Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- mitochondrion 2
- extracellular 3
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90172 | Canola | nucleus | 13.92 | 11.88 |
| Zm00001d032131_P001 | Maize | cytosol, extracellular, plastid | 2.08 | 11.81 |
| CDY43322 | Canola | nucleus | 13.55 | 11.65 |
| Zm00001d025836_P001 | Maize | cytosol | 1.71 | 11.2 |
| Zm00001d025835_P001 | Maize | cytosol | 1.71 | 11.2 |
| CDY17225 | Canola | nucleus | 10.99 | 11.1 |
| GSMUA_AchrUn_... | Banana | cytosol | 15.14 | 10.85 |
| KRH58965 | Soybean | nucleus | 13.06 | 10.81 |
| CDX78876 | Canola | nucleus | 9.4 | 10.61 |
| CDY63143 | Canola | nucleus | 11.11 | 10.25 |
| TraesCS3A01G134300.3 | Wheat | cytosol | 15.38 | 9.82 |
| TraesCS3B01G168100.1 | Wheat | cytosol | 15.38 | 9.81 |
| GSMUA_Achr10P... | Banana | cytosol | 14.04 | 9.68 |
| Os01t0208600-01 | Rice | cytosol | 15.75 | 9.67 |
| TraesCS3D01G150600.1 | Wheat | cytosol | 15.14 | 9.66 |
| GSMUA_Achr2P15470_001 | Banana | nucleus | 12.82 | 9.63 |
| HORVU3Hr1G029210.3 | Barley | cytosol | 15.02 | 9.51 |
| KXG31590 | Sorghum | cytosol | 15.38 | 9.18 |
| Solyc02g076840.2.1 | Tomato | nucleus | 14.16 | 8.92 |
| Zm00001d008906_P003 | Maize | cytosol | 14.77 | 8.67 |
| CDY69042 | Canola | nucleus | 10.87 | 7.47 |
| CDY39815 | Canola | nucleus | 8.67 | 7.14 |
| VIT_08s0058g00770.t01 | Wine grape | cytosol | 1.1 | 6.34 |
| CDX91460 | Canola | cytosol | 10.74 | 6.29 |
| CDX99451 | Canola | nucleus | 13.06 | 5.61 |
Protein Annotations
| EnsemblPlants:CDX78875 | EnsemblPlantsGene:GSBRNA2T00131352001 | ProteinID:CDX78875 | ProteinID:CDX78875.1 | SEG:seg | UniParc:UPI0004EDC8C9 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA01g09420D
Coordinates
chrLK031816:-:564072..568950
Molecular Weight (calculated)
89436.9 Da
IEP (calculated)
4.106
GRAVY (calculated)
-0.449
Length
819 amino acids
Sequence
(BLAST)
(BLAST)
001: MMPPIHLFLK LLVMNKSHQW FFIPKSFLLQ QLLRRSKSVL PEEPVTTCLS LTKAATIEGA LPEKPLETYP PFAELPKEEI VFKEADDATH PSVSEAISDE
101: QISPVVLHSE KFPAAAAPPQ EQIVLEEFVA NLCLTEAVLD KRVLPEEPVT TCLSLTKAAT IEGALPEKPL ETYPPFAELP KEEIVFKEAD DATHPSVSEA
