Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32235 | Canola | cytosol | 94.12 | 97.42 |
| Os03t0328000-01 | Rice | plasma membrane | 13.93 | 93.59 |
| AT4G16340.1 | Thale cress | cytosol | 90.36 | 93.22 |
| GSMUA_Achr10P... | Banana | extracellular | 46.88 | 83.41 |
| Solyc08g016060.1.1 | Tomato | extracellular | 12.5 | 82.81 |
| Solyc08g016050.2.1 | Tomato | nucleus | 39.67 | 82.67 |
| VIT_11s0016g00100.t01 | Wine grape | mitochondrion | 78.6 | 80.35 |
| KRH43411 | Soybean | endoplasmic reticulum | 76.38 | 78.58 |
| KRH13046 | Soybean | endoplasmic reticulum | 75.9 | 78.09 |
| KXG39465 | Sorghum | cytosol | 71.98 | 73.9 |
| HORVU4Hr1G051250.3 | Barley | cytosol | 71.45 | 73.56 |
| TraesCS4A01G131100.1 | Wheat | cytosol | 71.29 | 73.35 |
| TraesCS4B01G173500.4 | Wheat | cytosol | 71.29 | 73.35 |
| TraesCS4D01G175600.4 | Wheat | cytosol | 71.08 | 73.13 |
| Zm00001d047540_P001 | Maize | cytosol, mitochondrion | 71.24 | 72.86 |
| Zm00001d029004_P004 | Maize | cytosol | 71.61 | 72.49 |
| Solyc08g016070.1.1 | Tomato | mitochondrion | 20.82 | 64.01 |
| GSMUA_Achr10P... | Banana | cytosol | 26.54 | 62.01 |
| Zm00001d024153_P001 | Maize | cytosol | 4.5 | 55.92 |
| Zm00001d012342_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 6.09 | 49.57 |
| Zm00001d035539_P001 | Maize | cytosol | 5.3 | 48.78 |
| Zm00001d042645_P001 | Maize | cytosol, nucleus, peroxisome | 12.55 | 40.37 |
| TraesCS5A01G195400.1 | Wheat | cytosol | 2.7 | 37.5 |
| TraesCS5D01G127700.1 | Wheat | cytosol | 2.7 | 35.66 |
| Zm00001d007384_P003 | Maize | cytosol, endoplasmic reticulum, peroxisome | 5.88 | 31.01 |
| Zm00001d035534_P003 | Maize | cytosol | 6.89 | 27.48 |
| Zm00001d046856_P002 | Maize | endoplasmic reticulum, nucleus, peroxisome | 7.57 | 26.83 |
| Zm00001d038664_P001 | Maize | cytosol, nucleus, plastid | 6.83 | 24.11 |
Protein Annotations
| Gene3D:1.20.58.740 | Gene3D:1.25.40.410 | MapMan:27.4.3.2 | GO:A0A078H9M1 | UniProt:A0A078H9M1 | EnsemblPlants:CDY34451 |
| ProteinID:CDY34451 | ProteinID:CDY34451.1 | InterPro:DHR-1_domain | InterPro:DHR-2 | InterPro:DOCK | InterPro:DOCK_C |
| GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0065009 | EnsemblPlantsGene:GSBRNA2T00056544001 | InterPro:IPR027007 | InterPro:IPR027357 | PFAM:PF06920 | PFAM:PF14429 |
