Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G18600.1 | CDY48250 | AT2G44690.1 | 17267444 |
| AT4G18600.1 | CDY71169 | AT2G44690.1 | 17267444 |
| AT4G18600.1 | CDY05919 | AT3G49290.1 | 17267444 |
| AT4G18600.1 | CDY08121 | AT3G49290.1 | 17267444 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025836_P001 | Maize | cytosol | 5.92 | 34.4 |
| Zm00001d025835_P001 | Maize | cytosol | 5.92 | 34.4 |
| Zm00001d032131_P001 | Maize | cytosol, extracellular, plastid | 6.2 | 31.25 |
| CDX99451 | Canola | nucleus | 72.31 | 27.54 |
| Bra013329.1-P | Field mustard | nucleus | 67.49 | 21.39 |
| CDY17225 | Canola | nucleus | 22.45 | 20.1 |
| AT4G18600.1 | Thale cress | nucleus | 54.13 | 19.38 |
| CDY63143 | Canola | nucleus | 22.73 | 18.58 |
| CDX90172 | Canola | nucleus | 24.24 | 18.33 |
| CDY43322 | Canola | nucleus | 23.97 | 18.26 |
| GSMUA_Achr10P... | Banana | cytosol | 23.0 | 14.06 |
| GSMUA_AchrUn_... | Banana | cytosol | 21.35 | 13.56 |
| Solyc02g076840.2.1 | Tomato | nucleus | 24.24 | 13.53 |
| GSMUA_Achr2P15470_001 | Banana | nucleus | 20.25 | 13.49 |
| TraesCS3B01G168100.1 | Wheat | cytosol | 23.42 | 13.24 |
| TraesCS3D01G150600.1 | Wheat | cytosol | 23.14 | 13.09 |
| HORVU3Hr1G029210.3 | Barley | cytosol | 23.28 | 13.06 |
| TraesCS3A01G134300.3 | Wheat | cytosol | 23.0 | 13.02 |
| KXG31590 | Sorghum | cytosol | 23.28 | 12.32 |
| Os01t0208600-01 | Rice | cytosol | 22.31 | 12.14 |
| CDY39815 | Canola | nucleus | 16.39 | 11.96 |
| CDY69042 | Canola | nucleus | 18.87 | 11.49 |
| Zm00001d008906_P003 | Maize | cytosol | 21.07 | 10.97 |
| CDX91460 | Canola | cytosol | 19.42 | 10.09 |
| CDX78875 | Canola | extracellular, vacuole | 10.61 | 9.4 |
Protein Annotations
| EnsemblPlants:CDX78876 | EnsemblPlantsGene:GSBRNA2T00131353001 | Gene3D:1.20.5.340 | Gene3D:1.20.58.1570 | GO:A0A078CNS7 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0030036 | InterPro:SCAR/WAVE_fam | PANTHER:PTHR12902 | PANTHER:PTHR12902:SF1 | ProteinID:CDX78876 | ProteinID:CDX78876.1 |
| SEG:seg | UniParc:UPI0004EDC938 | MapMan:20.2.2.2.4 | : | : | : |
Description
BnaA01g09430D
Coordinates
chrLK031816:-:569100..572179
Molecular Weight (calculated)