201: ISDEQISPVV LHSEKFPAAA APPQEQIVLE EFVANLCLTE AVLDKRVLPE EPVTTCLSLT KAATIEGALP EKPLETYPPF AELPKEEIVF KEADDATHPS
301: IHPSCAEAES DKNVVPDVLD SENLSVSEAI TQEQIEIEEF VGVDPCSEAR GDTTEAGPHN NEEPLTTDLS SESSFDEKIP GLEAPASTTE TGPQGKTFPE
401: EPVATYLSLE EPVRDDKVLP KEPAAAFLDL SEGIPDQQVF LDDAAFLSFA EAIFDQKFSP EVPDSMDLPA KNTLEKEVET SDGTIVEPVN IWSNGGLLGL
501: APSKPPVFAE PKSVSEHMQN EFNEASVIAT KKQGSSSRPV EDTEKSSLPL VVSDPTSQQQ SNMLSHSNGS LSPLQSTATS FKVFDLSHRL LMAGFRGNTS
601: STYKFESIPS TSYDTKAAAI EDKTQQTPPR GPSFEEQLAY ESSIFGSPTS SPPVEHMKIS FSPIDPSPVS KLKLRIPCQP QYNGENVDTL PSFQLVPEAS
701: NSDNEDENSD IFCQSSPGVS DNCLSDSELW ESDESPRESA SSLKQGGERS THGDMGSFSS LFLDLPCYDS VDHHSTSPRL DQEQEREQVP EYKPSVSEII
801: RDWPPNQPNA NASPKKTQT
101: QISPVVLHSE KFPAAAAPPQ EQIVLEEFVA NLCLTEAVLD KRVLPEEPVT TCLSLTKAAT IEGALPEKPL ETYPPFAELP KEEIVFKEAD DATHPSVSEA
201: ISDEQISPVV LHSEKFPAAA APPQEQIVLE EFVANLCLTE AVLDKRVLPE EPVTTCLSLT KAATIEGALP EKPLETYPPF AELPKEEIVF KEADDATHPS
301: IHPSCAEAES DKNVVPDVLD SENLSVSEAI TQEQIEIEEF VGVDPCSEAR GDTTEAGPHN NEEPLTTDLS SESSFDEKIP GLEAPASTTE TGPQGKTFPE
401: EPVATYLSLE EPVRDDKVLP KEPAAAFLDL SEGIPDQQVF LDDAAFLSFA EAIFDQKFSP EVPDSMDLPA KNTLEKEVET SDGTIVEPVN IWSNGGLLGL
501: APSKPPVFAE PKSVSEHMQN EFNEASVIAT KKQGSSSRPV EDTEKSSLPL VVSDPTSQQQ SNMLSHSNGS LSPLQSTATS FKVFDLSHRL LMAGFRGNTS
601: STYKFESIPS TSYDTKAAAI EDKTQQTPPR GPSFEEQLAY ESSIFGSPTS SPPVEHMKIS FSPIDPSPVS KLKLRIPCQP QYNGENVDTL PSFQLVPEAS
701: NSDNEDENSD IFCQSSPGVS DNCLSDSELW ESDESPRESA SSLKQGGERS THGDMGSFSS LFLDLPCYDS VDHHSTSPRL DQEQEREQVP EYKPSVSEII
801: RDWPPNQPNA NASPKKTQT
0001: MPLVRFKIRN ELSLGGPEIQ RSASVEDEEP KAILGAVEVA GLIGILRQLG DLAEFSAEVF NGLQEEVTVT ASRCQKLTSR VRRIESALSP LEKAVLSQTS
0101: HIHFAYTAGS EWHPRIRNGH SHFVQSDLPL CVMESYEQCR DPPPLHLLDR FAVGGPGSCL RKYSDPTFFR KELSNPSKTD DIKVQRDQAH RKRKKKRLPQ
0201: RNICRSNAVS TSDETNGAHL SSFTDDRPTT SRSTSTVDMP RSSNMQDLSD IVDQSYLQGQ SGAQEQSEAQ VQSDFQESSK ARDSITGSGY IEYVINQSPV
0301: DKPEVKLVEG FLSGSLCPAD RIGSTVPEGC IEVVDDNILY SPSEDLLVPS ASNVCDEKKE TLESMVEKSR KDDEPSELHE SKFGPVTPDR VRQNQRDFDR