| PFscan:PS51650 | PFscan:PS51651 | PANTHER:PTHR23317 | PANTHER:PTHR23317:SF76 | SignalP:SignalP-noTM | UniParc:UPI0004EE400F |
| SEG:seg | : | : | : | : | : |
Description
BnaC01g21820DBnaC01g21820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9M1]
Coordinates
chrLK032334:-:228621..241573
Molecular Weight (calculated)
213187.0 Da
IEP (calculated)
6.130
GRAVY (calculated)
-0.206
Length
1888 amino acids
Sequence
(BLAST)
(BLAST)
0001: MRFSSWLMLL LFFNHNDIPS LIRLVLFLFS RMECNEQYWN QGYLYTNSPN VLPFLLPSSS DAVTDISPIS KPWRTTTTLA FASARFLGSL FLSPSSNLWY
0101: LDGNLEQWPH LNQLVQCYGT EWIKDANKYG HYETTRPDTF QTQIFEGPDT DTETEFHLAS ARSATLDEDV ASVSGTPFTD SGSPKHFGLP PLPAYEPAFD
0201: WENERSMIFG QRTPESPAAS YSSGLKISVR VLSLAFQSGL VEPFYGSISL YNQERKEKLS EDFYFHISPT EMQDANAPSA SVCLLIQLEK TATEEGGVTT
0301: SVYSRKEPVH LTEREKQKLQ VWSRIMPYRE SFAWAVVPLF DNNITTNTGE SASPSSPLTP SMTAASSHDG VFEPMAKITS DGKQGSSGGS SVVVEISNLN
0401: KVKENYSEES IQDPKRKVHK PVKGVLRLEI EKHRNGHGDV EDLSENGSIR NESLDLTDRL GDLTLMKCPS AGSGGPHNSG SKWSTEDVSK NLTSSSGNVD
0501: NCYYAFDFCS TTRNEPFLHL FHCLYVYPVA VTLSRKRNPF IRVELRKDDT DVRKQPLEAI YPREPGVSLQ KWAHTQVAVG ARAASYHDEI KVSLPATWTP
0601: SHHLLFTFFH VDLQTKLEAP RPVVIGYASL PLSTYIHSRS DISLPVMREL VPHYLQETTK ERLDYLEDGK SIFKLRLRLC SSLYPTNERV RDFCLEYDRH
0701: TLRTSPPWGS ELLQAINSLK HVDSTALLQF LYPILNMLLH LIGNGGETLQ VAAFRAMVDI LTRVQQVSFD DADRNRFLVT YVDYSFDDFG GNQPPVYPGL
0801: STVWGSLARS KAKGYRVGPV YDDVLSMAWF FLELIVKSMA LEQARLFDHN LPSGEDVPPM QLKESVFRCI MQLFDCLLTE VHERCKKGLS LAKRLNSSLA
0901: FFCYDLLYII EPCQVYELVS LYMDKFSGVC QSILHECKLT FLQIISDHDL FVEMPGRDPS DRNYLSSILI QELFLSLDHD ELPLRTKGAR ILVILLCKHE
1001: FDARYQKAED KLYIAQLYFP FVGQILDEMP VFYNLNATEK REVLIGVLQI VRNLDDTSLV KAWQQSIART RLYFKLMEEC LILFEHKKAA DSILGGNNSR
1101: GPVSEGTGSP KYSERLSPAI NNYLSEASRQ EVRLEGTPDN GYLWQRVNSQ LASPSQPYSL REALAQAQSS RIGASAQALR ESLHPILRQK LELWEENVSA
1201: TVSLQVLEIT EKFSSMAASH NIATDYGKLD CITTILTSFF SRNQSLAFWK AFFPIFNRIF DLHGATLMAR ENDRFLKQIA FHLLRLAVYR NDSVRKRAVI
1301: GLQILVKSSL YFMQTARLRA LLTITLSELM SDVQVTHMKT DNTLEESGEA RRLQLSLSEM ADEAKSVTLL RECGLPDDTL LVIPGKFTEN RWSWAQVKQL
1401: SDSLVLALDA SLGHALLGSV MAMDRYAAAE SFYKLGMAFA PVPDLHIMWL LHLCDAYQEM QSWAEAAQCA VAVAGVIMQA LVARNDGVWS KDHVSALRKI
1501: CPMVSGEFTT EASAAEVEGY GASKLTVDSA VKYLQLANKL FSQAELYHFC ASILELVIPV YKSRKAYGQL AKCHTLLTNI YESILDQESN PIPFIDATYY
