Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G192400.1 | Wheat | cytosol | 99.06 | 99.06 |
| TraesCS7A01G191400.1 | Wheat | cytosol | 98.59 | 98.59 |
| Os06t0234200-03 | Rice | cytosol | 91.55 | 90.7 |
| EER88130 | Sorghum | cytosol | 90.14 | 89.3 |
| KRH54429 | Soybean | cytosol | 26.29 | 86.15 |
| Solyc03g114070.2.1 | Tomato | cytosol | 84.04 | 85.24 |
| PGSC0003DMT400063229 | Potato | cytosol | 83.57 | 84.76 |
| GSMUA_Achr3P06090_001 | Banana | cytosol, mitochondrion, plastid | 84.51 | 84.11 |
| Bra035878.1-P | Field mustard | cytosol | 80.28 | 83.41 |
| TraesCS6B01G338000.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 83.1 | 83.1 |
| VIT_17s0000g07890.t01 | Wine grape | cytosol | 81.69 | 82.86 |
| KRH57035 | Soybean | cytosol | 81.22 | 82.78 |
| AT3G48040.1 | Thale cress | cytosol | 80.75 | 82.69 |
| HORVU7Hr1G038980.5 | Barley | cytosol | 96.24 | 82.0 |
| Bra010128.1-P | Field mustard | cytosol | 79.34 | 81.25 |
| TraesCS1B01G337200.1 | Wheat | cytosol | 74.65 | 80.71 |
| AT5G62880.1 | Thale cress | cytosol | 81.22 | 80.47 |
| TraesCS6B01G094700.2 | Wheat | cytosol | 74.18 | 80.2 |
| CDY56740 | Canola | cytosol | 81.22 | 80.09 |
| Bra029240.1-P | Field mustard | cytosol | 80.75 | 80.0 |
| CDY30738 | Canola | cytosol | 80.75 | 80.0 |
| KRH63489 | Soybean | cytosol | 79.34 | 79.72 |
| CDY00332 | Canola | cytosol | 80.28 | 79.53 |
| CDY45748 | Canola | cytosol | 78.87 | 78.87 |
| GSMUA_Achr2P00650_001 | Banana | cytosol | 78.4 | 78.4 |
| PGSC0003DMT400063227 | Potato | cytosol | 57.75 | 76.88 |
| CDY68200 | Canola | cytosol | 65.26 | 76.8 |
| KRH54430 | Soybean | cytosol | 52.58 | 76.71 |
| TraesCS1B01G347000.1 | Wheat | cytosol | 71.36 | 71.7 |
| KRH03338 | Soybean | cytosol, plastid | 79.81 | 66.93 |
| Zm00001d044802_P001 | Maize | cytosol | 86.85 | 64.46 |
| TraesCS3B01G180900.1 | Wheat | cytosol | 65.73 | 63.06 |
Protein Annotations
| MapMan:27.4.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016787 | InterPro:IPR003578 |
| InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51420 | PANTHER:PTHR24072 | PANTHER:PTHR24072:SF174 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| InterPro:Small_GTPase_Rho | TIGRFAMs:TIGR00231 | EnsemblPlantsGene:TraesCS7B01G096200 | EnsemblPlants:TraesCS7B01G096200.1 | TIGR:cd04133 | SEG:seg |
Description
No Description!
Coordinates
chr7B:+:111312942..111315856
Molecular Weight (calculated)
23593.6 Da
IEP (calculated)
9.797
GRAVY (calculated)
-0.205
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSASRFIK CVTVGDGAVG KTCMLICYTS NKFPTDYVPT VFDNFSANVV VDGTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLAFSLV SRASYENIMK
101: KWLPELQHHA PSVPIVLVGT KYDLREDKQY LLDHPGVVPV TTAQGEELRK HIGATCYVEC SSKTQQNVKA VFDAAIKVVI KPPTKQRERK KKKARQGCAS
201: LGALSRRKLA CFK
101: KWLPELQHHA PSVPIVLVGT KYDLREDKQY LLDHPGVVPV TTAQGEELRK HIGATCYVEC SSKTQQNVKA VFDAAIKVVI KPPTKQRERK KKKARQGCAS
201: LGALSRRKLA CFK
001: MASSASKFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSVNVV VEGITVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLAFSLI SRASYENVFK
101: KWIPELQHFA PGVPIVLVGT KMDLREDRHY LSDHPGLSPV TTSQGEELRK HIGATYYIEC SSKTQQNVKA VFDAAIKVVI KPAVKQKEKK KKQKPRSGCL
201: SNILCGKN
101: KWIPELQHFA PGVPIVLVGT KMDLREDRHY LSDHPGLSPV TTSQGEELRK HIGATYYIEC SSKTQQNVKA VFDAAIKVVI KPAVKQKEKK KKQKPRSGCL
201: SNILCGKN
Arabidopsis Description
ARAC8ROP10 [Source:UniProtKB/TrEMBL;Acc:A0A178VHB5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.