0401: TYILFDEVDI VGEKQSKSQA NNIDGTLGIE NEGEDKSEQE SEADEFVDAR NTIESESESD IDGVPKPKLE HYFGDISTYC SEDANSDNND GSEDITYEEM
0501: AHDPRHENSE DESCSGSYLP EDSNVSSCLS DPVCEETLFH DENSQKPWEF FTMCPSLLAE KAVPDVTILR EEPVMAHPLF AGDSANEKIS SEERIISCPS
0601: LKDAIPAEKI LPEEHLVNYP SLEAIPHEKI LPGESIAKYP SFAEIIPQEK ILSEKSLEEA VLDNMTPAGE PDAAHPSFPK AVQDKKISPE VLDSKIFSVP
0701: KAVSQEPISL EEFVRIHPCL AEAVPDERFL IEEPPSTCLS LTKAMPTEIL LPEKTLESSH YLEELPEEDI LQEKSVDSTH PSCAKAAAET NLSPEVLDST
0801: KLSVAEAVPQ EQVSLEEFVG INPCLVEAVP DERLLPEEPD TTYLSLTKAV AIEKVLSEEL LETYPSLAEL PEEEFLQEET DDATHTSEAV SDEEISQEVS
0901: DSTNLSLEEA LPLEHISHEE FVGIDQCLVE VAPEERFLPE EPVITCLSLT MEGVLSEKSP ETYPSLSELP EEKILDEEAD DAMHPCLSEA VSDEQSSPNV
1001: LGSTNSPVAE AVPQAQISVE EFVGIDPCLV EAVPDMRDLP EEHITSCIYL TNVVPIEEVL PEEPFEACAS LGKLPKDKIS QEESDEATHT LSCAKAESDE
1101: HVSLEVLNST NLSAAEAIPN EQVTLDEFVG IDPCLGEVVL DEEVLPEQLD TTCRSLTKAA PIMTIFPEEP PEVYPSLEEL PEEKIAQEEE VDDATHPYFS
1201: EAVCDEKIPP LEDPGSTHPS LEESVPYEEA SHEELVGTNP FLESAFPNEI GFPDEPGVTY RSSAEAVSKE KNLPEESLPT YPSWAEVVPD EKISREELDS
1301: TYPSSAEAVF DENISGSEAP GSTTETGRQN KTFPEKTFAT ENSLNEAVFD EKIPGSEAPV STTETGLHNE TFTEEPVATD ISLNEAVFGE IIPGSEAPGS
1401: ATETGLHNKT FPEKPFATDL SLKEAVFDEK IPGSEASSST TETSPHNKTF PRETITTDLS STEAVFDEKI TGSGVPSFTT ETGSHNKCFP EEPVPKENIL
1501: PKEPAAAYLA LAEGIPDQKV FLDDAALLLF AEAIFDQKFS PEVPDSTYPS LKEPEMHVAA PCVVTDLPAK NIKVKEGEVH NEPYTASDVS MNQKSGLLEP
1601: ESTERTFPSS GGTVTISPDT QNSLPNGTSV ESISIWSNGG LLGLAPLKPP VFAEPNSGSQ HIKHEINEAS VLSTRKQESS SRSVENAEKS SLPLIVSDPT
1701: SQQQSNMSSL SPMQSTGTSF RVFGLSHRLL MAGFRGNSSS TCKFESVPSS SYDTRVAAIE DRTQQSPGGS SFEEQLDYES SLFGSPTSSP PVEHMKISFN
1801: PIEASPVPKL KLRIPCQPRY NGENADMFPS FQLVPEASNS DDGDDNSDTF CQSSPCVSDY CLSDSELWES DESPRISVSS LKQVEERSRH GDMGSFSGSF
1901: LDLPCYDAVD HQSTFSRLEQ EQVPEYKPSV SEIIRAWPPN QPKSSPCNEA NVDANTVSKK TQDQSLGLVA TDDEGGDSVC LDEHKTKGI
0101: HIHFAYTAGS EWHPRIRNGH SHFVQSDLPL CVMESYEQCR DPPPLHLLDR FAVGGPGSCL RKYSDPTFFR KELSNPSKTD DIKVQRDQAH RKRKKKRLPQ
0201: RNICRSNAVS TSDETNGAHL SSFTDDRPTT SRSTSTVDMP RSSNMQDLSD IVDQSYLQGQ SGAQEQSEAQ VQSDFQESSK ARDSITGSGY IEYVINQSPV