1601: RVGFYGEKFG KLDRKEYVYR EPRDVRLGDI MEKLSHIYES RMDSNHILHI IPDSRQVKAE ELQAGACYLQ ITAVDAVMED EDLGSRRERI FSLSTGSVRA
1701: RVFDRFLFDT PFTKNGKTQG GLEDQWKRRT VLQTEGSFPA LVNRVLVTKS ESLEFSPVEN AIGMIETRTT ALRNELEEPR SSDGDHLPRL QSLQRILQGS
1801: VAVQVNSGVL SVCTAFLSGE PATRLRSQEL QQLIAALLEF MAVCKRAIRV HFRLIGEEDQ EFHTQLVNGF QSLTAELSHY IPAILSEL
0101: LDGNLEQWPH LNQLVQCYGT EWIKDANKYG HYETTRPDTF QTQIFEGPDT DTETEFHLAS ARSATLDEDV ASVSGTPFTD SGSPKHFGLP PLPAYEPAFD
0201: WENERSMIFG QRTPESPAAS YSSGLKISVR VLSLAFQSGL VEPFYGSISL YNQERKEKLS EDFYFHISPT EMQDANAPSA SVCLLIQLEK TATEEGGVTT
0301: SVYSRKEPVH LTEREKQKLQ VWSRIMPYRE SFAWAVVPLF DNNITTNTGE SASPSSPLTP SMTAASSHDG VFEPMAKITS DGKQGSSGGS SVVVEISNLN
0401: KVKENYSEES IQDPKRKVHK PVKGVLRLEI EKHRNGHGDV EDLSENGSIR NESLDLTDRL GDLTLMKCPS AGSGGPHNSG SKWSTEDVSK NLTSSSGNVD
0501: NCYYAFDFCS TTRNEPFLHL FHCLYVYPVA VTLSRKRNPF IRVELRKDDT DVRKQPLEAI YPREPGVSLQ KWAHTQVAVG ARAASYHDEI KVSLPATWTP
0601: SHHLLFTFFH VDLQTKLEAP RPVVIGYASL PLSTYIHSRS DISLPVMREL VPHYLQETTK ERLDYLEDGK SIFKLRLRLC SSLYPTNERV RDFCLEYDRH
0701: TLRTSPPWGS ELLQAINSLK HVDSTALLQF LYPILNMLLH LIGNGGETLQ VAAFRAMVDI LTRVQQVSFD DADRNRFLVT YVDYSFDDFG GNQPPVYPGL
0801: STVWGSLARS KAKGYRVGPV YDDVLSMAWF FLELIVKSMA LEQARLFDHN LPSGEDVPPM QLKESVFRCI MQLFDCLLTE VHERCKKGLS LAKRLNSSLA
0901: FFCYDLLYII EPCQVYELVS LYMDKFSGVC QSILHECKLT FLQIISDHDL FVEMPGRDPS DRNYLSSILI QELFLSLDHD ELPLRTKGAR ILVILLCKHE
1001: FDARYQKAED KLYIAQLYFP FVGQILDEMP VFYNLNATEK REVLIGVLQI VRNLDDTSLV KAWQQSIART RLYFKLMEEC LILFEHKKAA DSILGGNNSR
1101: GPVSEGTGSP KYSERLSPAI NNYLSEASRQ EVRLEGTPDN GYLWQRVNSQ LASPSQPYSL REALAQAQSS RIGASAQALR ESLHPILRQK LELWEENVSA
1201: TVSLQVLEIT EKFSSMAASH NIATDYGKLD CITTILTSFF SRNQSLAFWK AFFPIFNRIF DLHGATLMAR ENDRFLKQIA FHLLRLAVYR NDSVRKRAVI
1301: GLQILVKSSL YFMQTARLRA LLTITLSELM SDVQVTHMKT DNTLEESGEA RRLQLSLSEM ADEAKSVTLL RECGLPDDTL LVIPGKFTEN RWSWAQVKQL
1401: SDSLVLALDA SLGHALLGSV MAMDRYAAAE SFYKLGMAFA PVPDLHIMWL LHLCDAYQEM QSWAEAAQCA VAVAGVIMQA LVARNDGVWS KDHVSALRKI
1501: CPMVSGEFTT EASAAEVEGY GASKLTVDSA VKYLQLANKL FSQAELYHFC ASILELVIPV YKSRKAYGQL AKCHTLLTNI YESILDQESN PIPFIDATYY
1601: RVGFYGEKFG KLDRKEYVYR EPRDVRLGDI MEKLSHIYES RMDSNHILHI IPDSRQVKAE ELQAGACYLQ ITAVDAVMED EDLGSRRERI FSLSTGSVRA
