Factsheet for Zm00001d044802_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

golgi 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002027_P002
Zm00001d004354_P001
Zm00001d006269_P001
Zm00001d007384_P003
Zm00001d012342_P001
Zm00001d021464_P002
Zm00001d024153_P001
Zm00001d028803_P002
Zm00001d029004_P004
Zm00001d035534_P003
Zm00001d035539_P001
Zm00001d038664_P001
Zm00001d042645_P001
Zm00001d046856_P002
Zm00001d047540_P001
Zm00001d047701_P002
Zm00001d050130_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48040.1	Zm00001d002027_P002	AT1G22920.1	21798944
AT5G62880.1	Zm00001d002027_P002	AT1G22920.1	21798944
AT5G62880.1	Zm00001d028803_P002	AT2G38440.1	17267444
AT5G62880.1	Zm00001d047701_P002	AT2G38440.1	17267444
AT5G62880.1	Zm00001d007384_P003	AT4G16340.1	17267444
AT5G62880.1	Zm00001d012342_P001	AT4G16340.1	17267444
AT5G62880.1	Zm00001d024153_P001	AT4G16340.1	17267444
AT5G62880.1	Zm00001d029004_P004	AT4G16340.1	17267444
AT5G62880.1	Zm00001d035534_P003	AT4G16340.1	17267444
AT5G62880.1	Zm00001d035539_P001	AT4G16340.1	17267444
AT5G62880.1	Zm00001d038664_P001	AT4G16340.1	17267444
AT5G62880.1	Zm00001d042645_P001	AT4G16340.1	17267444
AT5G62880.1	Zm00001d046856_P002	AT4G16340.1	17267444
AT5G62880.1	Zm00001d047540_P001	AT4G16340.1	17267444
AT5G62880.1	Zm00001d004354_P001	AT4G36910.1	21798944
AT5G62880.1	Zm00001d050130_P003	AT4G36910.1	21798944
AT5G62880.1	Zm00001d006269_P001	AT4G38430.1	22500990
AT5G62880.1	Zm00001d021464_P002	AT4G38430.1	22500990
AT5G62880.1	Zm00001d028803_P002	AT5G01730.1	17267444
AT5G62880.1	Zm00001d047701_P002	AT5G01730.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88130	Sorghum	cytosol	68.29	91.16
Os06t0234200-03	Rice	cytosol	66.2	88.37
KRH54429	Soybean	cytosol	19.86	87.69
TraesCS7B01G096200.1	Wheat	cytosol	64.46	86.85
TraesCS7D01G192400.1	Wheat	cytosol	64.11	86.39
TraesCS7A01G191400.1	Wheat	cytosol	64.11	86.39
Solyc03g114070.2.1	Tomato	cytosol	61.67	84.29
AT3G48040.1	Thale cress	cytosol	60.98	84.13
Bra035878.1-P	Field mustard	cytosol	59.93	83.9
PGSC0003DMT400063229	Potato	cytosol	61.32	83.81
KRH57035	Soybean	cytosol	60.63	83.25
Zm00001d018573_P002	Maize	mitochondrion	57.14	83.25
Zm00001d015036_P005	Maize	cytosol	57.14	83.25
GSMUA_Achr3P06090_001	Banana	cytosol, mitochondrion, plastid	62.02	83.18
Bra010128.1-P	Field mustard	cytosol	59.93	82.69
VIT_17s0000g07890.t01	Wine grape	cytosol	60.28	82.38
Bra029240.1-P	Field mustard	cytosol	60.98	81.4
CDY30738	Canola	cytosol	60.98	81.4
KRH63489	Soybean	cytosol	59.93	81.13
AT5G62880.1	Thale cress	cytosol	60.63	80.93
CDY45748	Canola	cytosol	59.58	80.28
CDY00332	Canola	cytosol	59.93	80.0
CDY56740	Canola	cytosol	59.93	79.63
PGSC0003DMT400063227	Potato	cytosol	43.55	78.12
GSMUA_Achr2P00650_001	Banana	cytosol	57.49	77.46
CDY68200	Canola	cytosol	48.08	76.24
KRH54430	Soybean	cytosol	38.68	76.03
HORVU7Hr1G038980.5	Barley	cytosol	65.85	75.6
Zm00001d010732_P002	Maize	plasma membrane	54.7	74.06
Zm00001d038688_P002	Maize	cytosol	55.75	73.73
KRH03338	Soybean	cytosol, plastid	62.37	70.47
Zm00001d052273_P004	Maize	plastid	52.26	69.12
Zm00001d053899_P001	Maize	cytosol	54.36	67.24
Zm00001d037911_P008	Maize	cytosol	53.31	65.38
Zm00001d018004_P002	Maize	cytosol, peroxisome, plastid	64.11	36.36

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	UniProt:A0A1D6NRH3	ProteinID:AQL00901.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016787	InterPro:IPR003578	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF174	SMART:SM00173	SMART:SM00174	SMART:SM00175
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho	TIGRFAMs:TIGR00231	UniParc:UPI0008451117
EnsemblPlantsGene:Zm00001d044802	EnsemblPlants:Zm00001d044802_P001	EnsemblPlants:Zm00001d044802_T001	SEG:seg	:	:

Description

Rho-related protein from plants 5 Rho-related protein from plants 5

Coordinates

chr9:-:2773748..2789581

Molecular Weight (calculated)

31766.4 Da

IEP (calculated)

9.997

GRAVY (calculated)

-0.272

Length

287 amino acids

Sequence
(BLAST)

001: MQHSGQRDKK CGRDGPSSRT AEVRTGERPQ QTRDRRERAS KPSIVTSLCF SLSSLLVFCK KPVTVSVSLI PFHHSAGLPL PPLVLAMASS ASRFIKCVTV
101: GDGAVGKTCM LICYTSNKFP TDYIPTVFDN FSANVVVDGT TVNLGLWDTA GQEDYNRLRP LSYRGADVFV LAFSLVSRAS YENVMKKWLP ELQHYAPGVP
201: IVLAGTKLDL REDRHYLVDH PGAVPVTTAQ GEELRKHIGA TCYIECSSKT QQNVKAVFDA AIKVVIRPPT KQRERKKKKE RRGCSIL

Best Arabidopsis Sequence Match ( AT3G48040.1 )
(BLAST)

001: MASSASKFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSVNVV VEGITVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLAFSLI SRASYENVFK
101: KWIPELQHFA PGVPIVLVGT KMDLREDRHY LSDHPGLSPV TTSQGEELRK HIGATYYIEC SSKTQQNVKA VFDAAIKVVI KPAVKQKEKK KKQKPRSGCL
201: SNILCGKN

Arabidopsis Description

ARAC8ROP10 [Source:UniProtKB/TrEMBL;Acc:A0A178VHB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.