0301: DKPEVKLVEG FLSGSLCPAD RIGSTVPEGC IEVVDDNILY SPSEDLLVPS ASNVCDEKKE TLESMVEKSR KDDEPSELHE SKFGPVTPDR VRQNQRDFDR
0401: TYILFDEVDI VGEKQSKSQA NNIDGTLGIE NEGEDKSEQE SEADEFVDAR NTIESESESD IDGVPKPKLE HYFGDISTYC SEDANSDNND GSEDITYEEM
0501: AHDPRHENSE DESCSGSYLP EDSNVSSCLS DPVCEETLFH DENSQKPWEF FTMCPSLLAE KAVPDVTILR EEPVMAHPLF AGDSANEKIS SEERIISCPS
0601: LKDAIPAEKI LPEEHLVNYP SLEAIPHEKI LPGESIAKYP SFAEIIPQEK ILSEKSLEEA VLDNMTPAGE PDAAHPSFPK AVQDKKISPE VLDSKIFSVP
0701: KAVSQEPISL EEFVRIHPCL AEAVPDERFL IEEPPSTCLS LTKAMPTEIL LPEKTLESSH YLEELPEEDI LQEKSVDSTH PSCAKAAAET NLSPEVLDST
0801: KLSVAEAVPQ EQVSLEEFVG INPCLVEAVP DERLLPEEPD TTYLSLTKAV AIEKVLSEEL LETYPSLAEL PEEEFLQEET DDATHTSEAV SDEEISQEVS
0901: DSTNLSLEEA LPLEHISHEE FVGIDQCLVE VAPEERFLPE EPVITCLSLT MEGVLSEKSP ETYPSLSELP EEKILDEEAD DAMHPCLSEA VSDEQSSPNV
1001: LGSTNSPVAE AVPQAQISVE EFVGIDPCLV EAVPDMRDLP EEHITSCIYL TNVVPIEEVL PEEPFEACAS LGKLPKDKIS QEESDEATHT LSCAKAESDE
1101: HVSLEVLNST NLSAAEAIPN EQVTLDEFVG IDPCLGEVVL DEEVLPEQLD TTCRSLTKAA PIMTIFPEEP PEVYPSLEEL PEEKIAQEEE VDDATHPYFS
1201: EAVCDEKIPP LEDPGSTHPS LEESVPYEEA SHEELVGTNP FLESAFPNEI GFPDEPGVTY RSSAEAVSKE KNLPEESLPT YPSWAEVVPD EKISREELDS
1301: TYPSSAEAVF DENISGSEAP GSTTETGRQN KTFPEKTFAT ENSLNEAVFD EKIPGSEAPV STTETGLHNE TFTEEPVATD ISLNEAVFGE IIPGSEAPGS
1401: ATETGLHNKT FPEKPFATDL SLKEAVFDEK IPGSEASSST TETSPHNKTF PRETITTDLS STEAVFDEKI TGSGVPSFTT ETGSHNKCFP EEPVPKENIL
1501: PKEPAAAYLA LAEGIPDQKV FLDDAALLLF AEAIFDQKFS PEVPDSTYPS LKEPEMHVAA PCVVTDLPAK NIKVKEGEVH NEPYTASDVS MNQKSGLLEP
1601: ESTERTFPSS GGTVTISPDT QNSLPNGTSV ESISIWSNGG LLGLAPLKPP VFAEPNSGSQ HIKHEINEAS VLSTRKQESS SRSVENAEKS SLPLIVSDPT
1701: SQQQSNMSSL SPMQSTGTSF RVFGLSHRLL MAGFRGNSSS TCKFESVPSS SYDTRVAAIE DRTQQSPGGS SFEEQLDYES SLFGSPTSSP PVEHMKISFN
1801: PIEASPVPKL KLRIPCQPRY NGENADMFPS FQLVPEASNS DDGDDNSDTF CQSSPCVSDY CLSDSELWES DESPRISVSS LKQVEERSRH GDMGSFSGSF
1901: LDLPCYDAVD HQSTFSRLEQ EQVPEYKPSV SEIIRAWPPN QPKSSPCNEA NVDANTVSKK TQDQSLGLVA TDDEGGDSVC LDEHKTKGI
Arabidopsis Description
WAVE5Scar-like domain-containing protein WAVE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPK0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.