Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G18600.1 | CDY48250 | AT2G44690.1 | 17267444 |
| AT4G18600.1 | CDY71169 | AT2G44690.1 | 17267444 |
| AT4G18600.1 | CDY05919 | AT3G49290.1 | 17267444 |
| AT4G18600.1 | CDY08121 | AT3G49290.1 | 17267444 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78876 | Canola | nucleus | 27.54 | 72.31 |
| Bra013329.1-P | Field mustard | nucleus | 56.03 | 46.62 |
| Zm00001d025836_P001 | Maize | cytosol | 2.41 | 36.8 |
| Zm00001d025835_P001 | Maize | cytosol | 2.41 | 36.8 |
| Zm00001d032131_P001 | Maize | cytosol, extracellular, plastid | 2.47 | 32.64 |
| AT4G18600.1 | Thale cress | nucleus | 27.7 | 26.04 |
| CDX90172 | Canola | nucleus | 10.97 | 21.77 |
| CDY43322 | Canola | nucleus | 10.81 | 21.62 |
| CDY17225 | Canola | nucleus | 9.18 | 21.58 |
| CDY63143 | Canola | nucleus | 9.44 | 20.27 |
| GSMUA_Achr2P15470_001 | Banana | nucleus | 10.18 | 17.8 |
| GSMUA_Achr10P... | Banana | cytosol | 10.91 | 17.51 |
| TraesCS3B01G168100.1 | Wheat | cytosol | 11.7 | 17.37 |
| TraesCS3D01G150600.1 | Wheat | cytosol | 11.65 | 17.3 |
| HORVU3Hr1G029210.3 | Barley | cytosol | 11.6 | 17.08 |
| TraesCS3A01G134300.3 | Wheat | cytosol | 11.49 | 17.07 |
| GSMUA_AchrUn_... | Banana | cytosol | 10.02 | 16.71 |
| CDY69042 | Canola | nucleus | 10.34 | 16.53 |
| Os01t0208600-01 | Rice | cytosol | 11.33 | 16.19 |
| Solyc02g076840.2.1 | Tomato | nucleus | 10.91 | 15.99 |
| KXG31590 | Sorghum | cytosol | 11.49 | 15.96 |
| CDY39815 | Canola | nucleus | 8.24 | 15.78 |
| CDX91460 | Canola | cytosol | 10.81 | 14.74 |
| Zm00001d008906_P003 | Maize | cytosol | 10.6 | 14.48 |
| CDX78875 | Canola | extracellular, vacuole | 5.61 | 13.06 |
Protein Annotations
| EnsemblPlants:CDX99451 | EnsemblPlantsGene:GSBRNA2T00107790001 | Gene3D:1.20.5.340 | Gene3D:1.20.58.1570 | GO:A0A078EE96 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0030036 | InterPro:SCAR/WAVE_fam | PANTHER:PTHR12902 | PANTHER:PTHR12902:SF1 | ProteinID:CDX99451 | ProteinID:CDX99451.1 |
| SEG:seg | UniParc:UPI0004EE7223 | MapMan:20.2.2.2.4 | : | : | : |
Description
BnaC01g11010D
Coordinates
chrLK031910:+:799621..807652
Molecular Weight (calculated)
208654.0 Da
IEP (calculated)
4.151
GRAVY (calculated)
-0.500
Length
