Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G131100.1 | Wheat | cytosol | 99.56 | 99.56 |
| TraesCS4D01G175600.4 | Wheat | cytosol | 99.4 | 99.4 |
| HORVU4Hr1G051250.3 | Barley | cytosol | 98.64 | 98.69 |
| Os03t0328000-01 | Rice | plasma membrane | 14.93 | 97.51 |
| KXG39465 | Sorghum | cytosol | 91.83 | 91.63 |
| Zm00001d047540_P001 | Maize | cytosol, mitochondrion | 90.63 | 90.09 |
| Zm00001d029004_P004 | Maize | cytosol | 90.95 | 89.49 |
| GSMUA_Achr10P... | Banana | extracellular | 50.46 | 87.28 |
| Solyc08g016060.1.1 | Tomato | extracellular | 12.86 | 82.81 |
| Solyc08g016050.2.1 | Tomato | nucleus | 39.95 | 80.91 |
| VIT_11s0016g00100.t01 | Wine grape | mitochondrion | 78.8 | 78.29 |
| KRH43411 | Soybean | endoplasmic reticulum | 76.13 | 76.13 |
| KRH13046 | Soybean | endoplasmic reticulum | 75.59 | 75.59 |
| AT4G16340.1 | Thale cress | cytosol | 75.1 | 75.3 |
| CDY32235 | Canola | cytosol | 74.39 | 74.84 |
| GSMUA_Achr10P... | Banana | cytosol | 31.88 | 72.4 |
| CDY34451 | Canola | endoplasmic reticulum | 73.35 | 71.29 |
| Bra038448.1-P | Field mustard | cytosol | 73.9 | 65.44 |
| Solyc08g016070.1.1 | Tomato | mitochondrion | 20.87 | 62.38 |
Protein Annotations
| Gene3D:1.20.58.740 | Gene3D:1.25.40.410 | MapMan:27.4.3.2 | InterPro:ARM-type_fold | ncoils:Coil | InterPro:DHR-1_domain |
| InterPro:DHR-2 | InterPro:DOCK | InterPro:DOCK_C | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005089 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008064 | GO:GO:0008150 | GO:GO:0008360 | GO:GO:0009605 |
| GO:GO:0009606 | GO:GO:0009628 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009958 | GO:GO:0009987 |
| GO:GO:0010928 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016192 | GO:GO:0019898 | GO:GO:0051493 |
| GO:GO:0070971 | InterPro:IPR027007 | InterPro:IPR027357 | PFAM:PF06920 | PFAM:PF14429 | PFscan:PS51650 |
| PFscan:PS51651 | PANTHER:PTHR23317 | PANTHER:PTHR23317:SF76 | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS4B01G173500 | EnsemblPlants:TraesCS4B01G173500.4 |
| TIGR:cd08679 | TIGR:cd11684 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4B:-:379420567..379433994
