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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 2
  • plastid 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G340900.1 Wheat cytosol 87.24 70.08
TraesCS5B01G339200.1 Wheat cytosol 87.5 69.57
TraesCS5D01G346100.1 Wheat cytosol 87.24 69.21
EER99291 Sorghum nucleus, plastid 95.83 65.83
Os09t0544800-01 Rice nucleus 92.19 63.1
Zm00001d021464_P002 Maize nucleus, plastid 94.01 62.56
HORVU5Hr1G085510.1 Barley nucleus, plastid 86.72 58.83
GSMUA_Achr3P14650_001 Banana nucleus 75.78 51.23
GSMUA_Achr1P18140_001 Banana nucleus 70.83 49.19
VIT_03s0038g03620.t01 Wine grape cytosol 74.48 48.72
PGSC0003DMT400047997 Potato nucleus 70.83 47.14
Solyc01g111930.2.1 Tomato nucleus 70.83 47.14
GSMUA_Achr10P... Banana cytosol 63.54 47.1
KRH24128 Soybean cytosol 68.75 46.48
KRH29101 Soybean cytosol, plastid 68.23 46.29
AT4G38430.1 Thale cress nucleus 63.28 44.34
Bra015010.1-P Field mustard cytosol 62.76 44.06
CDX77457 Canola cytosol 62.76 44.06
CDX85176 Canola cytosol 62.5 43.88
GSMUA_Achr2P03580_001 Banana nucleus 57.55 43.59
VIT_18s0001g00550.t01 Wine grape cytosol 56.25 40.6
Zm00001d012691_P001 Maize cytosol, extracellular, mitochondrion, plastid 29.17 39.02
PGSC0003DMT400025800 Potato nucleus 51.3 35.88
Solyc04g082110.2.1 Tomato nucleus 40.62 34.59
Zm00001d047899_P001 Maize cytosol 24.74 34.17
Zm00001d042861_P001 Maize cytosol 47.66 31.94
Zm00001d010062_P001 Maize peroxisome 47.92 31.89
Zm00001d002696_P001 Maize cytosol 38.28 31.82
Zm00001d021489_P001 Maize nucleus, plastid 37.24 30.82
Zm00001d029850_P001 Maize nucleus, plastid 38.54 30.27
Zm00001d053307_P002 Maize cytosol, plastid 36.2 28.78
Zm00001d016001_P002 Maize mitochondrion 36.72 26.4
Zm00001d038989_P002 Maize nucleus, plastid 34.9 26.27
Zm00001d043383_P001 Maize nucleus 34.64 25.43
Zm00001d023356_P001 Maize cytosol 23.18 25.07
Zm00001d037119_P001 Maize plastid 27.86 24.83
Zm00001d009549_P002 Maize mitochondrion 35.68 24.82
Zm00001d049679_P001 Maize plastid 27.08 23.53
Zm00001d051553_P004 Maize cytosol 31.51 22.41
Zm00001d017755_P002 Maize cytosol 31.25 22.18
Zm00001d043889_P001 Maize mitochondrion 34.9 22.15
Protein Annotations
Gene3D:1.20.58.2010MapMan:27.4.3.1UniProt:A0A1D6EU95GO:GO:0003674GO:GO:0003824GO:GO:0005085
GO:GO:0005089GO:GO:0005488GO:GO:0005515GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0065009InterPro:IPR005512ProteinID:ONM23241.1
PFAM:PF03759InterPro:PRONE_domPFscan:PS51334PANTHER:PTHR33101PANTHER:PTHR33101:SF6InterPro:RopGEF
UniParc:UPI000843E444EnsemblPlantsGene:Zm00001d006269EnsemblPlants:Zm00001d006269_P001EnsemblPlants:Zm00001d006269_T001SEG:seg:
Description
Pollen-specific kinase partner protein
Coordinates
chr2:-:203287605..203291066
Molecular Weight (calculated)
42500.8 Da
IEP (calculated)
7.970
GRAVY (calculated)
-0.422
Length
384 amino acids
Sequence
(BLAST)
001: MVPRPRSDLY MNLPALKKLD AMLLAMIDGF KDTEFWYVDR GVMVEDSGGP FPSSSSSSCG RPSVRQEDKW WLPCPRVPPK GLSEDARRKL QQSRDCANQI
101: LKAAMAINSD VLAEMEIPEV YLETLPKNGK SCLGEIIYRY ITAEQFSPEC LLDCLDLSSE HHTLEVANRI EGAIHVWKLK GQKKSTPQAK SKISWGGKVK
201: GLVGDKEKSH TLSERADGLL QSLRLRYPGL PQTSLDMNKI QYNKDVGQSI LECYSRVLES LAFNIIARID DVIYVDDATN RSAAAESVSI FNRGTGVPVQ
301: KRISPSPFSI QNSPYGSPFA TPTFCSSTPV TGSPGRVQPP LNKNILGTQE IKVEKLFSGD LEKVWTYAGN LSARKDAGDA PERD
Best Arabidopsis Sequence Match ( AT3G55660.1 )
(BLAST)
001: MEDNSCIGFE GSKRFGETSK RIIGLIDSVT ESTTDSSLSS SSSGVGSSSG RSSVAERSVS SPPTKSQILG WPLGQGSWRK SSGKMKKKTP TKIDDFGFKR
101: VGTETSEIEL LKERMAKLLL GEDMSGSGEG VCPALAISNA ITNLYAAILG QQWRLEPIPS EKKLMWRREI EVLLSVSDHI VELVPSFQNF PNGNKIEVMN
201: CRPRSDLFTC LPALRKLDNM LIEILDSFGE TEFWYVDQGI VAAESARSNS FREDGDKWWL PLPRVPSDGL TEQTRKKLDH TREFTNQILK ACMSINSIAL
301: AEMEVPQSYL EALPKNGRSC LGDFLYRNIT SDNFSADHLL ESIDLSSELA VVEMANRVEA SMYVWRRRAH SRHLISLYRS TSTRWGMIVK EMMMHQTDGD
401: KREIFAERAE SLLIRLKQRF PGLRQTALDT SKIQYNKDVG KSILESYSRV LESLAYSIGV RIEEVLFMDD ISKDDGDGDD DSCSDKLRLL SKEAASGGSG
501: SLREKLSAPS LFSVSFSGTS TPYRTLSFSA STPSYSPMPL ISPINGGRGG ERAPFLSGRN IRERCGFGPK KALANYLRG
Arabidopsis Description
ROPGEF6Rop guanine nucleotide exchange factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M056]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.