1906 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPLVRFKIRN ELSLGGPELN RSPAVEYEEP KAILGAVEVA GLVGILRQLG DLAEFSAEVF NGIQEEVTVT ASRCQKLTSR VKRIESALSP LEKAVLSQTS
0101: HIHFAYTAGC EWHPRIRNGQ RHFVQSDLPL CVMETYEQCR DPPPLHLLDR FDAGGPGSCL RKYSDPTFFR KELGNHSKVD DAKAQKDQAH RKRKKKRLPQ
0201: RNICRSRAVS TSDDTNGARL SSLTDDIPTT SQSTSTVDMP RSSNMQDLSG SIDQSHLQEQ SNSQEQSEAQ VQSDLQESSR PRDSITGSGY IEYVINHSPV
0301: NKPDVKLLEG SLPSSLQPAD RIGSTVPQGR VEVVDDNIRY SPSKEIPVPY ASIVCDDKKE ALESRGEKSN KDEEASEIHE PKIGPGTPDR VKQNQRDFDR
0401: TYDFFDEVCI VGEKQSKSQA NSIDEKPRIE SEEENTSEAD EFVDARNTIE SESESEFDGI PKPKLEHYFG DISTYCSEDA SSDNNGGSED IPYEEMVEDP
0501: RHENSLDESC SVSYLSDDAS VSCCQSDPVC GKVLSHDETF QNPRDFSAMR PSLLAEAAFP DETILREPVA AHTLLAGDCA NEKISFEERI SSGMFLKDAI
0601: PAEKILPEEH LANYPSLAEA VPHEKSLPGE SVAKYPSFEE IAPSERILPE NSLSKIRSLA EAVPDNMALA EEPGAAHPSF PKAVQENKIS PEVLDSKNLS
0701: DTVPEAVSEE QISVEGFVGV SRCLAEVVPD ERFLTEEPEE AATACTSLSK VMPTEKLFPE KTLEAPQDLS ELPEENILRE KSVDYTHPSS VSHEQIRLEE
0801: SEKSVGSAPP DENLSPEVLD STNVSVAEAV PQEQIGLGEF LGIDACLAKA VPDERGLPEE PVTTCVSLTK AGANEKTLPE EPLETYPLAE LPEEKISPQE
0901: TVDATHPFES VIDEESSPEV SCLSLEEALP QEQISLEEFV SIDPCLAKAV PDEWLSPEEG VTTCLSLKKA ATIEEVLPEK SLETYSFFAE LPEEKIVHEE
1001: VDDATHPSVS KSVSDEKILP EILESTNFPV ATALPQEQTL LEEFVGNPYP TEAVVDKRVL PEEPVTTCLS LKKAATVGVL PEKPSETYPS FGEFPDEKIV
1101: LQEADDATHL SVSEAVGDEK ISPEVPDSTN FPAAAALPQE QIVEEFVGNP CMTEAVPDKT ILPGEPVTTC LSLTKAATIE GALPEKPLET YPPFAELPKE
1201: EIVFKEADDA THPSVSEAIS DEQISPVVLH SEKFPAAEAP LQEKIVLEEF AANLCLTEAV LDKRVLPEEP VTTCLSLTKA ATIEGALPEK PLETYPPFAE
1301: LPKEEIVFKE ADDATHPSVS EAISDEQISP PLETYPPFAE LPKEEIVFKE ADDATHPSVS EAISDEQISP VVLHSEKFPA AEAPLQEKIV LEEFAANLCL
1401: TEAVLDKRVL PEEPVTTSDD ATHPSVSEAI SDEQISPVVL HSEKFPAAEA PLQEKIVLEE FAANLCLTEA VLDKRVSFDE EISGSESRGD TTEAGPHNNE
1501: EPLTTDLSLT ESSFDEKIPG LEAPASTTET DPHGKTFPEE PVATYLSLEE PVRDDKVLPK EPAAAFLDLS EGIPDQQVFL DDAAFLSFAE AIFDQKFSPE
1601: VPDSMDLPAK NTLEKEVETS DGTIVEPVNI WSNGGLLGLA PSKPPVFAEP KSVSEHIQNE FNEASVIATK KQGLSSRPVE DTEKSSLPLV VSDPTSQQQS
1701: NMLSHSNGSL SPLQSTATSF KVFGLSHRLL MAGFRGNTSS TYKFESIPTT SYDTKAAAIE DKTQQTPPRG PSFEEQLAYE SSIFGSPTSS PPVEHMKISF
1801: SPIDPSPVSK LKLRIPCQPQ YNGENVDTFP SFQLQGGERS THGDMGSFSS LFLDLPCYDS VDHHSTSPRL EQEHEREQVP EYKPSVSEII RDWPPNANAV
1901: LKKTQT
