Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0328000-01 | Rice | plasma membrane | 14.73 | 96.8 |
| GSMUA_Achr10P... | Banana | extracellular | 50.3 | 87.56 |
| Solyc08g016060.1.1 | Tomato | extracellular | 13.43 | 87.02 |
| Solyc08g016050.2.1 | Tomato | nucleus | 42.61 | 86.87 |
| KRH43411 | Soybean | endoplasmic reticulum | 86.09 | 86.65 |
| KRH13046 | Soybean | endoplasmic reticulum | 85.87 | 86.43 |
| AT4G16340.1 | Thale cress | cytosol | 82.35 | 83.11 |
| CDY32235 | Canola | cytosol | 81.38 | 82.4 |
| KXG39465 | Sorghum | cytosol | 79.37 | 79.72 |
| HORVU4Hr1G051250.3 | Barley | cytosol | 78.56 | 79.12 |
| TraesCS4B01G173500.4 | Wheat | cytosol | 78.29 | 78.8 |
| TraesCS4D01G175600.4 | Wheat | cytosol | 78.18 | 78.69 |
| TraesCS4A01G131100.1 | Wheat | cytosol | 78.18 | 78.69 |
| Zm00001d047540_P001 | Maize | cytosol, mitochondrion | 78.61 | 78.66 |
| CDY34451 | Canola | endoplasmic reticulum | 80.35 | 78.6 |
| Zm00001d029004_P004 | Maize | cytosol | 78.88 | 78.12 |
| Solyc08g016070.1.1 | Tomato | mitochondrion | 24.26 | 72.96 |
| Bra038448.1-P | Field mustard | cytosol | 81.05 | 72.25 |
| GSMUA_Achr10P... | Banana | cytosol | 31.19 | 71.29 |
| Zm00001d024153_P001 | Maize | cytosol | 5.2 | 63.16 |
| Zm00001d012342_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 7.15 | 56.9 |
| Zm00001d035539_P001 | Maize | cytosol | 5.85 | 52.68 |
| Zm00001d042645_P001 | Maize | cytosol, nucleus, peroxisome | 13.81 | 43.44 |
| TraesCS5D01G127700.1 | Wheat | cytosol | 2.87 | 37.06 |
| TraesCS5A01G195400.1 | Wheat | cytosol | 2.54 | 34.56 |
| Zm00001d007384_P003 | Maize | cytosol, endoplasmic reticulum, peroxisome | 6.01 | 31.01 |
| Zm00001d035534_P003 | Maize | cytosol | 7.31 | 28.54 |
| Zm00001d046856_P002 | Maize | endoplasmic reticulum, nucleus, peroxisome | 7.96 | 27.58 |
| Zm00001d038664_P001 | Maize | cytosol, nucleus, plastid | 7.04 | 24.3 |
Protein Annotations
| Gene3D:1.20.58.740 | Gene3D:1.25.40.410 | EntrezGene:100259293 | wikigene:100259293 | MapMan:27.4.3.2 | InterPro:ARM-type_fold |
| ProteinID:CBI27734 | ProteinID:CBI27734.3 | UniProt:D7TC76 | InterPro:DHR-1_domain | InterPro:DHR-2 | InterPro:DOCK |
| InterPro:DOCK_C | EMBL:FN595756 | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0065009 | InterPro:IPR027007 | InterPro:IPR027357 | EntrezGene:LOC100259293 |
| wikigene:LOC100259293 | PFAM:PF06920 | PFAM:PF14429 | PFscan:PS51650 | PFscan:PS51651 | PANTHER:PTHR23317 |
| PANTHER:PTHR23317:SF76 | SUPFAM:SSF48371 | UniParc:UPI0001984202 | ArrayExpress:VIT_11s0016g00100 | EnsemblPlantsGene:VIT_11s0016g00100 | EnsemblPlants:VIT_11s0016g00100.t01 |
| unigene:Vvi.19389 | RefSeq:XP_002277136 | RefSeq:XP_002277136.1 | RefSeq:XP_010656059.1 | RefSeq:XP_010656060.1 | SEG:seg |
Description
No Description!
