Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58963 | Canola | cytosol | 62.11 | 85.48 |
| CDX92519 | Canola | plastid | 82.81 | 85.31 |
| CDY44926 | Canola | nucleus | 82.03 | 85.02 |
| Bra020048.1-P | Field mustard | nucleus | 81.84 | 84.82 |
| CDY42277 | Canola | nucleus | 81.45 | 84.41 |
| Bra002246.1-P | Field mustard | plastid | 82.81 | 82.01 |
| Bra006510.1-P | Field mustard | cytosol | 73.44 | 77.05 |
| CDX88884 | Canola | cytosol, plastid | 72.85 | 76.43 |
| CDX70882 | Canola | cytosol | 73.63 | 74.65 |
| GSMUA_Achr5P06900_001 | Banana | cytosol | 51.17 | 62.23 |
| GSMUA_Achr2P09130_001 | Banana | cytosol | 46.29 | 60.61 |
| GSMUA_Achr6P14020_001 | Banana | cytosol | 50.98 | 60.56 |
| TraesCS6A01G196000.1 | Wheat | cytosol | 51.17 | 60.09 |
| OQU84790 | Sorghum | cytosol | 51.37 | 59.77 |
| GSMUA_Achr4P10530_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 49.22 | 58.47 |
| Zm00001d053307_P002 | Maize | cytosol, plastid | 52.54 | 55.69 |
| TraesCSU01G211800.1 | Wheat | cytosol | 35.35 | 55.52 |
| AT4G13240.1 | Thale cress | nucleus | 55.08 | 54.55 |
| GSMUA_Achr3P03410_001 | Banana | nucleus | 53.52 | 54.15 |
| TraesCSU01G211700.1 | Wheat | cytosol | 35.74 | 53.82 |
| TraesCSU01G217800.1 | Wheat | cytosol | 35.74 | 53.82 |
| AT3G24620.1 | Thale cress | nucleus | 54.88 | 53.73 |
| Os02t0272300-01 | Rice | plasma membrane | 53.71 | 53.61 |
| TraesCS6D01G183300.1 | Wheat | mitochondrion | 52.73 | 53.05 |
| HORVU6Hr1G050860.4 | Barley | mitochondrion | 51.95 | 52.88 |
| GSMUA_Achr3P15410_001 | Banana | nucleus | 50.59 | 52.22 |
| Zm00001d016001_P002 | Maize | mitochondrion | 52.93 | 50.75 |
| AT1G79860.1 | Thale cress | nucleus | 50.59 | 50.29 |
| VIT_11s0016g03740.t01 | Wine grape | nucleus | 54.3 | 50.09 |
| AT1G52240.1 | Thale cress | nucleus | 50.39 | 47.51 |
| AT3G16130.1 | Thale cress | nucleus | 42.97 | 40.89 |
| AT4G00460.2 | Thale cress | nucleus | 32.23 | 34.88 |
| AT2G45890.1 | Thale cress | nucleus, plastid | 31.45 | 34.77 |
| AT4G38430.1 | Thale cress | nucleus | 36.52 | 34.12 |
| AT5G02010.1 | Thale cress | nucleus | 36.33 | 34.07 |
| AT3G55660.1 | Thale cress | cytosol, plastid | 36.13 | 31.95 |
| AT1G01700.4 | Thale cress | nucleus | 31.64 | 31.46 |
| AT5G05940.1 | Thale cress | cytosol | 36.52 | 30.61 |
| AT1G31650.1 | Thale cress | mitochondrion, nucleus | 32.81 | 29.17 |
Protein Annotations
| Gene3D:1.20.58.2010 | MapMan:27.4.3.1 | EntrezGene:832076 | UniProt:A0A1P8BDV2 | ProteinID:ANM69739.1 | ProteinID:ANM69741.1 |
| ArrayExpress:AT5G19560 | EnsemblPlantsGene:AT5G19560 | RefSeq:AT5G19560 | TAIR:AT5G19560 | RefSeq:AT5G19560-TAIR-G | EnsemblPlants:AT5G19560.4 |
| Symbol:ATROPGEF10 | Unigene:At.54917 | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005089 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0065009 | InterPro:IPR005512 | RefSeq:NP_001331396.1 | RefSeq:NP_001331397.1 |
| PFAM:PF03759 | InterPro:PRONE_dom | PFscan:PS51334 | PANTHER:PTHR33101 | PANTHER:PTHR33101:SF10 | InterPro:RopGEF |
| UniParc:UPI0008496468 | SEG:seg | : | : | : | : |
Description
ATROPGEF10ROP uanine nucleotide exchange factor 10 [Source:TAIR;Acc:AT5G19560]
Coordinates
chr5:+:6602910..6606506
Molecular Weight (calculated)
58861.1 Da
IEP (calculated)
7.186
GRAVY (calculated)
-0.715
Length
512 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRTLGRKLS WPRSFSFRKM FDGRNSGHSS FSSRGDGMHT PEHELAGHAA PSTRRGKQNR RSDMEVMKER FAKLLLGEDM SGGGTGETSA LALSNAITKL
101: ADSMFGEQMK LQPMYPETKE NWRKEMGWLL SVIDHIVQFV PSRQMGKNGQ FTEIMVTKQR DDLLTNIPAL RKLDSVLLET LDNFKDQKDF WYVPRDMEDA
201: DHNGDWRRDE NWWLPVVKVP TDGLSEESRR WLQNQKDSVA QVLKAATAIN AHVLSEMHVP ENYIDSLPKN GKTSLGDFLY KSITEESFDP DYFVSFLDLS
301: TEHKVLDLKN RIEASMVIWK RKMCQKEKDG KSQWGSTVSL EKRELFEVRA ETILVMLKQQ FPGIPQSSLE VSKIKNNKDV GQAILESYSR VLESLASKIM
401: SRIEDVLEAD RLVQRQLMGE AETRSESEAE SEYEETEKVV AAETPNSRKL SDFIGWRLSS DTKKHSSMSD IEFFHKVEQE KEKPMMKSPR ALPKKFSYLA
501: KLENMRSPSD RH
101: ADSMFGEQMK LQPMYPETKE NWRKEMGWLL SVIDHIVQFV PSRQMGKNGQ FTEIMVTKQR DDLLTNIPAL RKLDSVLLET LDNFKDQKDF WYVPRDMEDA
201: DHNGDWRRDE NWWLPVVKVP TDGLSEESRR WLQNQKDSVA QVLKAATAIN AHVLSEMHVP ENYIDSLPKN GKTSLGDFLY KSITEESFDP DYFVSFLDLS
301: TEHKVLDLKN RIEASMVIWK RKMCQKEKDG KSQWGSTVSL EKRELFEVRA ETILVMLKQQ FPGIPQSSLE VSKIKNNKDV GQAILESYSR VLESLASKIM
401: SRIEDVLEAD RLVQRQLMGE AETRSESEAE SEYEETEKVV AAETPNSRKL SDFIGWRLSS DTKKHSSMSD IEFFHKVEQE KEKPMMKSPR ALPKKFSYLA
501: KLENMRSPSD RH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.