Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG31590 | Sorghum | cytosol | 72.62 | 73.83 |
| TraesCS3B01G168100.1 | Wheat | cytosol | 51.76 | 56.23 |
| TraesCS3A01G134300.3 | Wheat | cytosol | 51.4 | 55.88 |
| TraesCS3D01G150600.1 | Wheat | cytosol | 51.04 | 55.49 |
| HORVU3Hr1G029210.3 | Barley | cytosol | 50.82 | 54.79 |
| Os01t0208600-01 | Rice | cytosol | 51.04 | 53.37 |
| Zm00001d025836_P001 | Maize | cytosol | 4.37 | 48.8 |
| Zm00001d025835_P001 | Maize | cytosol | 4.37 | 48.8 |
| Zm00001d032131_P001 | Maize | cytosol, extracellular, plastid | 4.87 | 47.22 |
| VIT_10s0003g01270.t01 | Wine grape | cytosol | 22.08 | 32.8 |
| GSMUA_AchrUn_... | Banana | cytosol | 25.23 | 30.8 |
| GSMUA_Achr10P... | Banana | cytosol | 26.16 | 30.72 |
| GSMUA_Achr2P15470_001 | Banana | nucleus | 23.01 | 29.45 |
| AT2G34150.2 | Thale cress | nucleus | 16.99 | 28.87 |
| CDY17225 | Canola | nucleus | 16.56 | 28.48 |
| CDY43322 | Canola | nucleus | 17.49 | 25.6 |
| Bra005450.1-P | Field mustard | nucleus | 16.2 | 25.45 |
| CDX90172 | Canola | nucleus | 17.42 | 25.31 |
| Bra010847.1-P | Field mustard | nucleus | 17.42 | 25.31 |
| AT1G29170.1 | Thale cress | nucleus | 18.06 | 24.71 |
| CDY63143 | Canola | nucleus | 15.27 | 23.99 |
| KRH42863 | Soybean | nucleus | 22.65 | 23.67 |
| Solyc02g076840.2.1 | Tomato | nucleus | 20.65 | 22.14 |
| CDX78876 | Canola | nucleus | 10.97 | 21.07 |
| KRH58965 | Soybean | nucleus | 13.91 | 19.6 |
| VIT_08s0058g00770.t01 | Wine grape | cytosol | 1.72 | 16.9 |
| Zm00001d022570_P001 | Maize | cytosol | 7.38 | 15.99 |
| Zm00001d028803_P002 | Maize | nucleus | 13.4 | 15.67 |
| Zm00001d047701_P002 | Maize | nucleus | 13.76 | 14.91 |
| CDX78875 | Canola | extracellular, vacuole | 8.67 | 14.77 |
| Zm00001d027498_P001 | Maize | mitochondrion | 2.72 | 13.87 |
| Zm00001d013353_P001 | Maize | nucleus | 3.66 | 12.41 |
| CDX99451 | Canola | nucleus | 14.48 | 10.6 |
| AT4G18600.1 | Thale cress | nucleus | 15.2 | 10.45 |
| Zm00001d034616_P001 | Maize | cytosol | 14.84 | 9.67 |
| Bra013329.1-P | Field mustard | nucleus | 14.27 | 8.69 |
Protein Annotations
