SRIMPYRESF AWAVVPLFDN NLTTNTGESA SPSSPLAPSM
0301: TASSSHDGVY EPIAKITSDG KQGYSGGSSV VVEISNLNKV KESYSEESIQ DPKRKVHKPV KGVLRLEIEK HRNGHGDFED LSENGSIIND SLDPTDRLSD
0401: LTLMKCPSSS SGGPRNGCSK WNSEDAKDVS RNLTSSCGTP DLNCYHAFDF CSTTRNEPFL HLFHCLYVYP VAVTLSRKRN PFIRVELRKD DTDIRKQPLE
0501: AIYPREPGVS LQKWVHTQVA VGARAASYHD EIKVSLPATW TPSHHLLFTF FHVDLQTKLE APRPVVVGYA SLPLSTYIHS RSDISLPVMR ELVPHYLQES
0601: TKERLDYLED GKNIFKLRLR LCSSLYPTNE RVRDFCLEYD RHTLQTRPPW GSELLQAINS LKHVDSTALL QFLYPILNML LHLIGNGGET LQVAAFRAMV
0701: DILTRVQQVS FDDADRNRFL VTYVDYSFDD FGGNQPPVYP GLATVWGSLA RSKAKGYRVG PVYDDVLSMA WFFLELIVKS MALEQARLYD HNLPTGEDVP
0801: PMQLKESVFR CIMQLFDCLL TEVHERCKKG LSLAKRLNSS LAFFCYDLLY IIEPCQVYEL VSLYMDKFSG VCQSVLHECK LTFLQIISDH DLFVEMPGRD
0901: PSDRNYLSSI LIQELFLSLD HDELPLRAKG ARILVILLCK HEFDARYQKA EDKLYIAQLY FPFVGQILDE MPVFYNLNAT EKREVLIGVL QIVRNLDDTS
1001: LVKAWQQSIA RTRLYFKLME ECLILFEHKK AADSILGGNN SRGPVSEGAG SPKYSERLSP AINNYLSEAS RQEVRLEGTP DNGYLWQRVN SQLASPSQPY
1101: SLREALAQAQ SSRIGASAQA LRESLHPILR QKLELWEENV SATVSLQVLE ITENFSSMAA SHNIATDYGK LDCITTILTS FFSRNQSLAF WKAFFPIFNR
1201: IFDLHGATLM ARENDRFLKQ IAFHLLRLAV YRNDSVRKRA VIGLQILVKS SLYFMQTARL RALLTITLSE LMSDVQVTHM KSDNTLEESG EARRLQQSLS
1301: EMADEAKSVN LLRECGLPDD TLLIIPEKFT ENRWSWAEVK HLSDSLVLAL DASLGHALLG SVMAMDRYAA AESFYKLGMA FAPVPDLHIM WLLHLCDAHQ
1401: EMQSWAEAAQ CAVAVAGVIM QALVARNDGV WSKDHVSALR KICPMVSGEF TTEASAAEVE GYGASKLTVD SAVKYLQLAN KLFSQAELYH FCASILELVI
1501: PVYKSRKAYG QLAKCHTLLT NIYESILDQE SNPIPFIDAT YYRVGFYGEK FGKLDRKEYV YREPRDVRLG DIMEKLSHIY ESRMDSNHIL HIIPDSRQVK
1601: AEDLQAGVCY LQITAVDAVM EDEDLGSRRE RIFSLSTGSV RARVFDRFLF DTPFTKNGKT QGGLEDQWKR RTVLQTEGSF PALVNRLLVT KSESLEFSPV
1701: ENAIGMIETR TTALRNELEE PRSSDGDHLP RLQSLQRILQ GSVAVQVNSG VLSVCTAFLS GEPATRLRSQ ELQQLIAALL EFMAVCKRAI RVHFRLIGEE
1801: DQEFHTQLVN GFQSLTAELS HYIPAILSEL
0101: GRPFSDPGSS KHFGQPPLPA YEPAFDWENE RAMIFGQRTP ESPAASYSSG LKISVRVLSL AFQSGLVEPF FGSIALYNQE RKEKLSEDFY FQIQPTEMQD
0201: AKLSSENRGV FYLDAPSASV CLLIQLEKTA TEEGGVTSSV YSRKEPVHLT EREKQKLQVW SRIMPYRESF AWAVVPLFDN NLTTNTGESA SPSSPLAPSM