Coordinates
chr11:+:51628..134953
Molecular Weight (calculated)
209420.0 Da
IEP (calculated)
6.235
GRAVY (calculated)
-0.230
Length
1847 amino acids
Sequence
(BLAST)
(BLAST)
0001: MENLSPSGHR FRRIPRQSIA ANLKLDPLLD ENLEQWPHLN ELVQCYRTDW VKDENKYGHY ESISPVLFQN QIFEGPDTDI ETEMQLASAR QIKAEDTTDD
0101: DIPSTSGRQF SDATFSDSSH SKVLKHFGQS PLPAYEPAFD WENERSMIFG QRTPETPTTQ YGSGLKISVK VLSLSFQAGL VEPFYGTICL YNRERRDKLS
0201: EDFFFRILPT EMQDACITYE PRGIFYLDVP SASVCLLIQL EKPATEEGGV TSSVYSRKEP VHLTERERQK LQVWSRIMPY RESFAWAIVP LFDNSMSAAS
0301: GGSTSPSSPL APSVSGSSSH EGVSEPTAKI TLDGKLGYSS RSSVIVEISN LNKVKESYTE DSLQDPKRKV HKPVKGVLRL EIEKLQAGHA DLENISESGS
0401: VTNDSIDPGD RIADSTFTKC PSNGSDGPQN SNSKWNFFDG KEIPRNGSNA FGYSDFNADD FQAFDFRSTT RNEPFLQLFH CLYVYPLTVS LSRKRNLFIR
0501: IELRKDDADA RRQPLEAMCM REPGVSLQKW AHTQVAVGAR VACYHDEIKL FLPAIWTPMH HLLFTFFHVD LQTKLEAPKP VVVGYASLPL STHAQLRSEI
0601: SLPIMRELVP HYLQDSGKER LDYLEDGKNI FRLRLRLCSS LYPINERIRD FFLEYDRHTL RTSPPWGSEL LEAINSLKNV DSTALLQFLH PILNMLLHLI
0701: GNGGETLQVA AFRAMVNILT RVQHESVDDA ERNRFLVNYV DYAFDDFGGR QPPVYPGLST VWGSLARSKA KGYRVGPVYD DVLAMAWFFL ELIVKSMALE
0801: QTRLFYHSLP LGEDVPPMQL KEGVFRCILQ LYDCLLTEVH ERCKKGLSLA KRLNSSLAFF CYDLLSIIEP RQVFELVSLY LDKFSGVCQS VLHDCKLTFL
0901: QIICDHDLFV EMPGRDPSDR NYLSSVLIQE LFLTWDHDDL SQRAKAARIL VVLLCKHEFD SRYQKHEDKL YIAQLYFPLI GQILDEMPVF YNLNAVEKRE
1001: VVIVILQIVR NLDDASLVKA WQQSIARTRL FFKLLEECLI LFEHRKPADS MLIGCSSRSP SGDGPVSPKY SDRLSPAINN YLSEASRQEV RPQGTPENGY
1101: LWQRVNSHLS SPSQPYSLRE ALAQAQSSRI GASTQALRES LHPMLRQKLE LWEENLSAAV SLQVLEITEK FSTTAASHSI ATDFGKLDCI TSVFMSFFLR
1201: NQPLVFWKAL FPVFNSVFNL HGATLMSREN DRFLKQVAFH LLRLAVFRND NIRKRAVIGL LILVRSSFYY FMQTARLRVM LTITLSELMS DVQVTQMKSD
1301: GTLEESGEAR RLRKSLEEMA DEARSPNLLR ECGLPENALV VIPEKLSENQ WSLSEVKYLS DSLLLALDAS LEHALLASVM TMDRYSAAES FHKLALAFAP
1401: VPDLHIMWLL HLCDAHQEMQ SWAEAAQCAV AVAGVVMQAL VGRNDGVWSR DHVTALRKIC PMVSREITSE ASAAEVEGYG ASKLTVDSAV KYLQLANKLF
1501: SQAELHHFCA SILELVIPVY KSRRAYGQLA KCHTLLTNIY ESILEQESSP IPFTDATYYR VGFYGEKFGK LDKKEYVYRE PRDVRLGDIM EKLSHIYESR
1601: MDGNHTLHII PDSRQVKADD LQAGVCYLQI TAVDPVMEDE DLGSRRERIF SLSTGTIRAR VFDRFLFDTP FTKNGKTQGG LEDQWKRRTV LQTEGSFPAL