Molecular Weight (calculated)
207147.0 Da
IEP (calculated)
6.254
GRAVY (calculated)
-0.242
Length
1835 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDSPAAGEGQ RFKRIPRQPC GRNLELDPLL NENLEQWPHL NELVQCYNAD FVKDDFKYGR YESVAPPSFQ NQIFEGPDTD IETELQLCNA RHSKPEETTE
0101: DDMPSTSGRQ IYETEASASS SKKHCTLSPL PAYEPAFDWD NERSLIFGQR LPESLPATHS SGLKITVKVL SLSFQTGLVE PFSGTICLYN RDRREKLSED
0201: FYFHILPTEM QDAHISLDRR GVFSLDTPSP SICLLIQLEK AATEEGGVTP SIYSRKEPVH LTEKEKQKLQ VWSRVMPYRE PFAWAMIPLF ENNHAGGDAA
0301: SPSSPLAPSM SGSSSQDSIV EPISKLTSDG KLNHYSSGSS VIVEISNLNK VKESYMEDSL QDPKRKVHKP VKGVLRLEVE KLHNDRNEAD TISEGGSITN
0401: ELHDAGELNN GRHSRNSIDG IHSSLNSSAI VKKDTHQNGQ SSNGENGNNF QAFDFRMMAR SEPFSQLFHC LYVYPLTVSL SRKRNLFVRV ELRKDDSDIR
0501: KLPVEAVHPR DQNATLQKCA HTQISVGTRM SCYHDEVKIS LPALLTPQHH LLFTFFHVDL QMKLEAPKPV IVGYAALPLS THIQLLSDVS LPILRELVPH
0601: YLQESGKEKM DYLEDGKTVF RLRLRLCSSL FPVNERIRDF FVEYDRHTLH TSPPWGSELL EAINSLKNVE STALLQFLQP ILNMLLHLIG DGGETLQVAA
0701: FRAMVNILTR VQQESSDGAE RNKFLVNYVD FAFDDFGDRQ TPVYPGLSTV WGSLARSKAK GYRVGPVYDD VLAMAWFFLE LIVKSMGLEQ SRLFYHNLPL
0801: GEDVPPLQLK EGVFRCIMQL FDCLLTEVHE RCKKGLNLAK RLNSTLAFFC YDLLSIIEPR QVFELVSLYM DKFAGVCQSV LHDCKLTFLQ IICDHDLFVE
0901: MPGRDPTDRN YLSSVLIQEI FLTLDHDDLS QRAKAARILV VLICKHEFDA RYQKSEDKLY IAQLYFPLIG QILDEMPVFY NLNAIEKREV LVVILQIIRN
1001: LDDTTLIKAW QQSIARTRLF FKLLEECITH FEHNRTGDSL LLGSSSRSPD AERPASPKYS DRLSPSVNAY LSEASRHEIR PQGTPENGYM WNRISPQLSS
1101: PNQPYSLREA LAQAQSSRIG STARALRESL HPILRQKLEL WEENLSTAVS LEVLGIIDKF SVAAASRSIS TDYAKLDCVT SILMGLLSRS QPLTFWKAFL
1201: PVVYNIFSLH GATLMAREND RFLKQIAFHL LRLAVFRNDS VRKRAVLGLQ ILVRNSFNYF KSTTRLRVML TITLSELLSD VQVTQMKSDG SLEESGEARR
1301: LRKSLEEMAD VRSKDQLNDC GLPVTALEVA AEGSTDNRWS WVEVKHLSKC LVQALDAGLE HALLGSVMSV DRCAAAEGFY KLALAYAPVP DLHIMWLLHL
1401: CDAHQEMQSW AEAAQCAVAV AGVIMQALVG RNDAVWSKEH VASLCRICPI VGTDIGAEVA AAEVEGYGAS KLTVDSAVKY LQLANKLFAQ AELYHFSASI
1501: QELIIPVYKS RRSYGQLAKC HTSLTSIYES ILEQEASPIP FIDATYYRVG FYGERFGKLN KREYVFREPR DVRLGDIMEK LSHTYEAKMD VNHTLHIIPD
1601: SRQVNADELQ PGICYLQITA VDPVMEDEDL ESRRERIFSL STGSVRARVF DRFLFDTPFT KNGKTQGGLE DQWKRRTVLQ TEGSFPALVN RLVVIKSESL
