Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17225 | Canola | nucleus | 69.71 | 76.33 |
| AT2G34150.2 | Thale cress | nucleus | 52.7 | 57.0 |
| Zm00001d025835_P001 | Maize | cytosol | 4.84 | 34.4 |
| Zm00001d025836_P001 | Maize | cytosol | 4.84 | 34.4 |
| Bra010847.1-P | Field mustard | nucleus | 36.71 | 33.96 |
| Zm00001d032131_P001 | Maize | cytosol, extracellular, plastid | 5.18 | 31.94 |
| KRH42863 | Soybean | nucleus | 31.64 | 21.05 |
| TraesCS3A01G134300.3 | Wheat | cytosol | 28.6 | 19.8 |
| Solyc02g076840.2.1 | Tomato | nucleus | 28.94 | 19.75 |
| GSMUA_AchrUn_... | Banana | cytosol | 25.34 | 19.68 |
| HORVU3Hr1G029210.3 | Barley | cytosol | 28.15 | 19.32 |
| TraesCS3D01G150600.1 | Wheat | cytosol | 27.82 | 19.25 |
| TraesCS3B01G168100.1 | Wheat | cytosol | 27.82 | 19.24 |
| GSMUA_Achr10P... | Banana | cytosol | 24.55 | 18.35 |
| GSMUA_Achr2P15470_001 | Banana | nucleus | 22.18 | 18.07 |
| Os01t0208600-01 | Rice | cytosol | 27.14 | 18.07 |
| KXG31590 | Sorghum | cytosol | 27.03 | 17.49 |
| VIT_08s0058g00770.t01 | Wine grape | cytosol | 2.7 | 16.9 |
| Zm00001d008906_P003 | Maize | cytosol | 25.45 | 16.2 |
| Bra005107.1-P | Field mustard | cytosol | 19.03 | 11.83 |
| Bra013329.1-P | Field mustard | nucleus | 19.59 | 7.59 |
Protein Annotations
| Gene3D:1.20.5.340 | Gene3D:1.20.58.1570 | MapMan:20.2.2.2.4 | EnsemblPlantsGene:Bra005450 | EnsemblPlants:Bra005450.1 | EnsemblPlants:Bra005450.1-P |
| GO:GO:0003674 | GO:GO:0003785 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 |
| GO:GO:0030036 | GO:GO:0043229 | GO:GO:0051127 | GO:GO:0071944 | UniProt:M4CML2 | PANTHER:PTHR12902 |
| PANTHER:PTHR12902:SF1 | InterPro:SCAR/WAVE_fam | UniParc:UPI0002548108 | SEG:seg | : | : |
Description
AT2G34150 (E=8e-257) WAVE1 | WAVE1; actin monomer binding
Coordinates
chrA05:+:5549216..5553044
Molecular Weight (calculated)
99686.1 Da
IEP (calculated)
4.403
GRAVY (calculated)
-0.889
Length
888 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLVRVEVRN VYGLGKTELH RDVDREDPKA VLNGVAVSGL VGILRQLGDL TEFATEIFHG IQEEVILTSS RSNKLKMRLK QIETTVPSIQ KAVLEQPNHI
101: QFAYTGGLEW HPRIPNVQDY FVYDDLPQFI MAPYDDCRDP PRLQLLDKFD INGPGSCLKR YTDPTHFKRS SRASKHPVIK KKKSLPRSRD VSRVASMANQ
201: SDRKTLTSLS FSGRTSSSKT ASTVETESKS DLQDHRSCSF DSRSGGEKLK GVYTPSRFTP GPRTIASVLS ESESESEDAT DDSPSQDLTP RGSSCVSWRE
301: KAEIVEADTL KLETDEAPEV METNAELESG LKEHRVVETV QDITPRVVEM DSEDETESEE DDFVDALYTI DSESDNDQEV QKQISNEITE EEFDNYVCEK
401: ETENVSNSFG LEDEAMCAAA SELHLSSPVS KPDEMIHQDP WEDLDMSNGT THSYSNGFSN PLYDTNGVQE HQESEDESSC DNEEGTQLWT NGNLLGLKPS
501: KPEIEEETIK ETDAEALQEQ PLREAHKADF DWFTSSPQLD HMKISFTPSE TLPSSELKLK LPDEYTFSSF QLVPETGGGT SLPDSDSDKD TFCRTSSYVS
601: DNSDNQSVSI SEQQSDDERK SQQELYDDSF HRINTEASSL SAPSSQFETS NGYLAGKISY LQNPAEPLPP PLPPLQWMVS KVPSGRFEDN NKQSFKDTLT
701: RALEQRSSLS TVKKEESNNV TAYDPKPDNN KQSFKETLTR ALEQRSYLST VKKEEPNNII TYDPKPDNNK QSFKDTLTRA LEQRSSLSMI KKEESNSVIA
