Factsheet for Os06t0234200-03

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 2
cytosol 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0298700-01
Os03t0328000-01
Os04t0654700-02
Os08t0313200-01
Os09t0115500-01
Os09t0544800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48040.1	Os04t0654700-02	AT1G22920.1	21798944
AT5G62880.1	Os04t0654700-02	AT1G22920.1	21798944
AT5G62880.1	Os03t0298700-01	AT2G38440.1	17267444
AT5G62880.1	Os03t0328000-01	AT4G16340.1	17267444
AT5G62880.1	Os08t0313200-01	AT4G36910.1	21798944
AT5G62880.1	Os09t0115500-01	AT4G36910.1	21798944
AT5G62880.1	Os09t0544800-01	AT4G38430.1	22500990
AT5G62880.1	Os03t0298700-01	AT5G01730.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88130	Sorghum	cytosol	93.49	93.49
TraesCS7A01G191400.1	Wheat	cytosol	91.16	92.02
TraesCS7D01G192400.1	Wheat	cytosol	90.7	91.55
TraesCS7B01G096200.1	Wheat	cytosol	90.7	91.55
Solyc03g114070.2.1	Tomato	cytosol	85.58	87.62
Os02t0742200-01	Rice	cytosol	86.98	87.38
PGSC0003DMT400063229	Potato	cytosol	85.12	87.14
Bra035878.1-P	Field mustard	cytosol	82.33	86.34
KRH54429	Soybean	cytosol	26.05	86.15
KRH57035	Soybean	cytosol	82.79	85.17
VIT_17s0000g07890.t01	Wine grape	cytosol	82.79	84.76
GSMUA_Achr3P06090_001	Banana	cytosol, mitochondrion, plastid	83.72	84.11
AT3G48040.1	Thale cress	cytosol	80.93	83.65
Bra010128.1-P	Field mustard	cytosol	80.47	83.17
Os02t0834000-01	Rice	cytosol	75.81	82.74
Os02t0120800-01	Rice	plasma membrane	75.35	82.23
KRH63489	Soybean	cytosol	80.93	82.08
CDY56740	Canola	cytosol	82.33	81.94
AT5G62880.1	Thale cress	cytosol	81.86	81.86
KRH54430	Soybean	cytosol	55.35	81.51
CDY30738	Canola	cytosol	81.4	81.4
Bra029240.1-P	Field mustard	cytosol	81.4	81.4
CDY00332	Canola	cytosol	80.93	80.93
GSMUA_Achr2P00650_001	Banana	cytosol	80.0	80.75
CDY45748	Canola	cytosol	79.53	80.28
CDY68200	Canola	cytosol	66.98	79.56
Os02t0312600-01	Rice	cytosol	72.56	79.19
PGSC0003DMT400063227	Potato	cytosol	58.14	78.12
HORVU7Hr1G038980.5	Barley	cytosol	89.77	77.2
Os05t0513800-01	Rice	plasma membrane	73.02	73.36
Os01t0540300-00	Rice	cytosol	29.77	71.91
Os01t0229400-02	Rice	endoplasmic reticulum, plasma membrane	71.16	71.5
KRH03338	Soybean	cytosol, plastid	81.4	68.9
Zm00001d044802_P001	Maize	cytosol	88.37	66.2
Os11t0303400-02	Rice	cytosol	24.19	45.22

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	EntrezGene:4340590	EMBL:AF380335	EMBL:AK061102	ProteinID:BAD37775.1
ProteinID:BAD37916.1	ProteinID:BAF19150.1	ProteinID:BAS96939.1	ProteinID:EEE65396.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	InterPro:IPR003578	EnsemblPlantsGene:Os06g0234200	EnsemblPlants:Os06t0234200-03
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF174
UniProt:Q67VP4	SMART:SM00173	SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	InterPro:Small_GTPase_Rho	TIGRFAMs:TIGR00231	UniParc:UPI00000A7875	RefSeq:XP_015641323.1	SEG:seg

Description

RAC/ROP-TYPE GTPASE 4Similar to Rac-like GTP-binding protein 4. (Os06t0234200-01);Similar to Rac-like GTP-binding protein 4. (Os06t0234200-02);Similar to RAC-like GTP binding protein ARAC8 (GTPase protein ROP10). (Os06t0234200-03)

Coordinates

chr6:+:6990980..6994527

Molecular Weight (calculated)

24080.3 Da

IEP (calculated)

9.911

GRAVY (calculated)

-0.183

Length

215 amino acids

Sequence
(BLAST)

001: MASSASRFIK CVTVGDGAVG KTCMLICYTS NKFPTDYVPT VFDNFSANVV VDGTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLAFSLV SRASYENVMK
101: KWLPELQHYA PGVPIVLVGT KLDLREDKHY LLDHPSLVPV TTAQGEELRK HIGATCYIEC SSKTQQNVKA VFDAAIKVVI KPPTKQRDRK KKKTRRGCSF
201: FCKGVMSRRR LVCFK

Best Arabidopsis Sequence Match ( AT3G48040.1 )
(BLAST)

001: MASSASKFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSVNVV VEGITVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLAFSLI SRASYENVFK
101: KWIPELQHFA PGVPIVLVGT KMDLREDRHY LSDHPGLSPV TTSQGEELRK HIGATYYIEC SSKTQQNVKA VFDAAIKVVI KPAVKQKEKK KKQKPRSGCL
201: SNILCGKN

Arabidopsis Description

ARAC8ROP10 [Source:UniProtKB/TrEMBL;Acc:A0A178VHB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.