Factsheet for TraesCSU01G211800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G217800.1	Wheat	cytosol	100.0	95.88
TraesCSU01G211700.1	Wheat	cytosol	100.0	95.88
TraesCS6A01G196000.1	Wheat	cytosol	98.16	73.39
OQU84790	Sorghum	cytosol	88.96	65.91
TraesCS6D01G183300.1	Wheat	mitochondrion	98.77	63.26
HORVU6Hr1G050860.4	Barley	mitochondrion	97.55	63.22
Zm00001d053307_P002	Maize	cytosol, plastid	89.88	60.66
Os02t0272300-01	Rice	plasma membrane	92.64	58.87
Zm00001d016001_P002	Maize	mitochondrion	88.96	54.31
GSMUA_Achr6P14020_001	Banana	cytosol	62.27	47.1
CDY58963	Canola	cytosol	51.53	45.16
Solyc07g032730.2.1	Tomato	nucleus	54.29	43.28
KRH44350	Soybean	nucleus	57.06	40.97
Solyc06g066650.2.1	Tomato	nucleus	58.9	40.94
GSMUA_Achr3P03410_001	Banana	nucleus	62.88	40.51
PGSC0003DMT400042632	Potato	nucleus	57.06	39.74
PGSC0003DMT400006531	Potato	cytosol	57.98	37.65
Solyc03g120650.2.1	Tomato	cytosol	57.67	37.45
Solyc12g044270.1.1	Tomato	nucleus	59.82	37.14
KRH23439	Soybean	nucleus	60.74	37.08
PGSC0003DMT400040374	Potato	nucleus	53.37	37.02
KRH09881	Soybean	cytosol	59.82	36.59
CDY44926	Canola	nucleus	54.29	35.83
Bra020048.1-P	Field mustard	nucleus	54.29	35.83
CDY42277	Canola	nucleus	53.68	35.43
AT5G19560.4	Thale cress	mitochondrion	55.52	35.35
CDX88884	Canola	cytosol, plastid	52.76	35.25
Bra006510.1-P	Field mustard	cytosol	52.76	35.25
PGSC0003DMT400097197	Potato	nucleus	59.82	34.64
CDX70882	Canola	cytosol	53.07	34.26
KRH47282	Soybean	nucleus	56.44	34.2
CDX92519	Canola	plastid	51.53	33.8
KRH39304	Soybean	nucleus	53.68	33.65
PGSC0003DMT400001020	Potato	nucleus	56.75	33.33
KRH48369	Soybean	mitochondrion	57.36	33.27
Solyc12g007150.1.1	Tomato	nucleus	56.44	33.15
VIT_11s0016g03740.t01	Wine grape	nucleus	56.13	32.97
Bra002246.1-P	Field mustard	plastid	51.53	32.5

Protein Annotations

EnsemblPlants:TraesCSU01G211800.1	EnsemblPlantsGene:TraesCSU01G211800	Gene3D:1.20.58.2010	GO:GO:0003674	GO:GO:0005089	GO:GO:0005488
GO:GO:0005515	InterPro:IPR005512	InterPro:PRONE_dom	InterPro:RopGEF	PANTHER:PTHR33101	PANTHER:PTHR33101:SF16
PFAM:PF03759	PFscan:PS51334	SEG:seg	MapMan:27.4.3.1	:	:

Description

No Description!

Coordinates

chrUn:+:314078139..314079546

Molecular Weight (calculated)

37199.2 Da

IEP (calculated)

4.867

GRAVY (calculated)

-0.539

Length

326 amino acids

Sequence
(BLAST)

001: MQGYMDNFVD QTEFWYEKGG DNKRDDDKWW MPTVKVPAEG LSDVTRKWLQ YQKECVNQVL KAAMAINAQV LVEMEIPEIY IESLPKKGKT SLGDAIYRSI
101: TDEEFDPIEF LEGVDLSTEH KVLDLKNRIE ASTIIWKRKM QTKDAKSSWG SIISFEKREQ FEERAETILH LLKLQFPGAP QSQLDISKIQ YNRDVGYALL
201: ESYSRVLESL AYSVISRIED VLGADAAATN LTASEAARRQ LEMKAPRKLD AREELEKLNE APASMTLYDF MGWHFDQDEL MRKKEEGTLD EAGEAMLLKK
301: APSLAPKKFS YVDSLAGGVR SPSAHH

Best Arabidopsis Sequence Match ( AT1G52240.1 )
(BLAST)

001: MVKAMEQEQE TYKSRLFHFK NMNENSASRH VKSWSSDCAM RMDGSDNLDD DDNDMMMFRS QPGKCGSVDR PSLPIGGVTP NRNDKLPRVS SSDSMEALII
101: LQAAMEQMKE KFSKLLLGED MSGGGKGVSS ALALSNAITN LAASAFGEQR RLEPMAVDRK TRWRREIGWL ISVADYIVEF APTQQTNKDG TSMEVMSTRQ
201: RTDLLCNIPA LKKLDAMLLD CLDKFKDQDE FYYVKKDSPD SCETRNDEKW WLPAVKVPPN GLSEISRRFL QSQKECVNQV LKAAMAINAQ VLSEMEIPES
301: YLESLPKNGR ASLGDVIYRM ITVEMFDADQ FLIEMDLSSE HKILDLKNRI EASIVIWKRK MVQKDTKSPW GSTVSIEKRE QFEERAETIL LLLKQGFPGI
401: SQSSLDISKI QFNRDVGLAI LESYSRVLES LAHTVMSRIE DVLYADQLTQ EPTNNAPSKN RYSLKENEKL REERLSFTED MASGTLSDVM QWGNKNNEMK
501: KESFFGDREK PLLSKVTGIM TNNKKSSYLD NLGAMRSPTA RYS

Arabidopsis Description

ROPGEF11ROPGEF11 [Source:UniProtKB/TrEMBL;Acc:A0A178W8V0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.