79882.6 Da
IEP (calculated)
4.518
GRAVY (calculated)
-0.648
Length
726 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLVRFKIRN ELSLGGPELN RSPAVEYEEP KAILGAVEVA GLVGILRQLG DLAEFSAEVF NGIQEEVTVT ASRCQKLTSR VKRIESTLSP LEKAVLSQTS
101: HIHFAYTAGC EWHPRIRNGQ RHFVQSDLPL CVMETYEQCR DPPPLHLLDR FDAGGPGSCL RKYSDPTFFR KELGNHSKVD DAKAQKDQAH RKRKKKRLPQ
201: RNICRSRAVS TSDDTNGARL SSLTDDIPTT SQSTSTVDMP RSSNMQDLSG SIDQSHLQEQ SNSQEQSEAQ VQSDLQESSR PRDSVTGSGY IEYVINHSPV
301: NKPDVKLLEG SLPSSLQPAD RIGSTVPQGR VEIVDDNILY SPSKEIPVPY ASIVCDEKKE ALESRAEKSN KDEEASEIHE PKIGPGTPDR VKQNQRDFDR
401: TYDFFDVVGE KQSKSQANSI DEKPRIESEE ENTSEADEFV DARNTIESES ESEFDGIPKP KLEHYFGDIS TYCSEDASSD NNGGSEDIPY EEMVEDLRHE
501: NSLDESCSVS YLSDDASVSC CQSDPVCGKV LSHDGTFQSP RDFSAMRPSL LAEAAFQDET ILREPVAAHP LLAGDCANEK ISSEERISSG MSLKDAIPAE
601: KILPEEHLAK YPSLAEAVPH EKSLPGESVA KYPSFEEIAP FERILPESSL SKIRSLAEAV PDNMAPAEER GAAHPSFPKA VQEKKISPEV LDSTNLSGTV
701: PEAVSEEQIS VEGCVGVSPC LAEVVS
101: HIHFAYTAGC EWHPRIRNGQ RHFVQSDLPL CVMETYEQCR DPPPLHLLDR FDAGGPGSCL RKYSDPTFFR KELGNHSKVD DAKAQKDQAH RKRKKKRLPQ
201: RNICRSRAVS TSDDTNGARL SSLTDDIPTT SQSTSTVDMP RSSNMQDLSG SIDQSHLQEQ SNSQEQSEAQ VQSDLQESSR PRDSVTGSGY IEYVINHSPV
301: NKPDVKLLEG SLPSSLQPAD RIGSTVPQGR VEIVDDNILY SPSKEIPVPY ASIVCDEKKE ALESRAEKSN KDEEASEIHE PKIGPGTPDR VKQNQRDFDR
401: TYDFFDVVGE KQSKSQANSI DEKPRIESEE ENTSEADEFV DARNTIESES ESEFDGIPKP KLEHYFGDIS TYCSEDASSD NNGGSEDIPY EEMVEDLRHE
501: NSLDESCSVS YLSDDASVSC CQSDPVCGKV LSHDGTFQSP RDFSAMRPSL LAEAAFQDET ILREPVAAHP LLAGDCANEK ISSEERISSG MSLKDAIPAE
601: KILPEEHLAK YPSLAEAVPH EKSLPGESVA KYPSFEEIAP FERILPESSL SKIRSLAEAV PDNMAPAEER GAAHPSFPKA VQEKKISPEV LDSTNLSGTV
701: PEAVSEEQIS VEGCVGVSPC LAEVVS
0001: MPLVRFKIRN ELSLGGPEIQ RSASVEDEEP KAILGAVEVA GLIGILRQLG DLAEFSAEVF NGLQEEVTVT ASRCQKLTSR VRRIESALSP LEKAVLSQTS
0101: HIHFAYTAGS EWHPRIRNGH SHFVQSDLPL CVMESYEQCR DPPPLHLLDR FAVGGPGSCL RKYSDPTFFR KELSNPSKTD DIKVQRDQAH RKRKKKRLPQ
0201: RNICRSNAVS TSDETNGAHL SSFTDDRPTT SRSTSTVDMP RSSNMQDLSD IVDQSYLQGQ SGAQEQSEAQ VQSDFQESSK ARDSITGSGY IEYVINQSPV
0301: DKPEVKLVEG FLSGSLCPAD RIGSTVPEGC IEVVDDNILY SPSEDLLVPS ASNVCDEKKE TLESMVEKSR KDDEPSELHE SKFGPVTPDR VRQNQRDFDR
