Factsheet for Zm00001d016001_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84790	Sorghum	cytosol	79.21	96.14
Zm00001d053307_P002	Maize	cytosol, plastid	85.02	94.0
TraesCS6A01G196000.1	Wheat	cytosol	73.97	90.6
TraesCSU01G211800.1	Wheat	cytosol	54.31	88.96
TraesCSU01G217800.1	Wheat	cytosol	55.24	86.76
TraesCSU01G211700.1	Wheat	cytosol	55.24	86.76
TraesCS6D01G183300.1	Wheat	mitochondrion	80.71	84.68
Os02t0272300-01	Rice	plasma membrane	80.9	84.21
HORVU6Hr1G050860.4	Barley	mitochondrion	76.78	81.51
GSMUA_Achr6P14020_001	Banana	cytosol	54.12	67.05
Solyc07g032730.2.1	Tomato	nucleus	47.75	62.35
GSMUA_Achr3P03410_001	Banana	nucleus	58.43	61.66
KRH44350	Soybean	nucleus	51.12	60.13
Solyc06g066650.2.1	Tomato	nucleus	52.25	59.49
PGSC0003DMT400042632	Potato	nucleus	51.31	58.55
Zm00001d012691_P001	Maize	cytosol, extracellular, mitochondrion, plastid	31.09	57.84
Solyc03g120650.2.1	Tomato	cytosol	52.81	56.18
PGSC0003DMT400006531	Potato	cytosol	52.62	55.98
KRH09881	Soybean	cytosol	54.49	54.6
KRH23439	Soybean	nucleus	54.49	54.49
Solyc12g044270.1.1	Tomato	nucleus	53.56	54.48
KRH47282	Soybean	nucleus	53.75	53.35
CDY44926	Canola	nucleus	49.25	53.24
Bra020048.1-P	Field mustard	nucleus	49.25	53.24
PGSC0003DMT400040374	Potato	nucleus	46.82	53.19
AT5G19560.4	Thale cress	mitochondrion	50.75	52.93
CDY42277	Canola	nucleus	48.88	52.83
Zm00001d043383_P001	Maize	nucleus	51.5	52.58
KRH39304	Soybean	nucleus	50.94	52.31
Zm00001d038989_P002	Maize	nucleus, plastid	49.81	52.16
CDY58963	Canola	cytosol	36.33	52.15
PGSC0003DMT400097197	Potato	nucleus	54.31	51.51
CDX88884	Canola	cytosol, plastid	47.0	51.43
Bra006510.1-P	Field mustard	cytosol	47.0	51.43
Solyc12g007150.1.1	Tomato	nucleus	53.18	51.17
KRH48369	Soybean	mitochondrion	53.75	51.07
CDX92519	Canola	plastid	47.38	50.91
PGSC0003DMT400001020	Potato	nucleus	52.62	50.63
CDX70882	Canola	cytosol	47.19	49.9
VIT_11s0016g03740.t01	Wine grape	nucleus	51.69	49.73
Bra002246.1-P	Field mustard	plastid	47.38	48.94
Zm00001d009549_P002	Maize	mitochondrion	48.69	47.1
Zm00001d043889_P001	Maize	mitochondrion	49.25	43.47
Zm00001d002696_P001	Maize	cytosol	32.58	37.66
Zm00001d006269_P001	Maize	cytosol	26.4	36.72
Zm00001d021489_P001	Maize	nucleus, plastid	31.09	35.78
Zm00001d029850_P001	Maize	nucleus, plastid	32.4	35.38
Zm00001d021464_P002	Maize	nucleus, plastid	37.64	34.84
Zm00001d042861_P001	Maize	cytosol	36.89	34.38
Zm00001d010062_P001	Maize	peroxisome	36.14	33.45
Zm00001d017755_P002	Maize	cytosol	31.09	30.68
Zm00001d051553_P004	Maize	cytosol	30.9	30.56
Zm00001d047899_P001	Maize	cytosol	14.23	27.34
Zm00001d023356_P001	Maize	cytosol	15.92	23.94
Zm00001d037119_P001	Maize	plastid	18.16	22.51
Zm00001d049679_P001	Maize	plastid	18.54	22.4