1701: EFSPVENAIG MIETRTAALR NELEEPRSSE GDQLPRLQSL QRILQGSVAV QVNSGVLSVC TAFLSGEPAT RLRSQELQQL IAALLEFMAV CKRAIRVHFR
1801: LIGEEDQEFH TQLVNGFQSL TAELSHYIPA ILSEL
0101: DDMPSTSGRQ IYETEASASS SKKHCTLSPL PAYEPAFDWD NERSLIFGQR LPESLPATHS SGLKITVKVL SLSFQTGLVE PFSGTICLYN RDRREKLSED
0201: FYFHILPTEM QDAHISLDRR GVFSLDTPSP SICLLIQLEK AATEEGGVTP SIYSRKEPVH LTEKEKQKLQ VWSRVMPYRE PFAWAMIPLF ENNHAGGDAA
0301: SPSSPLAPSM SGSSSQDSIV EPISKLTSDG KLNHYSSGSS VIVEISNLNK VKESYMEDSL QDPKRKVHKP VKGVLRLEVE KLHNDRNEAD TISEGGSITN
0401: ELHDAGELNN GRHSRNSIDG IHSSLNSSAI VKKDTHQNGQ SSNGENGNNF QAFDFRMMAR SEPFSQLFHC LYVYPLTVSL SRKRNLFVRV ELRKDDSDIR
0501: KLPVEAVHPR DQNATLQKCA HTQISVGTRM SCYHDEVKIS LPALLTPQHH LLFTFFHVDL QMKLEAPKPV IVGYAALPLS THIQLLSDVS LPILRELVPH
0601: YLQESGKEKM DYLEDGKTVF RLRLRLCSSL FPVNERIRDF FVEYDRHTLH TSPPWGSELL EAINSLKNVE STALLQFLQP ILNMLLHLIG DGGETLQVAA
0701: FRAMVNILTR VQQESSDGAE RNKFLVNYVD FAFDDFGDRQ TPVYPGLSTV WGSLARSKAK GYRVGPVYDD VLAMAWFFLE LIVKSMGLEQ SRLFYHNLPL
0801: GEDVPPLQLK EGVFRCIMQL FDCLLTEVHE RCKKGLNLAK RLNSTLAFFC YDLLSIIEPR QVFELVSLYM DKFAGVCQSV LHDCKLTFLQ IICDHDLFVE
0901: MPGRDPTDRN YLSSVLIQEI FLTLDHDDLS QRAKAARILV VLICKHEFDA RYQKSEDKLY IAQLYFPLIG QILDEMPVFY NLNAIEKREV LVVILQIIRN
1001: LDDTTLIKAW QQSIARTRLF FKLLEECITH FEHNRTGDSL LLGSSSRSPD AERPASPKYS DRLSPSVNAY LSEASRHEIR PQGTPENGYM WNRISPQLSS
1101: PNQPYSLREA LAQAQSSRIG STARALRESL HPILRQKLEL WEENLSTAVS LEVLGIIDKF SVAAASRSIS TDYAKLDCVT SILMGLLSRS QPLTFWKAFL
1201: PVVYNIFSLH GATLMAREND RFLKQIAFHL LRLAVFRNDS VRKRAVLGLQ ILVRNSFNYF KSTTRLRVML TITLSELLSD VQVTQMKSDG SLEESGEARR
1301: LRKSLEEMAD VRSKDQLNDC GLPVTALEVA AEGSTDNRWS WVEVKHLSKC LVQALDAGLE HALLGSVMSV DRCAAAEGFY KLALAYAPVP DLHIMWLLHL
1401: CDAHQEMQSW AEAAQCAVAV AGVIMQALVG RNDAVWSKEH VASLCRICPI VGTDIGAEVA AAEVEGYGAS KLTVDSAVKY LQLANKLFAQ AELYHFSASI
1501: QELIIPVYKS RRSYGQLAKC HTSLTSIYES ILEQEASPIP FIDATYYRVG FYGERFGKLN KREYVFREPR DVRLGDIMEK LSHTYEAKMD VNHTLHIIPD
1601: SRQVNADELQ PGICYLQITA VDPVMEDEDL ESRRERIFSL STGSVRARVF DRFLFDTPFT KNGKTQGGLE DQWKRRTVLQ TEGSFPALVN RLVVIKSESL
1701: EFSPVENAIG MIETRTAALR NELEEPRSSE GDQLPRLQSL QRILQGSVAV QVNSGVLSVC TAFLSGEPAT RLRSQELQQL IAALLEFMAV CKRAIRVHFR
1801: LIGEEDQEFH TQLVNGFQSL TAELSHYIPA ILSEL