0101: HIHFAYTAGC EWHPRIRNGQ RHFVQSDLPL CVMETYEQCR DPPPLHLLDR FDAGGPGSCL RKYSDPTFFR KELGNHSKVD DAKAQKDQAH RKRKKKRLPQ
0201: RNICRSRAVS TSDDTNGARL SSLTDDIPTT SQSTSTVDMP RSSNMQDLSG SIDQSHLQEQ SNSQEQSEAQ VQSDLQESSR PRDSITGSGY IEYVINHSPV
0301: NKPDVKLLEG SLPSSLQPAD RIGSTVPQGR VEVVDDNIRY SPSKEIPVPY ASIVCDDKKE ALESRGEKSN KDEEASEIHE PKIGPGTPDR VKQNQRDFDR
0401: TYDFFDEVCI VGEKQSKSQA NSIDEKPRIE SEEENTSEAD EFVDARNTIE SESESEFDGI PKPKLEHYFG DISTYCSEDA SSDNNGGSED IPYEEMVEDP
0501: RHENSLDESC SVSYLSDDAS VSCCQSDPVC GKVLSHDETF QNPRDFSAMR PSLLAEAAFP DETILREPVA AHTLLAGDCA NEKISFEERI SSGMFLKDAI
0601: PAEKILPEEH LANYPSLAEA VPHEKSLPGE SVAKYPSFEE IAPSERILPE NSLSKIRSLA EAVPDNMALA EEPGAAHPSF PKAVQENKIS PEVLDSKNLS
0701: DTVPEAVSEE QISVEGFVGV SRCLAEVVPD ERFLTEEPEE AATACTSLSK VMPTEKLFPE KTLEAPQDLS ELPEENILRE KSVDYTHPSS VSHEQIRLEE
0801: SEKSVGSAPP DENLSPEVLD STNVSVAEAV PQEQIGLGEF LGIDACLAKA VPDERGLPEE PVTTCVSLTK AGANEKTLPE EPLETYPLAE LPEEKISPQE
0901: TVDATHPFES VIDEESSPEV SCLSLEEALP QEQISLEEFV SIDPCLAKAV PDEWLSPEEG VTTCLSLKKA ATIEEVLPEK SLETYSFFAE LPEEKIVHEE
1001: VDDATHPSVS KSVSDEKILP EILESTNFPV ATALPQEQTL LEEFVGNPYP TEAVVDKRVL PEEPVTTCLS LKKAATVGVL PEKPSETYPS FGEFPDEKIV
1101: LQEADDATHL SVSEAVGDEK ISPEVPDSTN FPAAAALPQE QIVEEFVGNP CMTEAVPDKT ILPGEPVTTC LSLTKAATIE GALPEKPLET YPPFAELPKE
1201: EIVFKEADDA THPSVSEAIS DEQISPVVLH SEKFPAAEAP LQEKIVLEEF AANLCLTEAV LDKRVLPEEP VTTCLSLTKA ATIEGALPEK PLETYPPFAE
1301: LPKEEIVFKE ADDATHPSVS EAISDEQISP PLETYPPFAE LPKEEIVFKE ADDATHPSVS EAISDEQISP VVLHSEKFPA AEAPLQEKIV LEEFAANLCL
1401: TEAVLDKRVL PEEPVTTSDD ATHPSVSEAI SDEQISPVVL HSEKFPAAEA PLQEKIVLEE FAANLCLTEA VLDKRVSFDE EISGSESRGD TTEAGPHNNE
1501: EPLTTDLSLT ESSFDEKIPG LEAPASTTET DPHGKTFPEE PVATYLSLEE PVRDDKVLPK EPAAAFLDLS EGIPDQQVFL DDAAFLSFAE AIFDQKFSPE
1601: VPDSMDLPAK NTLEKEVETS DGTIVEPVNI WSNGGLLGLA PSKPPVFAEP KSVSEHIQNE FNEASVIATK KQGLSSRPVE DTEKSSLPLV VSDPTSQQQS
1701: NMLSHSNGSL SPLQSTATSF KVFGLSHRLL MAGFRGNTSS TYKFESIPTT SYDTKAAAIE DKTQQTPPRG PSFEEQLAYE SSIFGSPTSS PPVEHMKISF
1801: SPIDPSPVSK LKLRIPCQPQ YNGENVDTFP SFQLQGGERS THGDMGSFSS LFLDLPCYDS VDHHSTSPRL EQEHEREQVP EYKPSVSEII RDWPPNANAV
1901: LKKTQT
0001: MPLVRFKIRN ELSLGGPEIQ RSASVEDEEP KAILGAVEVA GLIGILRQLG DLAEFSAEVF NGLQEEVTVT ASRCQKLTSR VRRIESALSP LEKAVLSQTS