801: YDTKPENNVR DYKQSHGNVK ETEAGDFLHQ IRTKQFTLRR VVTTKASSSE ATMNTNFSVI LEKANSIRQA VANDDGDGES DTWSDSDT
101: QFAYTGGLEW HPRIPNVQDY FVYDDLPQFI MAPYDDCRDP PRLQLLDKFD INGPGSCLKR YTDPTHFKRS SRASKHPVIK KKKSLPRSRD VSRVASMANQ
201: SDRKTLTSLS FSGRTSSSKT ASTVETESKS DLQDHRSCSF DSRSGGEKLK GVYTPSRFTP GPRTIASVLS ESESESEDAT DDSPSQDLTP RGSSCVSWRE
301: KAEIVEADTL KLETDEAPEV METNAELESG LKEHRVVETV QDITPRVVEM DSEDETESEE DDFVDALYTI DSESDNDQEV QKQISNEITE EEFDNYVCEK
401: ETENVSNSFG LEDEAMCAAA SELHLSSPVS KPDEMIHQDP WEDLDMSNGT THSYSNGFSN PLYDTNGVQE HQESEDESSC DNEEGTQLWT NGNLLGLKPS
501: KPEIEEETIK ETDAEALQEQ PLREAHKADF DWFTSSPQLD HMKISFTPSE TLPSSELKLK LPDEYTFSSF QLVPETGGGT SLPDSDSDKD TFCRTSSYVS
601: DNSDNQSVSI SEQQSDDERK SQQELYDDSF HRINTEASSL SAPSSQFETS NGYLAGKISY LQNPAEPLPP PLPPLQWMVS KVPSGRFEDN NKQSFKDTLT
701: RALEQRSSLS TVKKEESNNV TAYDPKPDNN KQSFKETLTR ALEQRSYLST VKKEEPNNII TYDPKPDNNK QSFKDTLTRA LEQRSSLSMI KKEESNSVIA
801: YDTKPENNVR DYKQSHGNVK ETEAGDFLHQ IRTKQFTLRR VVTTKASSSE ATMNTNFSVI LEKANSIRQA VANDDGDGES DTWSDSDT
001: MPLVRLQVRN VYGLGQKELH TKVDREDPKA ILDDVAVSGL VGILRQLGDL TEFAAEIFHG IQEEVMITAS RSNKLKMRLK QIEAKVPTIQ KTVLAQTNHI
101: HFAYTGGLEW HPRIPNVQNH FMYDELPPFI MTPYEDCREP PRLHLLDKFD INGPGSCLKR YSDPTHFKRA SRASKPSEIK KKKSIQRGRD ISRLASVANQ
201: SDRKTCTSLS FSGRTSTSKT ASTIEIESKS DLQEHRSFSF DSRSGGEKPK RVSSSSRFTP GSRTIASVLS ESESESDSPS QDLTARGSSS VSWHEKAEIV
301: ECNVLQCATD EAPEVMETNF VLDAEPVSRL KEHSAVEAVQ DIKPKELEMD NEDETESEGD DFVDALYTID SESENDEAFQ ATKEVQKNLY NDITEQETEK
401: ISNNFSVDET KCAATSELHL SSSPVYKSDE LIHQDPWAAS EISSGTHSYS NGFSNPLYDI SGIQEHQESE EVESSCDTES IKTWTNGNLL GLKPSKPKII
501: AETIPEIVED IDSETFQEHL REDYKAPFDW FTSSPPLDHM KISFKSSETL PSSELQLKLP DEYTFSSFQL VPETIATSLP DSDSDKDTFC RSSSYISDNS
601: DNDNRSVSMS EQQWEEESEG IRESKRQQEL YDSFHRVNAE ASSLPVPFPK IETTNGCLVE NVSYLQNPAE PLPPPLPPLQ WMVSKIPSAG FEDNNKQSLK
701: DALTQAFEKN NNSLTAVKKK EPHIVTVSDP KLVTKVHLKN NVRDYKQSHG NTNETEAGDF LHQIRTKQFN LRRVVRTKTS SSETTMNTNI SVILEKANSI
801: RQAVASDDGE GESDTWSDSD T
101: HFAYTGGLEW HPRIPNVQNH FMYDELPPFI MTPYEDCREP PRLHLLDKFD INGPGSCLKR YSDPTHFKRA SRASKPSEIK KKKSIQRGRD ISRLASVANQ
201: SDRKTCTSLS FSGRTSTSKT ASTIEIESKS DLQEHRSFSF DSRSGGEKPK RVSSSSRFTP GSRTIASVLS ESESESDSPS QDLTARGSSS VSWHEKAEIV
301: ECNVLQCATD EAPEVMETNF VLDAEPVSRL KEHSAVEAVQ DIKPKELEMD NEDETESEGD DFVDALYTID SESENDEAFQ ATKEVQKNLY NDITEQETEK
401: ISNNFSVDET KCAATSELHL SSSPVYKSDE LIHQDPWAAS EISSGTHSYS NGFSNPLYDI SGIQEHQESE EVESSCDTES IKTWTNGNLL GLKPSKPKII
501: AETIPEIVED IDSETFQEHL REDYKAPFDW FTSSPPLDHM KISFKSSETL PSSELQLKLP DEYTFSSFQL VPETIATSLP DSDSDKDTFC RSSSYISDNS
601: DNDNRSVSMS EQQWEEESEG IRESKRQQEL YDSFHRVNAE ASSLPVPFPK IETTNGCLVE NVSYLQNPAE PLPPPLPPLQ WMVSKIPSAG FEDNNKQSLK
701: DALTQAFEKN NNSLTAVKKK EPHIVTVSDP KLVTKVHLKN NVRDYKQSHG NTNETEAGDF LHQIRTKQFN LRRVVRTKTS SSETTMNTNI SVILEKANSI
801: RQAVASDDGE GESDTWSDSD T
Arabidopsis Description
SCAR1Protein SCAR1 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWX6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.