1701: VNRLLVIKSE SLEFSPVENA IGMIETRTAA LRNELEEPRS SEGDQLPRLQ SLQRILQGSV AVQVNSGVLS VCTAFLSGEP ATRLRSQELQ QLIAALLEFM
1801: AVCKRAIRVH FRLIGEEDQD FHTQLVNGFQ SLTAELSHYI PAILSEL
0101: DIPSTSGRQF SDATFSDSSH SKVLKHFGQS PLPAYEPAFD WENERSMIFG QRTPETPTTQ YGSGLKISVK VLSLSFQAGL VEPFYGTICL YNRERRDKLS
0201: EDFFFRILPT EMQDACITYE PRGIFYLDVP SASVCLLIQL EKPATEEGGV TSSVYSRKEP VHLTERERQK LQVWSRIMPY RESFAWAIVP LFDNSMSAAS
0301: GGSTSPSSPL APSVSGSSSH EGVSEPTAKI TLDGKLGYSS RSSVIVEISN LNKVKESYTE DSLQDPKRKV HKPVKGVLRL EIEKLQAGHA DLENISESGS
0401: VTNDSIDPGD RIADSTFTKC PSNGSDGPQN SNSKWNFFDG KEIPRNGSNA FGYSDFNADD FQAFDFRSTT RNEPFLQLFH CLYVYPLTVS LSRKRNLFIR
0501: IELRKDDADA RRQPLEAMCM REPGVSLQKW AHTQVAVGAR VACYHDEIKL FLPAIWTPMH HLLFTFFHVD LQTKLEAPKP VVVGYASLPL STHAQLRSEI
0601: SLPIMRELVP HYLQDSGKER LDYLEDGKNI FRLRLRLCSS LYPINERIRD FFLEYDRHTL RTSPPWGSEL LEAINSLKNV DSTALLQFLH PILNMLLHLI
0701: GNGGETLQVA AFRAMVNILT RVQHESVDDA ERNRFLVNYV DYAFDDFGGR QPPVYPGLST VWGSLARSKA KGYRVGPVYD DVLAMAWFFL ELIVKSMALE
0801: QTRLFYHSLP LGEDVPPMQL KEGVFRCILQ LYDCLLTEVH ERCKKGLSLA KRLNSSLAFF CYDLLSIIEP RQVFELVSLY LDKFSGVCQS VLHDCKLTFL
0901: QIICDHDLFV EMPGRDPSDR NYLSSVLIQE LFLTWDHDDL SQRAKAARIL VVLLCKHEFD SRYQKHEDKL YIAQLYFPLI GQILDEMPVF YNLNAVEKRE
1001: VVIVILQIVR NLDDASLVKA WQQSIARTRL FFKLLEECLI LFEHRKPADS MLIGCSSRSP SGDGPVSPKY SDRLSPAINN YLSEASRQEV RPQGTPENGY
1101: LWQRVNSHLS SPSQPYSLRE ALAQAQSSRI GASTQALRES LHPMLRQKLE LWEENLSAAV SLQVLEITEK FSTTAASHSI ATDFGKLDCI TSVFMSFFLR
1201: NQPLVFWKAL FPVFNSVFNL HGATLMSREN DRFLKQVAFH LLRLAVFRND NIRKRAVIGL LILVRSSFYY FMQTARLRVM LTITLSELMS DVQVTQMKSD
1301: GTLEESGEAR RLRKSLEEMA DEARSPNLLR ECGLPENALV VIPEKLSENQ WSLSEVKYLS DSLLLALDAS LEHALLASVM TMDRYSAAES FHKLALAFAP
1401: VPDLHIMWLL HLCDAHQEMQ SWAEAAQCAV AVAGVVMQAL VGRNDGVWSR DHVTALRKIC PMVSREITSE ASAAEVEGYG ASKLTVDSAV KYLQLANKLF
1501: SQAELHHFCA SILELVIPVY KSRRAYGQLA KCHTLLTNIY ESILEQESSP IPFTDATYYR VGFYGEKFGK LDKKEYVYRE PRDVRLGDIM EKLSHIYESR
1601: MDGNHTLHII PDSRQVKADD LQAGVCYLQI TAVDPVMEDE DLGSRRERIF SLSTGTIRAR VFDRFLFDTP FTKNGKTQGG LEDQWKRRTV LQTEGSFPAL
1701: VNRLLVIKSE SLEFSPVENA IGMIETRTAA LRNELEEPRS SEGDQLPRLQ SLQRILQGSV AVQVNSGVLS VCTAFLSGEP ATRLRSQELQ QLIAALLEFM
1801: AVCKRAIRVH FRLIGEEDQD FHTQLVNGFQ SLTAELSHYI PAILSEL