0101: HIHFAYTAGS EWHPRIRNGH SHFVQSDLPL CVMESYEQCR DPPPLHLLDR FAVGGPGSCL RKYSDPTFFR KELSNPSKTD DIKVQRDQAH RKRKKKRLPQ
0201: RNICRSNAVS TSDETNGAHL SSFTDDRPTT SRSTSTVDMP RSSNMQDLSD IVDQSYLQGQ SGAQEQSEAQ VQSDFQESSK ARDSITGSGY IEYVINQSPV
0301: DKPEVKLVEG FLSGSLCPAD RIGSTVPEGC IEVVDDNILY SPSEDLLVPS ASNVCDEKKE TLESMVEKSR KDDEPSELHE SKFGPVTPDR VRQNQRDFDR
0401: TYILFDEVDI VGEKQSKSQA NNIDGTLGIE NEGEDKSEQE SEADEFVDAR NTIESESESD IDGVPKPKLE HYFGDISTYC SEDANSDNND GSEDITYEEM
0501: AHDPRHENSE DESCSGSYLP EDSNVSSCLS DPVCEETLFH DENSQKPWEF FTMCPSLLAE KAVPDVTILR EEPVMAHPLF AGDSANEKIS SEERIISCPS
0601: LKDAIPAEKI LPEEHLVNYP SLEAIPHEKI LPGESIAKYP SFAEIIPQEK ILSEKSLEEA VLDNMTPAGE PDAAHPSFPK AVQDKKISPE VLDSKIFSVP
0701: KAVSQEPISL EEFVRIHPCL AEAVPDERFL IEEPPSTCLS LTKAMPTEIL LPEKTLESSH YLEELPEEDI LQEKSVDSTH PSCAKAAAET NLSPEVLDST
0801: KLSVAEAVPQ EQVSLEEFVG INPCLVEAVP DERLLPEEPD TTYLSLTKAV AIEKVLSEEL LETYPSLAEL PEEEFLQEET DDATHTSEAV SDEEISQEVS
0901: DSTNLSLEEA LPLEHISHEE FVGIDQCLVE VAPEERFLPE EPVITCLSLT MEGVLSEKSP ETYPSLSELP EEKILDEEAD DAMHPCLSEA VSDEQSSPNV
1001: LGSTNSPVAE AVPQAQISVE EFVGIDPCLV EAVPDMRDLP EEHITSCIYL TNVVPIEEVL PEEPFEACAS LGKLPKDKIS QEESDEATHT LSCAKAESDE
1101: HVSLEVLNST NLSAAEAIPN EQVTLDEFVG IDPCLGEVVL DEEVLPEQLD TTCRSLTKAA PIMTIFPEEP PEVYPSLEEL PEEKIAQEEE VDDATHPYFS
1201: EAVCDEKIPP LEDPGSTHPS LEESVPYEEA SHEELVGTNP FLESAFPNEI GFPDEPGVTY RSSAEAVSKE KNLPEESLPT YPSWAEVVPD EKISREELDS
1301: TYPSSAEAVF DENISGSEAP GSTTETGRQN KTFPEKTFAT ENSLNEAVFD EKIPGSEAPV STTETGLHNE TFTEEPVATD ISLNEAVFGE IIPGSEAPGS
1401: ATETGLHNKT FPEKPFATDL SLKEAVFDEK IPGSEASSST TETSPHNKTF PRETITTDLS STEAVFDEKI TGSGVPSFTT ETGSHNKCFP EEPVPKENIL
1501: PKEPAAAYLA LAEGIPDQKV FLDDAALLLF AEAIFDQKFS PEVPDSTYPS LKEPEMHVAA PCVVTDLPAK NIKVKEGEVH NEPYTASDVS MNQKSGLLEP
1601: ESTERTFPSS GGTVTISPDT QNSLPNGTSV ESISIWSNGG LLGLAPLKPP VFAEPNSGSQ HIKHEINEAS VLSTRKQESS SRSVENAEKS SLPLIVSDPT
1701: SQQQSNMSSL SPMQSTGTSF RVFGLSHRLL MAGFRGNSSS TCKFESVPSS SYDTRVAAIE DRTQQSPGGS SFEEQLDYES SLFGSPTSSP PVEHMKISFN
1801: PIEASPVPKL KLRIPCQPRY NGENADMFPS FQLVPEASNS DDGDDNSDTF CQSSPCVSDY CLSDSELWES DESPRISVSS LKQVEERSRH GDMGSFSGSF
1901: LDLPCYDAVD HQSTFSRLEQ EQVPEYKPSV SEIIRAWPPN QPKSSPCNEA NVDANTVSKK TQDQSLGLVA TDDEGGDSVC LDEHKTKGI
0101: HIHFAYTAGS EWHPRIRNGH SHFVQSDLPL CVMESYEQCR DPPPLHLLDR FAVGGPGSCL RKYSDPTFFR KELSNPSKTD DIKVQRDQAH RKRKKKRLPQ