| Gene3D:1.20.5.340 | MapMan:20.2.2.2.4 | UniProt:A0A1D6FGL9 | ProteinID:AQK90996.1 | GO:GO:0003674 | GO:GO:0003779 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030036 | InterPro:IPR003124 | PFscan:PS51082 |
| PANTHER:PTHR12902 | PANTHER:PTHR12902:SF1 | InterPro:SCAR/WAVE_fam | UniParc:UPI0008445EA9 | InterPro:WH2_dom | EnsemblPlantsGene:Zm00001d008906 |
| EnsemblPlants:Zm00001d008906_P003 | EnsemblPlants:Zm00001d008906_T003 | SEG:seg | : | : | : |
Description
Protein SCAR3
Coordinates
chr8:+:24723653..24730965
Molecular Weight (calculated)
151377.0 Da
IEP (calculated)
4.528
GRAVY (calculated)
-0.571
Length
1395 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPLVRFEVRN EVGLGDPGLY GGGAAAAAAA TAAAGEEEPK ALLEGVAVAG LVGILRQLGD LAEFAADVFH DLHEQVIATS ARGRKVLTRV QNIEAALPSL
0101: EKAVKNQKSH IHFAYVPGSD WHTQLQNEQN HLLATDLPRF MMDSFDNAGA GACVKRYSDP SYFKKAWDTM RADKNANVQR EKRSQKIKRK GSRLREPYHG
0201: QAMPRHRGTE FQRSLTAGQL VNRCCTSHTL RYNNFVSVII FYGCSLLIFE WHIQNSIFNS VFSSRQFASP SNDGQGISEH KSTPDARSNP DNMSRSSSLS
0301: SKTQLSSVEQ AIDTKPSAVS HENGHGKSLD TKLHKPGGLP SPVLLNSTTV DDHSDHLKQG SPPDGMVARS PYVKWDEKTA IIMSTSSIYC DDVVMDEVED
0401: AEPTCISSVQ KETDHKVMDT LHQQDALLKK TKSLLVPSVL NHHDDIPGEA DNYMDALNTL ESETETESEF QTKNRVPAPS FKAEAPQVGA IDNIVPQCLD
0501: SSAADFIDTC QESDIICTSE RAIDFPSLSN ADSLEVSQLE LSDYTSVSPY KESSVITNIH ESGAEGARGD PCEIIEPLQV HSAILANDGS PVCNEIPKSK
0601: PDDDLGYFQE IPQPGFSTCM VIPSNKESAV ANKNLEGDAE SDDDLIDGTA DNVVSGPKIA NMVVDEVGFK MAPANRSSPG DPSDDSCVIP ESRPQDYAVK
0701: SYEGVGDCGV TEVSKLCSEP LNKPSDNICA TQDVPTNTST MSAGASEVSS SWSEPVTELI DDRCATQGVP ANASTTSTVV PSVKLWTNAG LFGLEPSKPP
0801: VFGNGPREDT PPGFKEAQPV HSTEFTEVHC SKPTESAAVD VPNGNTSITS SFVEKLVGIR PGSANLNSSG ANQSAARIPD PIHSHTDGHS DFSSSFEHNN
0901: MTGKHTSISE LLEFEGSADT GTKIYSTDMR NNAVSASSFS SIAQRFLANT LQRRTSKYTD LPMSSERANA DTSAKSESTL NPVVEPSEAV FAEETKFENK
1001: TENGMDGLSK TSIFSSRHYS EKSSPPLEYM KISFHPMSAF EMSKLNLDFC DGNIHEISDD MMLPTFQLLS ESSIPQPGSG SESEDDTFGR SYSYSSYDDL
1101: SPRLYSNSEA WDQDDGTGLE EHELYDDSNQ IGSSTAPLSS YMGFEQMNLS DMKSDISLAN IGDQNVIGTL QSCTVEELPN FDTLMSRSDD QNGETPIPHN
1201: LGNMTPDEDQ LPPPPPLPPM QWRMTRQTTS LEEETCITTK DMLRKTSSLP HIHTSAQEEH CPPTAPLDLQ GHAGEVGVQK TGGVREITNP PSIIDIKSSL