0001: MENNNLGLRF RKLPRQPLAL PKLDPLLDEN LEQWPHLNQL VQCYGTEWVK DVNKYGHYEN IRPDSFQTQI FEGPDTDTET EIRLASARSA TIEEDVASIS
0101: GRPFSDPGSS KHFGQPPLPA YEPAFDWENE RAMIFGQRTP ESPAASYSSG LKISVRVLSL AFQSGLVEPF FGSIALYNQE RKEKLSEDFY FQIQPTEMQD
0201: AKLSSENRGV FYLDAPSASV CLLIQLEKTA TEEGGVTSSV YSRKEPVHLT EREKQKLQVW SRIMPYRESF AWAVVPLFDN NLTTNTGESA SPSSPLAPSM
0301: TASSSHDGVY EPIAKITSDG KQGYSGGSSV VVEISNLNKV KESYSEESIQ DPKRKVHKPV KGVLRLEIEK HRNGHGDFED LSENGSIIND SLDPTDRLSD
0401: LTLMKCPSSS SGGPRNGCSK WNSEDAKDVS RNLTSSCGTP DLNCYHAFDF CSTTRNEPFL HLFHCLYVYP VAVTLSRKRN PFIRVELRKD DTDIRKQPLE
0501: AIYPREPGVS LQKWVHTQVA VGARAASYHD EIKVSLPATW TPSHHLLFTF FHVDLQTKLE APRPVVVGYA SLPLSTYIHS RSDISLPVMR ELVPHYLQES
0601: TKERLDYLED GKNIFKLRLR LCSSLYPTNE RVRDFCLEYD RHTLQTRPPW GSELLQAINS LKHVDSTALL QFLYPILNML LHLIGNGGET LQVAAFRAMV
0701: DILTRVQQVS FDDADRNRFL VTYVDYSFDD FGGNQPPVYP GLATVWGSLA RSKAKGYRVG PVYDDVLSMA WFFLELIVKS MALEQARLYD HNLPTGEDVP
0801: PMQLKESVFR CIMQLFDCLL TEVHERCKKG LSLAKRLNSS LAFFCYDLLY IIEPCQVYEL VSLYMDKFSG VCQSVLHECK LTFLQIISDH DLFVEMPGRD
0901: PSDRNYLSSI LIQELFLSLD HDELPLRAKG ARILVILLCK HEFDARYQKA EDKLYIAQLY FPFVGQILDE MPVFYNLNAT EKREVLIGVL QIVRNLDDTS
1001: LVKAWQQSIA RTRLYFKLME ECLILFEHKK AADSILGGNN SRGPVSEGAG SPKYSERLSP AINNYLSEAS RQEVRLEGTP DNGYLWQRVN SQLASPSQPY
1101: SLREALAQAQ SSRIGASAQA LRESLHPILR QKLELWEENV SATVSLQVLE ITENFSSMAA SHNIATDYGK LDCITTILTS FFSRNQSLAF WKAFFPIFNR
1201: IFDLHGATLM ARENDRFLKQ IAFHLLRLAV YRNDSVRKRA VIGLQILVKS SLYFMQTARL RALLTITLSE LMSDVQVTHM KSDNTLEESG EARRLQQSLS
1301: EMADEAKSVN LLRECGLPDD TLLIIPEKFT ENRWSWAEVK HLSDSLVLAL DASLGHALLG SVMAMDRYAA AESFYKLGMA FAPVPDLHIM WLLHLCDAHQ
1401: EMQSWAEAAQ CAVAVAGVIM QALVARNDGV WSKDHVSALR KICPMVSGEF TTEASAAEVE GYGASKLTVD SAVKYLQLAN KLFSQAELYH FCASILELVI
1501: PVYKSRKAYG QLAKCHTLLT NIYESILDQE SNPIPFIDAT YYRVGFYGEK FGKLDRKEYV YREPRDVRLG DIMEKLSHIY ESRMDSNHIL HIIPDSRQVK
1601: AEDLQAGVCY LQITAVDAVM EDEDLGSRRE RIFSLSTGSV RARVFDRFLF DTPFTKNGKT QGGLEDQWKR RTVLQTEGSF PALVNRLLVT KSESLEFSPV
1701: ENAIGMIETR TTALRNELEE PRSSDGDHLP RLQSLQRILQ GSVAVQVNSG VLSVCTAFLS GEPATRLRSQ ELQQLIAALL EFMAVCKRAI RVHFRLIGEE
1801: DQEFHTQLVN GFQSLTAELS HYIPAILSEL