1701: RVFDRFLFDT PFTKNGKTQG GLEDQWKRRT VLQTEGSFPA LVNRVLVTKS ESLEFSPVEN AIGMIETRTT ALRNELEEPR SSDGDHLPRL QSLQRILQGS
1801: VAVQVNSGVL SVCTAFLSGE PATRLRSQEL QQLIAALLEF MAVCKRAIRV HFRLIGEEDQ EFHTQLVNGF QSLTAELSHY IPAILSEL
0001: MENNNLGLRF RKLPRQPLAL PKLDPLLDEN LEQWPHLNQL VQCYGTEWVK DVNKYGHYEN IRPDSFQTQI FEGPDTDTET EIRLASARSA TIEEDVASIS
0101: GRPFSDPGSS KHFGQPPLPA YEPAFDWENE RAMIFGQRTP ESPAASYSSG LKISVRVLSL AFQSGLVEPF FGSIALYNQE RKEKLSEDFY FQIQPTEMQD
0201: AKLSSENRGV FYLDAPSASV CLLIQLEKTA TEEGGVTSSV YSRKEPVHLT EREKQKLQVW SRIMPYRESF AWAVVPLFDN NLTTNTGESA SPSSPLAPSM
0301: TASSSHDGVY EPIAKITSDG KQGYSGGSSV VVEISNLNKV KESYSEESIQ DPKRKVHKPV KGVLRLEIEK HRNGHGDFED LSENGSIIND SLDPTDRLSD
0401: LTLMKCPSSS SGGPRNGCSK WNSEDAKDVS RNLTSSCGTP DLNCYHAFDF CSTTRNEPFL HLFHCLYVYP VAVTLSRKRN PFIRVELRKD DTDIRKQPLE
0501: AIYPREPGVS LQKWVHTQVA VGARAASYHD EIKVSLPATW TPSHHLLFTF FHVDLQTKLE APRPVVVGYA SLPLSTYIHS RSDISLPVMR ELVPHYLQES
0601: TKERLDYLED GKNIFKLRLR LCSSLYPTNE RVRDFCLEYD RHTLQTRPPW GSELLQAINS LKHVDSTALL QFLYPILNML LHLIGNGGET LQVAAFRAMV
0701: DILTRVQQVS FDDADRNRFL VTYVDYSFDD FGGNQPPVYP GLATVWGSLA RSKAKGYRVG PVYDDVLSMA WFFLELIVKS MALEQARLYD HNLPTGEDVP
0801: PMQLKESVFR CIMQLFDCLL TEVHERCKKG LSLAKRLNSS LAFFCYDLLY IIEPCQVYEL VSLYMDKFSG VCQSVLHECK LTFLQIISDH DLFVEMPGRD
0901: PSDRNYLSSI LIQELFLSLD HDELPLRAKG ARILVILLCK HEFDARYQKA EDKLYIAQLY FPFVGQILDE MPVFYNLNAT EKREVLIGVL QIVRNLDDTS
1001: LVKAWQQSIA RTRLYFKLME ECLILFEHKK AADSILGGNN SRGPVSEGAG SPKYSERLSP AINNYLSEAS RQEVRLEGTP DNGYLWQRVN SQLASPSQPY
1101: SLREALAQAQ SSRIGASAQA LRESLHPILR QKLELWEENV SATVSLQVLE ITENFSSMAA SHNIATDYGK LDCITTILTS FFSRNQSLAF WKAFFPIFNR
1201: IFDLHGATLM ARENDRFLKQ IAFHLLRLAV YRNDSVRKRA VIGLQILVKS SLYFMQTARL RALLTITLSE LMSDVQVTHM KSDNTLEESG EARRLQQSLS
1301: EMADEAKSVN LLRECGLPDD TLLIIPEKFT ENRWSWAEVK HLSDSLVLAL DASLGHALLG SVMAMDRYAA AESFYKLGMA FAPVPDLHIM WLLHLCDAHQ
1401: EMQSWAEAAQ CAVAVAGVIM QALVARNDGV WSKDHVSALR KICPMVSGEF TTEASAAEVE GYGASKLTVD SAVKYLQLAN KLFSQAELYH FCASILELVI
1501: PVYKSRKAYG QLAKCHTLLT NIYESILDQE SNPIPFIDAT YYRVGFYGEK FGKLDRKEYV YREPRDVRLG DIMEKLSHIY ESRMDSNHIL HIIPDSRQVK
1601: AEDLQAGVCY LQITAVDAVM EDEDLGSRRE RIFSLSTGSV RARVFDRFLF DTPFTKNGKT QGGLEDQWKR RTVLQTEGSF PALVNRLLVT KSESLEFSPV
1701: ENAIGMIETR TTALRNELEE PRSSDGDHLP RLQSLQRILQ GSVAVQVNSG VLSVCTAFLS GEPATRLRSQ ELQQLIAALL EFMAVCKRAI RVHFRLIGEE