0001: MENNNLGLRF RKLPRQPLAL PKLDPLLDEN LEQWPHLNQL VQCYGTEWVK DVNKYGHYEN IRPDSFQTQI FEGPDTDTET EIRLASARSA TIEEDVASIS
0101: GRPFSDPGSS KHFGQPPLPA YEPAFDWENE RAMIFGQRTP ESPAASYSSG LKISVRVLSL AFQSGLVEPF FGSIALYNQE RKEKLSEDFY FQIQPTEMQD
0201: AKLSSENRGV FYLDAPSASV CLLIQLEKTA TEEGGVTSSV YSRKEPVHLT EREKQKLQVW SRIMPYRESF AWAVVPLFDN NLTTNTGESA SPSSPLAPSM
0301: TASSSHDGVY EPIAKITSDG KQGYSGGSSV VVEISNLNKV KESYSEESIQ DPKRKVHKPV KGVLRLEIEK HRNGHGDFED LSENGSIIND SLDPTDRLSD
0401: LTLMKCPSSS SGGPRNGCSK WNSEDAKDVS RNLTSSCGTP DLNCYHAFDF CSTTRNEPFL HLFHCLYVYP VAVTLSRKRN PFIRVELRKD DTDIRKQPLE
0501: AIYPREPGVS LQKWVHTQVA VGARAASYHD EIKVSLPATW TPSHHLLFTF FHVDLQTKLE APRPVVVGYA SLPLSTYIHS RSDISLPVMR ELVPHYLQES
0601: TKERLDYLED GKNIFKLRLR LCSSLYPTNE RVRDFCLEYD RHTLQTRPPW GSELLQAINS LKHVDSTALL QFLYPILNML LHLIGNGGET LQVAAFRAMV
0701: DILTRVQQVS FDDADRNRFL VTYVDYSFDD FGGNQPPVYP GLATVWGSLA RSKAKGYRVG PVYDDVLSMA WFFLELIVKS MALEQARLYD HNLPTGEDVP
0801: PMQLKESVFR CIMQLFDCLL TEVHERCKKG LSLAKRLNSS LAFFCYDLLY IIEPCQVYEL VSLYMDKFSG VCQSVLHECK LTFLQIISDH DLFVEMPGRD
0901: PSDRNYLSSI LIQELFLSLD HDELPLRAKG ARILVILLCK HEFDARYQKA EDKLYIAQLY FPFVGQILDE MPVFYNLNAT EKREVLIGVL QIVRNLDDTS
1001: LVKAWQQSIA RTRLYFKLME ECLILFEHKK AADSILGGNN SRGPVSEGAG SPKYSERLSP AINNYLSEAS RQEVRLEGTP DNGYLWQRVN SQLASPSQPY
1101: SLREALAQAQ SSRIGASAQA LRESLHPILR QKLELWEENV SATVSLQVLE ITENFSSMAA SHNIATDYGK LDCITTILTS FFSRNQSLAF WKAFFPIFNR
1201: IFDLHGATLM ARENDRFLKQ IAFHLLRLAV YRNDSVRKRA VIGLQILVKS SLYFMQTARL RALLTITLSE LMSDVQVTHM KSDNTLEESG EARRLQQSLS
1301: EMADEAKSVN LLRECGLPDD TLLIIPEKFT ENRWSWAEVK HLSDSLVLAL DASLGHALLG SVMAMDRYAA AESFYKLGMA FAPVPDLHIM WLLHLCDAHQ
1401: EMQSWAEAAQ CAVAVAGVIM QALVARNDGV WSKDHVSALR KICPMVSGEF TTEASAAEVE GYGASKLTVD SAVKYLQLAN KLFSQAELYH FCASILELVI
1501: PVYKSRKAYG QLAKCHTLLT NIYESILDQE SNPIPFIDAT YYRVGFYGEK FGKLDRKEYV YREPRDVRLG DIMEKLSHIY ESRMDSNHIL HIIPDSRQVK
1601: AEDLQAGVCY LQITAVDAVM EDEDLGSRRE RIFSLSTGSV RARVFDRFLF DTPFTKNGKT QGGLEDQWKR RTVLQTEGSF PALVNRLLVT KSESLEFSPV
1701: ENAIGMIETR TTALRNELEE PRSSDGDHLP RLQSLQRILQ GSVAVQVNSG VLSVCTAFLS GEPATRLRSQ ELQQLIAALL EFMAVCKRAI RVHFRLIGEE
1801: DQEFHTQLVN GFQSLTAELS HYIPAILSEL