0401: TYILFDEVDI VGEKQSKSQA NNIDGTLGIE NEGEDKSEQE SEADEFVDAR NTIESESESD IDGVPKPKLE HYFGDISTYC SEDANSDNND GSEDITYEEM
0501: AHDPRHENSE DESCSGSYLP EDSNVSSCLS DPVCEETLFH DENSQKPWEF FTMCPSLLAE KAVPDVTILR EEPVMAHPLF AGDSANEKIS SEERIISCPS
0601: LKDAIPAEKI LPEEHLVNYP SLEAIPHEKI LPGESIAKYP SFAEIIPQEK ILSEKSLEEA VLDNMTPAGE PDAAHPSFPK AVQDKKISPE VLDSKIFSVP
0701: KAVSQEPISL EEFVRIHPCL AEAVPDERFL IEEPPSTCLS LTKAMPTEIL LPEKTLESSH YLEELPEEDI LQEKSVDSTH PSCAKAAAET NLSPEVLDST
0801: KLSVAEAVPQ EQVSLEEFVG INPCLVEAVP DERLLPEEPD TTYLSLTKAV AIEKVLSEEL LETYPSLAEL PEEEFLQEET DDATHTSEAV SDEEISQEVS
0901: DSTNLSLEEA LPLEHISHEE FVGIDQCLVE VAPEERFLPE EPVITCLSLT MEGVLSEKSP ETYPSLSELP EEKILDEEAD DAMHPCLSEA VSDEQSSPNV
1001: LGSTNSPVAE AVPQAQISVE EFVGIDPCLV EAVPDMRDLP EEHITSCIYL TNVVPIEEVL PEEPFEACAS LGKLPKDKIS QEESDEATHT LSCAKAESDE
1101: HVSLEVLNST NLSAAEAIPN EQVTLDEFVG IDPCLGEVVL DEEVLPEQLD TTCRSLTKAA PIMTIFPEEP PEVYPSLEEL PEEKIAQEEE VDDATHPYFS
1201: EAVCDEKIPP LEDPGSTHPS LEESVPYEEA SHEELVGTNP FLESAFPNEI GFPDEPGVTY RSSAEAVSKE KNLPEESLPT YPSWAEVVPD EKISREELDS
1301: TYPSSAEAVF DENISGSEAP GSTTETGRQN KTFPEKTFAT ENSLNEAVFD EKIPGSEAST STTETGPHNK TFPEEPFAME NFLNEAVFDE KIPGSEAPVS
1401: TTETGLHNET FTEEPVATDI SLNEAVFGEI IPGSEAPGSA TETGLHNKTF PEKPFATDLS LKEAVFDEKI PGSEASSSTT ETSPHNKTFP RETITTDLSS
1501: TEAVFDEKIT GSGVPSFTTE TGSHNKCFPE EPVPKENILP KEPAAAYLAL AEGIPDQKVF LDDAALLLFA EAIFDQKFSP EVPDSTYPSL KEPEMHVAAP
1601: CVVTDLPAKN IKVKEGEVHN EPYTASDVSM NQKSGLLEPE STERTFPSSG GTVTISPDTQ NSLPNGTSVE SISIWSNGGL LGLAPLKPPV FAEPNSGSQH
1701: IKHEINEASV LSTRKQESSS RSVENAEKSS LPLIVSDPTS QQQSNMSSLS PMQSTGTSFR VFGLSHRLLM AGFRGNSSST CKFESVPSSS YDTRVAAIED
1801: RTQQSPGGSS FEEQLDYESS LFGSPTSSPP VEHMKISFNP IEASPVPKLK LRIPCQPRYN GENADMFPSF QLVPEASNSD DGDDNSDTFC QSSPCVSDYC
1901: LSDSELWESD ESPRISVSSL KQVEERSRHG DMGSFSGSFL DLPCYDAVDH QSTFSRLEQE QVPEYKPSVS EIIRAWPPNQ PKSSPCNEAN VDANTVSKKT
2001: QDQSLGYL
0101: HIHFAYTAGS EWHPRIRNGH SHFVQSDLPL CVMESYEQCR DPPPLHLLDR FAVGGPGSCL RKYSDPTFFR KELSNPSKTD DIKVQRDQAH RKRKKKRLPQ
0201: RNICRSNAVS TSDETNGAHL SSFTDDRPTT SRSTSTVDMP RSSNMQDLSD IVDQSYLQGQ SGAQEQSEAQ VQSDFQESSK ARDSITGSGY IEYVINQSPV