1301: LQQIRDKSEQ LKLNGHERSK KAVGGDIKSL DEREELLQQI RSKTFNLRRT NASKADGSSQ STASSNVAAI LEKANAIRQA VASDEGGDDD TWSDI
0101: EKAVKNQKSH IHFAYVPGSD WHTQLQNEQN HLLATDLPRF MMDSFDNAGA GACVKRYSDP SYFKKAWDTM RADKNANVQR EKRSQKIKRK GSRLREPYHG
0201: QAMPRHRGTE FQRSLTAGQL VNRCCTSHTL RYNNFVSVII FYGCSLLIFE WHIQNSIFNS VFSSRQFASP SNDGQGISEH KSTPDARSNP DNMSRSSSLS
0301: SKTQLSSVEQ AIDTKPSAVS HENGHGKSLD TKLHKPGGLP SPVLLNSTTV DDHSDHLKQG SPPDGMVARS PYVKWDEKTA IIMSTSSIYC DDVVMDEVED
0401: AEPTCISSVQ KETDHKVMDT LHQQDALLKK TKSLLVPSVL NHHDDIPGEA DNYMDALNTL ESETETESEF QTKNRVPAPS FKAEAPQVGA IDNIVPQCLD
0501: SSAADFIDTC QESDIICTSE RAIDFPSLSN ADSLEVSQLE LSDYTSVSPY KESSVITNIH ESGAEGARGD PCEIIEPLQV HSAILANDGS PVCNEIPKSK
0601: PDDDLGYFQE IPQPGFSTCM VIPSNKESAV ANKNLEGDAE SDDDLIDGTA DNVVSGPKIA NMVVDEVGFK MAPANRSSPG DPSDDSCVIP ESRPQDYAVK
0701: SYEGVGDCGV TEVSKLCSEP LNKPSDNICA TQDVPTNTST MSAGASEVSS SWSEPVTELI DDRCATQGVP ANASTTSTVV PSVKLWTNAG LFGLEPSKPP
0801: VFGNGPREDT PPGFKEAQPV HSTEFTEVHC SKPTESAAVD VPNGNTSITS SFVEKLVGIR PGSANLNSSG ANQSAARIPD PIHSHTDGHS DFSSSFEHNN
0901: MTGKHTSISE LLEFEGSADT GTKIYSTDMR NNAVSASSFS SIAQRFLANT LQRRTSKYTD LPMSSERANA DTSAKSESTL NPVVEPSEAV FAEETKFENK
1001: TENGMDGLSK TSIFSSRHYS EKSSPPLEYM KISFHPMSAF EMSKLNLDFC DGNIHEISDD MMLPTFQLLS ESSIPQPGSG SESEDDTFGR SYSYSSYDDL
1101: SPRLYSNSEA WDQDDGTGLE EHELYDDSNQ IGSSTAPLSS YMGFEQMNLS DMKSDISLAN IGDQNVIGTL QSCTVEELPN FDTLMSRSDD QNGETPIPHN
1201: LGNMTPDEDQ LPPPPPLPPM QWRMTRQTTS LEEETCITTK DMLRKTSSLP HIHTSAQEEH CPPTAPLDLQ GHAGEVGVQK TGGVREITNP PSIIDIKSSL
1301: LQQIRDKSEQ LKLNGHERSK KAVGGDIKSL DEREELLQQI RSKTFNLRRT NASKADGSSQ STASSNVAAI LEKANAIRQA VASDEGGDDD TWSDI
0001: MPLVRFKIRN ELSLGGPEIQ RSASVEDEEP KAILGAVEVA GLIGILRQLG DLAEFSAEVF NGLQEEVTVT ASRCQKLTSR VRRIESALSP LEKAVLSQTS
0101: HIHFAYTAGS EWHPRIRNGH SHFVQSDLPL CVMESYEQCR DPPPLHLLDR FAVGGPGSCL RKYSDPTFFR KELSNPSKTD DIKVQRDQAH RKRKKKRLPQ
0201: RNICRSNAVS TSDETNGAHL SSFTDDRPTT SRSTSTVDMP RSSNMQDLSD IVDQSYLQGQ SGAQEQSEAQ VQSDFQESSK ARDSITGSGY IEYVINQSPV
0301: DKPEVKLVEG FLSGSLCPAD RIGSTVPEGC IEVVDDNILY SPSEDLLVPS ASNVCDEKKE TLESMVEKSR KDDEPSELHE SKFGPVTPDR VRQNQRDFDR