0101: GRPFSDPGSS KHFGQPPLPA YEPAFDWENE RAMIFGQRTP ESPAASYSSG LKISVRVLSL AFQSGLVEPF FGSIALYNQE RKEKLSEDFY FQIQPTEMQD
0201: AKLSSENRGV FYLDAPSASV CLLIQLEKTA TEEGGVTSSV YSRKEPVHLT EREKQKLQVW SRIMPYRESF AWAVVPLFDN NLTTNTGESA SPSSPLAPSM
0301: TASSSHDGVY EPIAKITSDG KQGYSGGSSV VVEISNLNKV KESYSEESIQ DPKRKVHKPV KGVLRLEIEK HRNGHGDFED LSENGSIIND SLDPTDRLSD
0401: LTLMKCPSSS SGGPRNGCSK WNSEDAKDVS RNLTSSCGTP DLNCYHAFDF CSTTRNEPFL HLFHCLYVYP VAVTLSRKRN PFIRVELRKD DTDIRKQPLE
0501: AIYPREPGVS LQKWVHTQVA VGARAASYHD EIKVSLPATW TPSHHLLFTF FHVDLQTKLE APRPVVVGYA SLPLSTYIHS RSDISLPVMR ELVPHYLQES
0601: TKERLDYLED GKNIFKLRLR LCSSLYPTNE RVRDFCLEYD RHTLQTRPPW GSELLQAINS LKHVDSTALL QFLYPILNML LHLIGNGGET LQVAAFRAMV
0701: DILTRVQQVS FDDADRNRFL VTYVDYSFDD FGGNQPPVYP GLATVWGSLA RSKAKGYRVG PVYDDVLSMA WFFLELIVKS MALEQARLYD HNLPTGEDVP
0801: PMQLKESVFR CIMQLFDCLL TEVHERCKKG LSLAKRLNSS LAFFCYDLLY IIEPCQVYEL VSLYMDKFSG VCQSVLHECK LTFLQIISDH DLFVEMPGRD
0901: PSDRNYLSSI LIQELFLSLD HDELPLRAKG ARILVILLCK HEFDARYQKA EDKLYIAQLY FPFVGQILDE MPVFYNLNAT EKREVLIGVL QIVRNLDDTS
1001: LVKAWQQSIA RTRLYFKLME ECLILFEHKK AADSILGGNN SRGPVSEGAG SPKYSERLSP AINNYLSEAS RQEVRLEGTP DNGYLWQRVN SQLASPSQPY
1101: SLREALAQAQ SSRIGASAQA LRESLHPILR QKLELWEENV SATVSLQVLE ITENFSSMAA SHNIATDYGK LDCITTILTS FFSRNQSLAF WKAFFPIFNR
1201: IFDLHGATLM ARENDRFLKQ IAFHLLRLAV YRNDSVRKRA VIGLQILVKS SLYFMQTARL RALLTITLSE LMSDVQVTHM KSDNTLEESG EARRLQQSLS
1301: EMADEAKSVN LLRECGLPDD TLLIIPEKFT ENRWSWAEVK HLSDSLVLAL DASLGHALLG SVMAMDRYAA AESFYKLGMA FAPVPDLHIM WLLHLCDAHQ
1401: EMQSWAEAAQ CAVAVAGVIM QALVARNDGV WSKDHVSALR KICPMVSGEF TTEASAAEVE GYGASKLTVD SAVKYLQLAN KLFSQAELYH FCASILELVI
1501: PVYKSRKAYG QLAKCHTLLT NIYESILDQE SNPIPFIDAT YYRVGFYGEK FGKLDRKEYV YREPRDVRLG DIMEKLSHIY ESRMDSNHIL HIIPDSRQVK
1601: AEDLQAGVCY LQITAVDAVM EDEDLGSRRE RIFSLSTGSV RARVFDRFLF DTPFTKNGKT QGGLEDQWKR RTVLQTEGSF PALVNRLLVT KSESLEFSPV
1701: ENAIGMIETR TTALRNELEE PRSSDGDHLP RLQSLQRILQ GSVAVQVNSG VLSVCTAFLS GEPATRLRSQ ELQQLIAALL EFMAVCKRAI RVHFRLIGEE
1801: DQEFHTQLVN GFQSLTAELS HYIPAILSEL
Arabidopsis Description
SPK1Guanine nucleotide exchange factor SPIKE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8SAB7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.