0301: DKPEVKLVEG FLSGSLCPAD RIGSTVPEGC IEVVDDNILY SPSEDLLVPS ASNVCDEKKE TLESMVEKSR KDDEPSELHE SKFGPVTPDR VRQNQRDFDR
0401: TYILFDEVDI VGEKQSKSQA NNIDGTLGIE NEGEDKSEQE SEADEFVDAR NTIESESESD IDGVPKPKLE HYFGDISTYC SEDANSDNND GSEDITYEEM
0501: AHDPRHENSE DESCSGSYLP EDSNVSSCLS DPVCEETLFH DENSQKPWEF FTMCPSLLAE KAVPDVTILR EEPVMAHPLF AGDSANEKIS SEERIISCPS
0601: LKDAIPAEKI LPEEHLVNYP SLEAIPHEKI LPGESIAKYP SFAEIIPQEK ILSEKSLEEA VLDNMTPAGE PDAAHPSFPK AVQDKKISPE VLDSKIFSVP
0701: KAVSQEPISL EEFVRIHPCL AEAVPDERFL IEEPPSTCLS LTKAMPTEIL LPEKTLESSH YLEELPEEDI LQEKSVDSTH PSCAKAAAET NLSPEVLDST
0801: KLSVAEAVPQ EQVSLEEFVG INPCLVEAVP DERLLPEEPD TTYLSLTKAV AIEKVLSEEL LETYPSLAEL PEEEFLQEET DDATHTSEAV SDEEISQEVS
0901: DSTNLSLEEA LPLEHISHEE FVGIDQCLVE VAPEERFLPE EPVITCLSLT MEGVLSEKSP ETYPSLSELP EEKILDEEAD DAMHPCLSEA VSDEQSSPNV
1001: LGSTNSPVAE AVPQAQISVE EFVGIDPCLV EAVPDMRDLP EEHITSCIYL TNVVPIEEVL PEEPFEACAS LGKLPKDKIS QEESDEATHT LSCAKAESDE
1101: HVSLEVLNST NLSAAEAIPN EQVTLDEFVG IDPCLGEVVL DEEVLPEQLD TTCRSLTKAA PIMTIFPEEP PEVYPSLEEL PEEKIAQEEE VDDATHPYFS
1201: EAVCDEKIPP LEDPGSTHPS LEESVPYEEA SHEELVGTNP FLESAFPNEI GFPDEPGVTY RSSAEAVSKE KNLPEESLPT YPSWAEVVPD EKISREELDS
1301: TYPSSAEAVF DENISGSEAP GSTTETGRQN KTFPEKTFAT ENSLNEAVFD EKIPGSEAST STTETGPHNK TFPEEPFAME NFLNEAVFDE KIPGSEAPVS
1401: TTETGLHNET FTEEPVATDI SLNEAVFGEI IPGSEAPGSA TETGLHNKTF PEKPFATDLS LKEAVFDEKI PGSEASSSTT ETSPHNKTFP RETITTDLSS
1501: TEAVFDEKIT GSGVPSFTTE TGSHNKCFPE EPVPKENILP KEPAAAYLAL AEGIPDQKVF LDDAALLLFA EAIFDQKFSP EVPDSTYPSL KEPEMHVAAP
1601: CVVTDLPAKN IKVKEGEVHN EPYTASDVSM NQKSGLLEPE STERTFPSSG GTVTISPDTQ NSLPNGTSVE SISIWSNGGL LGLAPLKPPV FAEPNSGSQH
1701: IKHEINEASV LSTRKQESSS RSVENAEKSS LPLIVSDPTS QQQSNMSSLS PMQSTGTSFR VFGLSHRLLM AGFRGNSSST CKFESVPSSS YDTRVAAIED
1801: RTQQSPGGSS FEEQLDYESS LFGSPTSSPP VEHMKISFNP IEASPVPKLK LRIPCQPRYN GENADMFPSF QLVPEASNSD DGDDNSDTFC QSSPCVSDYC
1901: LSDSELWESD ESPRISVSSL KQVEERSRHG DMGSFSGSFL DLPCYDAVDH QSTFSRLEQE QVPEYKPSVS EIIRAWPPNQ PKSSPCNEAN VDANTVSKKT
2001: QDQSLGYL
Arabidopsis Description
WAVE5Scar-like domain-containing protein WAVE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPK0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.