0201: RNICRSNAVS TSDETNGAHL SSFTDDRPTT SRSTSTVDMP RSSNMQDLSD IVDQSYLQGQ SGAQEQSEAQ VQSDFQESSK ARDSITGSGY IEYVINQSPV
0301: DKPEVKLVEG FLSGSLCPAD RIGSTVPEGC IEVVDDNILY SPSEDLLVPS ASNVCDEKKE TLESMVEKSR KDDEPSELHE SKFGPVTPDR VRQNQRDFDR
0401: TYILFDEVDI VGEKQSKSQA NNIDGTLGIE NEGEDKSEQE SEADEFVDAR NTIESESESD IDGVPKPKLE HYFGDISTYC SEDANSDNND GSEDITYEEM
0501: AHDPRHENSE DESCSGSYLP EDSNVSSCLS DPVCEETLFH DENSQKPWEF FTMCPSLLAE KAVPDVTILR EEPVMAHPLF AGDSANEKIS SEERIISCPS
0601: LKDAIPAEKI LPEEHLVNYP SLEAIPHEKI LPGESIAKYP SFAEIIPQEK ILSEKSLEEA VLDNMTPAGE PDAAHPSFPK AVQDKKISPE VLDSKIFSVP
0701: KAVSQEPISL EEFVRIHPCL AEAVPDERFL IEEPPSTCLS LTKAMPTEIL LPEKTLESSH YLEELPEEDI LQEKSVDSTH PSCAKAAAET NLSPEVLDST
0801: KLSVAEAVPQ EQVSLEEFVG INPCLVEAVP DERLLPEEPD TTYLSLTKAV AIEKVLSEEL LETYPSLAEL PEEEFLQEET DDATHTSEAV SDEEISQEVS
0901: DSTNLSLEEA LPLEHISHEE FVGIDQCLVE VAPEERFLPE EPVITCLSLT MEGVLSEKSP ETYPSLSELP EEKILDEEAD DAMHPCLSEA VSDEQSSPNV
1001: LGSTNSPVAE AVPQAQISVE EFVGIDPCLV EAVPDMRDLP EEHITSCIYL TNVVPIEEVL PEEPFEACAS LGKLPKDKIS QEESDEATHT LSCAKAESDE
1101: HVSLEVLNST NLSAAEAIPN EQVTLDEFVG IDPCLGEVVL DEEVLPEQLD TTCRSLTKAA PIMTIFPEEP PEVYPSLEEL PEEKIAQEEE VDDATHPYFS
1201: EAVCDEKIPP LEDPGSTHPS LEESVPYEEA SHEELVGTNP FLESAFPNEI GFPDEPGVTY RSSAEAVSKE KNLPEESLPT YPSWAEVVPD EKISREELDS
1301: TYPSSAEAVF DENISGSEAP GSTTETGRQN KTFPEKTFAT ENSLNEAVFD EKIPGSEAPV STTETGLHNE TFTEEPVATD ISLNEAVFGE IIPGSEAPGS
1401: ATETGLHNKT FPEKPFATDL SLKEAVFDEK IPGSEASSST TETSPHNKTF PRETITTDLS STEAVFDEKI TGSGVPSFTT ETGSHNKCFP EEPVPKENIL
1501: PKEPAAAYLA LAEGIPDQKV FLDDAALLLF AEAIFDQKFS PEVPDSTYPS LKEPEMHVAA PCVVTDLPAK NIKVKEGEVH NEPYTASDVS MNQKSGLLEP
1601: ESTERTFPSS GGTVTISPDT QNSLPNGTSV ESISIWSNGG LLGLAPLKPP VFAEPNSGSQ HIKHEINEAS VLSTRKQESS SRSVENAEKS SLPLIVSDPT
1701: SQQQSNMSSL SPMQSTGTSF RVFGLSHRLL MAGFRGNSSS TCKFESVPSS SYDTRVAAIE DRTQQSPGGS SFEEQLDYES SLFGSPTSSP PVEHMKISFN
1801: PIEASPVPKL KLRIPCQPRY NGENADMFPS FQLVPEASNS DDGDDNSDTF CQSSPCVSDY CLSDSELWES DESPRISVSS LKQVEERSRH GDMGSFSGSF
1901: LDLPCYDAVD HQSTFSRLEQ EQVPEYKPSV SEIIRAWPPN QPKSSPCNEA NVDANTVSKK TQDQSLGLVA TDDEGGDSVC LDEHKTKGI
Arabidopsis Description
WAVE5Scar-like domain-containing protein WAVE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPK0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.