Protein Annotations

Gene3D:1.20.58.1310	Gene3D:1.20.58.2010	EntrezGene:103626931	MapMan:27.4.3.1	UniProt:A0A1D6H4Z9	ProteinID:AQK69900.1
GO:GO:0003674	GO:GO:0005085	GO:GO:0005089	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0065009	InterPro:IPR005512	PFAM:PF03759	InterPro:PRONE_dom	PFscan:PS51334	PANTHER:PTHR33101
PANTHER:PTHR33101:SF16	InterPro:RopGEF	UniParc:UPI000843C683	EnsemblPlantsGene:Zm00001d016001	EnsemblPlants:Zm00001d016001_P002	EnsemblPlants:Zm00001d016001_T002
SEG:seg	:	:	:	:	:

Description

Rop guanine nucleotide exchange factor 9

Coordinates

chr5:-:138743751..138746834

Molecular Weight (calculated)

59867.3 Da

IEP (calculated)

6.225

GRAVY (calculated)

-0.489

Length

534 amino acids

Sequence
(BLAST)

001: MVRFLRRGHS LHKTGSHNSN QQQQLLRERY LDRSGSDTGE MYSNGAGGTP PLANSQAAAA GAARLRQGRD GPLSELDVMK EKFAKLLLGE DMSGTGKGVP
101: SALALSNAVT NLAASVFGEH RKLEPMAPDT KERWKREVGW LLSVTDHIVE FVPTRHTSEN GITMEIMSTA QRRDLAMNIP ALRKLDAMLL GYMDNFADQT
201: EFWYEKGGDN KRDDDKWWMP TVKVPSEGLS DVTRKWLQYQ KECVNQVLKA AMAINAQVLV EMEIPEVYIE SLPKANFLLS LTLDRSIQSK GKTSLGDAIY
301: RSITEDTFDP VEFLAGMDLS TEHKVLDLKN RIEASTVIWK RKMQTNKDSK SSWSSIVSFE KREQFEERAE TILHLLKLQF PGTPQSQLDI SKIQYNRDVG
401: YALLESYSRV LESLAYSVMS RIEDVLSADA AAQNLTATEA ARRVLESADL LAPRKLDAKE ELEKLNEAPA SMTLFDFMGW HFDQDELMKR REDGTLDADG
501: EAMLLKKAPS VAPKKFSYVD SLSSGGMRSP SARH

Best Arabidopsis Sequence Match ( AT5G19560.5 )
(BLAST)

001: MFDGRNSGHS SFSSRGDGMH TPEHELAGHA APSTRRGKQN RRSDMEVMKE RFAKLLLGED MSGGGTGETS ALALSNAITK LADSMFGEQM KLQPMYPETK
101: ENWRKEMGWL LSVIDHIVQF VPSRQMGKNG QFTEIMVTKQ RDDLLTNIPA LRKLDSVLLE TLDNFKDQKD FWYVPRDMED ADHNGDWRRD ENWWLPVVKV
201: PTDGLSEESR RWLQNQKDSV AQVLKAATAI NAHVLSEMHV PENYIDSLPK NGKTSLGDFL YKSITEESFD PDYFVSFLDL STEHKVLDLK NRIEASMVIW
301: KRKMCQKEKD GKSQWGSTVS LEKRELFEVR AETILVMLKQ QFPGIPQSSL EVSKIKNNKD VGQAILESYS RVLESLASKI MSRIEDVLEA DRLVQRQLMG
401: EAETRSESEA ESEYEETEKV VAAETPNSRK LSDFIGWRLS SDTKKHSSMS DIEFFHKVEQ EKEKPMMKSP RALPKKFSYL AKLENMRSPS DRH

Arabidopsis Description

ATROPGEF10ROP uanine nucleotide exchange factor 10 [Source:TAIR;Acc:AT5G19560]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.