0301: TASSSHDGVY EPIAKITSDG KQGYSGGSSV VVEISNLNKV KESYSEESIQ DPKRKVHKPV KGVLRLEIEK HRNGHGDFED LSENGSIIND SLDPTDRLSD
0401: LTLMKCPSSS SGGPRNGCSK WNSEDAKDVS RNLTSSCGTP DLNCYHAFDF CSTTRNEPFL HLFHCLYVYP VAVTLSRKRN PFIRVELRKD DTDIRKQPLE
0501: AIYPREPGVS LQKWVHTQVA VGARAASYHD EIKVSLPATW TPSHHLLFTF FHVDLQTKLE APRPVVVGYA SLPLSTYIHS RSDISLPVMR ELVPHYLQES
0601: TKERLDYLED GKNIFKLRLR LCSSLYPTNE RVRDFCLEYD RHTLQTRPPW GSELLQAINS LKHVDSTALL QFLYPILNML LHLIGNGGET LQVAAFRAMV
0701: DILTRVQQVS FDDADRNRFL VTYVDYSFDD FGGNQPPVYP GLATVWGSLA RSKAKGYRVG PVYDDVLSMA WFFLELIVKS MALEQARLYD HNLPTGEDVP
0801: PMQLKESVFR CIMQLFDCLL TEVHERCKKG LSLAKRLNSS LAFFCYDLLY IIEPCQVYEL VSLYMDKFSG VCQSVLHECK LTFLQIISDH DLFVEMPGRD
0901: PSDRNYLSSI LIQELFLSLD HDELPLRAKG ARILVILLCK HEFDARYQKA EDKLYIAQLY FPFVGQILDE MPVFYNLNAT EKREVLIGVL QIVRNLDDTS
1001: LVKAWQQSIA RTRLYFKLME ECLILFEHKK AADSILGGNN SRGPVSEGAG SPKYSERLSP AINNYLSEAS RQEVRLEGTP DNGYLWQRVN SQLASPSQPY
1101: SLREALAQAQ SSRIGASAQA LRESLHPILR QKLELWEENV SATVSLQVLE ITENFSSMAA SHNIATDYGK LDCITTILTS FFSRNQSLAF WKAFFPIFNR
1201: IFDLHGATLM ARENDRFLKQ IAFHLLRLAV YRNDSVRKRA VIGLQILVKS SLYFMQTARL RALLTITLSE LMSDVQVTHM KSDNTLEESG EARRLQQSLS
1301: EMADEAKSVN LLRECGLPDD TLLIIPEKFT ENRWSWAEVK HLSDSLVLAL DASLGHALLG SVMAMDRYAA AESFYKLGMA FAPVPDLHIM WLLHLCDAHQ
1401: EMQSWAEAAQ CAVAVAGVIM QALVARNDGV WSKDHVSALR KICPMVSGEF TTEASAAEVE GYGASKLTVD SAVKYLQLAN KLFSQAELYH FCASILELVI
1501: PVYKSRKAYG QLAKCHTLLT NIYESILDQE SNPIPFIDAT YYRVGFYGEK FGKLDRKEYV YREPRDVRLG DIMEKLSHIY ESRMDSNHIL HIIPDSRQVK
1601: AEDLQAGVCY LQITAVDAVM EDEDLGSRRE RIFSLSTGSV RARVFDRFLF DTPFTKNGKT QGGLEDQWKR RTVLQTEGSF PALVNRLLVT KSESLEFSPV
1701: ENAIGMIETR TTALRNELEE PRSSDGDHLP RLQSLQRILQ GSVAVQVNSG VLSVCTAFLS GEPATRLRSQ ELQQLIAALL EFMAVCKRAI RVHFRLIGEE
1801: DQEFHTQLVN GFQSLTAELS HYIPAILSEL
Arabidopsis Description
SPK1Guanine nucleotide exchange factor SPIKE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8SAB7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.