Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004857.1-P | Field mustard | plastid | 99.05 | 99.05 |
| CDY48250 | Canola | plastid | 98.1 | 97.18 |
| AT2G44690.1 | Thale cress | plastid | 87.2 | 88.04 |
| VIT_15s0021g01130.t01 | Wine grape | cytosol | 81.99 | 87.37 |
| Solyc01g088780.2.1 | Tomato | cytosol | 83.89 | 85.1 |
| PGSC0003DMT400004254 | Potato | cytosol | 83.41 | 84.62 |
| CDX68116 | Canola | cytosol | 75.36 | 81.54 |
| CDX85925 | Canola | cytosol | 75.36 | 81.54 |
| CDY62937 | Canola | cytosol | 74.88 | 80.61 |
| CDY39066 | Canola | cytosol | 74.88 | 80.61 |
| CDY13528 | Canola | cytosol | 74.88 | 80.61 |
| CDY54338 | Canola | cytosol | 74.88 | 80.2 |
| CDX87656 | Canola | cytosol | 74.41 | 80.1 |
| CDY43414 | Canola | cytosol | 74.41 | 79.7 |
| CDX73206 | Canola | cytosol | 73.93 | 79.59 |
| CDX75480 | Canola | cytosol | 73.46 | 78.28 |
| CDY26832 | Canola | cytosol | 72.04 | 77.16 |
| CDY07816 | Canola | cytosol | 68.72 | 77.13 |
| CDY31409 | Canola | cytosol | 64.93 | 76.54 |
| CDY71157 | Canola | cytosol | 61.14 | 76.33 |
| CDY33284 | Canola | cytosol, plastid | 71.09 | 76.14 |
| CDX90652 | Canola | cytosol, plastid | 71.09 | 76.14 |
| CDY30344 | Canola | cytosol | 71.09 | 76.14 |
| CDY29012 | Canola | cytosol, plastid | 71.09 | 76.14 |
| CDY57592 | Canola | cytosol | 73.46 | 75.98 |
| CDX71303 | Canola | cytosol | 64.45 | 75.98 |
| CDX73732 | Canola | cytosol, plastid | 70.62 | 75.63 |
| CDY59617 | Canola | cytosol, plastid | 70.62 | 75.63 |
| CDX77994 | Canola | cytosol, plastid | 70.62 | 75.63 |
| CDY59407 | Canola | cytosol, plastid | 62.56 | 75.43 |
| CDY20828 | Canola | cytosol | 70.14 | 75.13 |
| CDY58056 | Canola | cytosol | 71.56 | 75.12 |
| CDY57346 | Canola | cytosol | 71.56 | 75.12 |
| CDX77623 | Canola | cytosol | 71.09 | 74.63 |
| CDY67441 | Canola | cytosol | 70.62 | 74.5 |
| CDY24378 | Canola | cytosol | 68.72 | 74.36 |
| CDY29201 | Canola | cytosol | 68.72 | 72.86 |
| CDX69104 | Canola | cytosol | 72.51 | 72.51 |
| CDY02239 | Canola | cytosol | 51.18 | 69.23 |
| CDY06854 | Canola | cytosol | 68.25 | 68.9 |
| CDY35236 | Canola | cytosol | 67.77 | 68.42 |
| CDY56740 | Canola | cytosol | 68.25 | 66.67 |
| CDY45748 | Canola | cytosol | 66.82 | 66.2 |
| CDX89745 | Canola | cytosol | 60.19 | 66.15 |
| CDY30738 | Canola | cytosol | 67.3 | 66.05 |
| CDY00332 | Canola | cytosol | 67.3 | 66.05 |
| CDY02240 | Canola | cytosol | 58.77 | 65.26 |
| CDY68200 | Canola | cytosol | 55.45 | 64.64 |
| CDY69676 | Canola | cytosol | 26.54 | 63.64 |
| CDX89746 | Canola | cytosol | 64.93 | 61.71 |
Protein Annotations
| MapMan:27.4.1 | Gene3D:3.40.50.300 | GO:A0A078JWN9 | UniProt:A0A078JWN9 | EnsemblPlants:CDY71169 | ProteinID:CDY71169 |
| ProteinID:CDY71169.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00011782001 |
| InterPro:IPR003578 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51420 | PANTHER:PTHR24072 |
| PANTHER:PTHR24072:SF160 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | InterPro:Small_GTPase_Rho | TIGRFAMs:TIGR00231 | UniParc:UPI0004EE09E8 | SEG:seg | : |
Description
BnaA05g34500DBnaA05g34500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWN9]
Coordinates
chrLK044762:+:718..2227
Molecular Weight (calculated)
23139.8 Da
IEP (calculated)
9.383
GRAVY (calculated)
-0.080
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MSASVAAASV STTTTTATTF IKCVTVGDGA VGKTCLLISY TSNTFPTDYV PTVFDNFSAN VLVDGKTVNL GLWDTAGQED YNRLRPLSYR GADVFILAFS
101: LISRPSFENI AKKWVPELRH YAPNVPIVLV GTKLDLREDK KFPMNYPGAC TISTEQGQEL RKEIGALAYI ECSSKTQQNV KAVFDAAIKV VLQPPSKTKK
201: QKRRFGFCHA L
101: LISRPSFENI AKKWVPELRH YAPNVPIVLV GTKLDLREDK KFPMNYPGAC TISTEQGQEL RKEIGALAYI ECSSKTQQNV KAVFDAAIKV VLQPPSKTKK
201: QKRRFGFCHA L
001: MSASMAATST SSATATTFIK CVTVGDGAVG KTCLLISYTS NTFPTDYVPT VFDNFNANVL VDGKTVNLGL WDTAGQEDYN RVRPLSYRGA DVFILAFSLI
101: SRPSFENIAK KWVPELRHYA PTVPIVLVGT KSDLRDNMQF PKNYPGACTI FPEQGQELRK EIGALAYIEC SSKAQMNVKA VFDEAIKVVL HPPSKTKKRK
201: RKIGLCHVL
101: SRPSFENIAK KWVPELRHYA PTVPIVLVGT KSDLRDNMQF PKNYPGACTI FPEQGQELRK EIGALAYIEC SSKAQMNVKA VFDEAIKVVL HPPSKTKKRK
201: RKIGLCHVL
Arabidopsis Description
ARAC9ROP8 [Source:UniProtKB/TrEMBL;Acc:A0A178VUK9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.