0101: GRPFSDPGSS KHFGQPPLPA YEPAFDWENE RAMIFGQRTP ESPAASYSSG LKISVRVLSL AFQSGLVEPF FGSIALYNQE RKEKLSEDFY FQIQPTEMQD
0201: AKLSSENRGV FYLDAPSASV CLLIQLEKTA TEEGGVTSSV YSRKEPVHLT EREKQKLQVW SRIMPYRESF AWAVVPLFDN NLTTNTGESA SPSSPLAPSM
0301: TASSSHDGVY EPIAKITSDG KQGYSGGSSV VVEISNLNKV KESYSEESIQ DPKRKVHKPV KGVLRLEIEK HRNGHGDFED LSENGSIIND SLDPTDRLSD
0401: LTLMKCPSSS SGGPRNGCSK WNSEDAKDVS RNLTSSCGTP DLNCYHAFDF CSTTRNEPFL HLFHCLYVYP VAVTLSRKRN PFIRVELRKD DTDIRKQPLE
0501: AIYPREPGVS LQKWVHTQVA VGARAASYHD EIKVSLPATW TPSHHLLFTF FHVDLQTKLE APRPVVVGYA SLPLSTYIHS RSDISLPVMR ELVPHYLQES
0601: TKERLDYLED GKNIFKLRLR LCSSLYPTNE RVRDFCLEYD RHTLQTRPPW GSELLQAINS LKHVDSTALL QFLYPILNML LHLIGNGGET LQVAAFRAMV
0701: DILTRVQQVS FDDADRNRFL VTYVDYSFDD FGGNQPPVYP GLATVWGSLA RSKAKGYRVG PVYDDVLSMA WFFLELIVKS MALEQARLYD HNLPTGEDVP
0801: PMQLKESVFR CIMQLFDCLL TEVHERCKKG LSLAKRLNSS LAFFCYDLLY IIEPCQVYEL VSLYMDKFSG VCQSVLHECK LTFLQIISDH DLFVEMPGRD
0901: PSDRNYLSSI LIQELFLSLD HDELPLRAKG ARILVILLCK HEFDARYQKA EDKLYIAQLY FPFVGQILDE MPVFYNLNAT EKREVLIGVL QIVRNLDDTS
1001: LVKAWQQSIA RTRLYFKLME ECLILFEHKK AADSILGGNN SRGPVSEGAG SPKYSERLSP AINNYLSEAS RQEVRLEGTP DNGYLWQRVN SQLASPSQPY
1101: SLREALAQAQ SSRIGASAQA LRESLHPILR QKLELWEENV SATVSLQVLE ITENFSSMAA SHNIATDYGK LDCITTILTS FFSRNQSLAF WKAFFPIFNR
1201: IFDLHGATLM ARENDRFLKQ IAFHLLRLAV YRNDSVRKRA VIGLQILVKS SLYFMQTARL RALLTITLSE LMSDVQVTHM KSDNTLEESG EARRLQQSLS
1301: EMADEAKSVN LLRECGLPDD TLLIIPEKFT ENRWSWAEVK HLSDSLVLAL DASLGHALLG SVMAMDRYAA AESFYKLGMA FAPVPDLHIM WLLHLCDAHQ
1401: EMQSWAEAAQ CAVAVAGVIM QALVARNDGV WSKDHVSALR KICPMVSGEF TTEASAAEVE GYGASKLTVD SAVKYLQLAN KLFSQAELYH FCASILELVI
1501: PVYKSRKAYG QLAKCHTLLT NIYESILDQE SNPIPFIDAT YYRVGFYGEK FGKLDRKEYV YREPRDVRLG DIMEKLSHIY ESRMDSNHIL HIIPDSRQVK
1601: AEDLQAGVCY LQITAVDAVM EDEDLGSRRE RIFSLSTGSV RARVFDRFLF DTPFTKNGKT QGGLEDQWKR RTVLQTEGSF PALVNRLLVT KSESLEFSPV
1701: ENAIGMIETR TTALRNELEE PRSSDGDHLP RLQSLQRILQ GSVAVQVNSG VLSVCTAFLS GEPATRLRSQ ELQQLIAALL EFMAVCKRAI RVHFRLIGEE
1801: DQEFHTQLVN GFQSLTAELS HYIPAILSEL
Arabidopsis Description
SPK1Guanine nucleotide exchange factor SPIKE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8SAB7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.