0401: TYILFDEVDI VGEKQSKSQA NNIDGTLGIE NEGEDKSEQE SEADEFVDAR NTIESESESD IDGVPKPKLE HYFGDISTYC SEDANSDNND GSEDITYEEM
0501: AHDPRHENSE DESCSGSYLP EDSNVSSCLS DPVCEETLFH DENSQKPWEF FTMCPSLLAE KAVPDVTILR EEPVMAHPLF AGDSANEKIS SEERIISCPS
0601: LKDAIPAEKI LPEEHLVNYP SLEAIPHEKI LPGESIAKYP SFAEIIPQEK ILSEKSLEEA VLDNMTPAGE PDAAHPSFPK AVQDKKISPE VLDSKIFSVP
0701: KAVSQEPISL EEFVRIHPCL AEAVPDERFL IEEPPSTCLS LTKAMPTEIL LPEKTLESSH YLEELPEEDI LQEKSVDSTH PSCAKAAAET NLSPEVLDST
0801: KLSVAEAVPQ EQVSLEEFVG INPCLVEAVP DERLLPEEPD TTYLSLTKAV AIEKVLSEEL LETYPSLAEL PEEEFLQEET DDATHTSEAV SDEEISQEVS
0901: DSTNLSLEEA LPLEHISHEE FVGIDQCLVE VAPEERFLPE EPVITCLSLT MEGVLSEKSP ETYPSLSELP EEKILDEEAD DAMHPCLSEA VSDEQSSPNV
1001: LGSTNSPVAE AVPQAQISVE EFVGIDPCLV EAVPDMRDLP EEHITSCIYL TNVVPIEEVL PEEPFEACAS LGKLPKDKIS QEESDEATHT LSCAKAESDE
1101: HVSLEVLNST NLSAAEAIPN EQVTLDEFVG IDPCLGEVVL DEEVLPEQLD TTCRSLTKAA PIMTIFPEEP PEVYPSLEEL PEEKIAQEEE VDDATHPYFS
1201: EAVCDEKIPP LEDPGSTHPS LEESVPYEEA SHEELVGTNP FLESAFPNEI GFPDEPGVTY RSSAEAVSKE KNLPEESLPT YPSWAEVVPD EKISREELDS
1301: TYPSSAEAVF DENISGSEAP GSTTETGRQN KTFPEKTFAT ENSLNEAVFD EKIPGSEAST STTETGPHNK TFPEEPFAME NFLNEAVFDE KIPGSEAPVS
1401: TTETGLHNET FTEEPVATDI SLNEAVFGEI IPGSEAPGSA TETGLHNKTF PEKPFATDLS LKEAVFDEKI PGSEASSSTT ETSPHNKTFP RETITTDLSS
1501: TEAVFDEKIT GSGVPSFTTE TGSHNKCFPE EPVPKENILP KEPAAAYLAL AEGIPDQKVF LDDAALLLFA EAIFDQKFSP EVPDSTYPSL KEPEMHVAAP
1601: CVVTDLPAKN IKVKEGEVHN EPYTASDVSM NQKSGLLEPE STERTFPSSG GTVTISPDTQ NSLPNGTSVE SISIWSNGGL LGLAPLKPPV FAEPNSGSQH
1701: IKHEINEASV LSTRKQESSS RSVENAEKSS LPLIVSDPTS QQQSNMSSLS PMQSTGTSFR VFGLSHRLLM AGFRGNSSST CKFESVPSSS YDTRVAAIED
1801: RTQQSPGGSS FEEQLDYESS LFGSPTSSPP VEHMKISFNP IEASPVPKLK LRIPCQPRYN GENADMFPSF QLVPEASNSD DGDDNSDTFC QSSPCVSDYC
1901: LSDSELWESD ESPRISVSSL KQVEERSRHG DMGSFSGSFL DLPCYDAVDH QSTFSRLEQE QVPEYKPSVS EIIRAWPPNQ PKSSPCNEAN VDANTVSKKT
2001: QDQSLGLVAT DDEGGDSVCL DEHKTKGI
0101: HIHFAYTAGS EWHPRIRNGH SHFVQSDLPL CVMESYEQCR DPPPLHLLDR FAVGGPGSCL RKYSDPTFFR KELSNPSKTD DIKVQRDQAH RKRKKKRLPQ
0201: RNICRSNAVS TSDETNGAHL SSFTDDRPTT SRSTSTVDMP RSSNMQDLSD IVDQSYLQGQ SGAQEQSEAQ VQSDFQESSK ARDSITGSGY IEYVINQSPV