1801: DQEFHTQLVN GFQSLTAELS HYIPAILSEL
0101: GRPFSDPGSS KHFGQPPLPA YEPAFDWENE RAMIFGQRTP ESPAASYSSG LKISVRVLSL AFQSGLVEPF FGSIALYNQE RKEKLSEDFY FQIQPTEMQD
0201: AKLSSENRGV FYLDAPSASV CLLIQLEKTA TEEGGVTSSV YSRKEPVHLT EREKQKLQVW SRIMPYRESF AWAVVPLFDN NLTTNTGESA SPSSPLAPSM
0301: TASSSHDGVY EPIAKITSDG KQGYSGGSSV VVEISNLNKV KESYSEESIQ DPKRKVHKPV KGVLRLEIEK HRNGHGDFED LSENGSIIND SLDPTDRLSD
0401: LTLMKCPSSS SGGPRNGCSK WNSEDAKDVS RNLTSSCGTP DLNCYHAFDF CSTTRNEPFL HLFHCLYVYP VAVTLSRKRN PFIRVELRKD DTDIRKQPLE
0501: AIYPREPGVS LQKWVHTQVA VGARAASYHD EIKVSLPATW TPSHHLLFTF FHVDLQTKLE APRPVVVGYA SLPLSTYIHS RSDISLPVMR ELVPHYLQES
0601: TKERLDYLED GKNIFKLRLR LCSSLYPTNE RVRDFCLEYD RHTLQTRPPW GSELLQAINS LKHVDSTALL QFLYPILNML LHLIGNGGET LQVAAFRAMV
0701: DILTRVQQVS FDDADRNRFL VTYVDYSFDD FGGNQPPVYP GLATVWGSLA RSKAKGYRVG PVYDDVLSMA WFFLELIVKS MALEQARLYD HNLPTGEDVP
0801: PMQLKESVFR CIMQLFDCLL TEVHERCKKG LSLAKRLNSS LAFFCYDLLY IIEPCQVYEL VSLYMDKFSG VCQSVLHECK LTFLQIISDH DLFVEMPGRD
0901: PSDRNYLSSI LIQELFLSLD HDELPLRAKG ARILVILLCK HEFDARYQKA EDKLYIAQLY FPFVGQILDE MPVFYNLNAT EKREVLIGVL QIVRNLDDTS
1001: LVKAWQQSIA RTRLYFKLME ECLILFEHKK AADSILGGNN SRGPVSEGAG SPKYSERLSP AINNYLSEAS RQEVRLEGTP DNGYLWQRVN SQLASPSQPY
1101: SLREALAQAQ SSRIGASAQA LRESLHPILR QKLELWEENV SATVSLQVLE ITENFSSMAA SHNIATDYGK LDCITTILTS FFSRNQSLAF WKAFFPIFNR
1201: IFDLHGATLM ARENDRFLKQ IAFHLLRLAV YRNDSVRKRA VIGLQILVKS SLYFMQTARL RALLTITLSE LMSDVQVTHM KSDNTLEESG EARRLQQSLS
1301: EMADEAKSVN LLRECGLPDD TLLIIPEKFT ENRWSWAEVK HLSDSLVLAL DASLGHALLG SVMAMDRYAA AESFYKLGMA FAPVPDLHIM WLLHLCDAHQ
1401: EMQSWAEAAQ CAVAVAGVIM QALVARNDGV WSKDHVSALR KICPMVSGEF TTEASAAEVE GYGASKLTVD SAVKYLQLAN KLFSQAELYH FCASILELVI
1501: PVYKSRKAYG QLAKCHTLLT NIYESILDQE SNPIPFIDAT YYRVGFYGEK FGKLDRKEYV YREPRDVRLG DIMEKLSHIY ESRMDSNHIL HIIPDSRQVK
1601: AEDLQAGVCY LQITAVDAVM EDEDLGSRRE RIFSLSTGSV RARVFDRFLF DTPFTKNGKT QGGLEDQWKR RTVLQTEGSF PALVNRLLVT KSESLEFSPV
1701: ENAIGMIETR TTALRNELEE PRSSDGDHLP RLQSLQRILQ GSVAVQVNSG VLSVCTAFLS GEPATRLRSQ ELQQLIAALL EFMAVCKRAI RVHFRLIGEE
1801: DQEFHTQLVN GFQSLTAELS HYIPAILSEL
Arabidopsis Description
SPK1Guanine nucleotide exchange factor SPIKE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8SAB7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.