0301: DKPEVKLVEG FLSGSLCPAD RIGSTVPEGC IEVVDDNILY SPSEDLLVPS ASNVCDEKKE TLESMVEKSR KDDEPSELHE SKFGPVTPDR VRQNQRDFDR
0401: TYILFDEVDI VGEKQSKSQA NNIDGTLGIE NEGEDKSEQE SEADEFVDAR NTIESESESD IDGVPKPKLE HYFGDISTYC SEDANSDNND GSEDITYEEM
0501: AHDPRHENSE DESCSGSYLP EDSNVSSCLS DPVCEETLFH DENSQKPWEF FTMCPSLLAE KAVPDVTILR EEPVMAHPLF AGDSANEKIS SEERIISCPS
0601: LKDAIPAEKI LPEEHLVNYP SLEAIPHEKI LPGESIAKYP SFAEIIPQEK ILSEKSLEEA VLDNMTPAGE PDAAHPSFPK AVQDKKISPE VLDSKIFSVP
0701: KAVSQEPISL EEFVRIHPCL AEAVPDERFL IEEPPSTCLS LTKAMPTEIL LPEKTLESSH YLEELPEEDI LQEKSVDSTH PSCAKAAAET NLSPEVLDST
0801: KLSVAEAVPQ EQVSLEEFVG INPCLVEAVP DERLLPEEPD TTYLSLTKAV AIEKVLSEEL LETYPSLAEL PEEEFLQEET DDATHTSEAV SDEEISQEVS
0901: DSTNLSLEEA LPLEHISHEE FVGIDQCLVE VAPEERFLPE EPVITCLSLT MEGVLSEKSP ETYPSLSELP EEKILDEEAD DAMHPCLSEA VSDEQSSPNV
1001: LGSTNSPVAE AVPQAQISVE EFVGIDPCLV EAVPDMRDLP EEHITSCIYL TNVVPIEEVL PEEPFEACAS LGKLPKDKIS QEESDEATHT LSCAKAESDE
1101: HVSLEVLNST NLSAAEAIPN EQVTLDEFVG IDPCLGEVVL DEEVLPEQLD TTCRSLTKAA PIMTIFPEEP PEVYPSLEEL PEEKIAQEEE VDDATHPYFS
1201: EAVCDEKIPP LEDPGSTHPS LEESVPYEEA SHEELVGTNP FLESAFPNEI GFPDEPGVTY RSSAEAVSKE KNLPEESLPT YPSWAEVVPD EKISREELDS
1301: TYPSSAEAVF DENISGSEAP GSTTETGRQN KTFPEKTFAT ENSLNEAVFD EKIPGSEAST STTETGPHNK TFPEEPFAME NFLNEAVFDE KIPGSEAPVS
1401: TTETGLHNET FTEEPVATDI SLNEAVFGEI IPGSEAPGSA TETGLHNKTF PEKPFATDLS LKEAVFDEKI PGSEASSSTT ETSPHNKTFP RETITTDLSS
1501: TEAVFDEKIT GSGVPSFTTE TGSHNKCFPE EPVPKENILP KEPAAAYLAL AEGIPDQKVF LDDAALLLFA EAIFDQKFSP EVPDSTYPSL KEPEMHVAAP
1601: CVVTDLPAKN IKVKEGEVHN EPYTASDVSM NQKSGLLEPE STERTFPSSG GTVTISPDTQ NSLPNGTSVE SISIWSNGGL LGLAPLKPPV FAEPNSGSQH
1701: IKHEINEASV LSTRKQESSS RSVENAEKSS LPLIVSDPTS QQQSNMSSLS PMQSTGTSFR VFGLSHRLLM AGFRGNSSST CKFESVPSSS YDTRVAAIED
1801: RTQQSPGGSS FEEQLDYESS LFGSPTSSPP VEHMKISFNP IEASPVPKLK LRIPCQPRYN GENADMFPSF QLVPEASNSD DGDDNSDTFC QSSPCVSDYC
1901: LSDSELWESD ESPRISVSSL KQVEERSRHG DMGSFSGSFL DLPCYDAVDH QSTFSRLEQE QVPEYKPSVS EIIRAWPPNQ PKSSPCNEAN VDANTVSKKT
2001: QDQSLGLVAT DDEGGDSVCL DEHKTKGI
Arabidopsis Description
WAVE5Scar-like domain-containing protein WAVE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPK0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.