CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58963	Canola	cytosol	73.24	97.85
Bra002246.1-P	Field mustard	plastid	100.0	96.13
CDY44926	Canola	nucleus	86.32	86.84
CDY42277	Canola	nucleus	85.92	86.44
AT5G19560.4	Thale cress	mitochondrion	85.31	82.81
CDX88884	Canola	cytosol, plastid	75.25	76.64
CDX70882	Canola	cytosol	75.86	74.65
GSMUA_Achr2P09130_001	Banana	cytosol	46.08	58.57
GSMUA_Achr6P14020_001	Banana	cytosol	50.7	58.47
GSMUA_Achr5P06900_001	Banana	cytosol	48.89	57.72
GSMUA_Achr4P10530_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	49.7	57.31
TraesCS6A01G196000.1	Wheat	cytosol	49.5	56.42
OQU84790	Sorghum	cytosol	49.5	55.91
CDY03296	Canola	nucleus	36.02	54.08
Zm00001d053307_P002	Maize	cytosol, plastid	50.5	51.97
TraesCSU01G211800.1	Wheat	cytosol	33.8	51.53
GSMUA_Achr3P03410_001	Banana	nucleus	52.31	51.38
CDY03297	Canola	mitochondrion	53.92	51.24
CDY39783	Canola	mitochondrion	53.92	51.05
CDX77402	Canola	nucleus	52.92	50.48
TraesCSU01G217800.1	Wheat	cytosol	34.41	50.29
TraesCSU01G211700.1	Wheat	cytosol	34.41	50.29
CDY46477	Canola	nucleus	52.72	50.29
CDX67930	Canola	nucleus	49.09	50.1
Os02t0272300-01	Rice	plasma membrane	51.71	50.1
GSMUA_Achr3P15410_001	Banana	nucleus	49.7	49.8
TraesCS6D01G183300.1	Wheat	mitochondrion	50.91	49.71
HORVU6Hr1G050860.4	Barley	mitochondrion	50.3	49.7
VIT_11s0016g03740.t01	Wine grape	nucleus	54.12	48.47
Zm00001d016001_P002	Maize	mitochondrion	50.91	47.38
CDY45633	Canola	nucleus	48.29	45.89
CDY69871	Canola	cytosol	10.26	45.54
CDX79407	Canola	cytosol, endoplasmic reticulum, nucleus	48.89	45.25
CDX87879	Canola	nucleus	48.29	43.09
CDX97723	Canola	nucleus	45.27	42.29
CDY30136	Canola	nucleus	45.07	40.73
CDY67259	Canola	nucleus	49.09	40.6
CDY52982	Canola	nucleus	49.09	40.6
CDY57376	Canola	cytosol, extracellular, nucleus	6.04	40.0
CDY28381	Canola	nucleus	45.27	37.56
CDX93028	Canola	nucleus	35.61	37.34
CDY20181	Canola	nucleus	45.07	36.9
CDY18892	Canola	nucleus	33.4	36.73
CDX74772	Canola	nucleus, plastid	33.2	36.67
CDX77457	Canola	cytosol	38.03	34.55
CDY70620	Canola	nucleus	32.6	34.54
CDY51157	Canola	nucleus	31.59	34.51
CDY07216	Canola	cytosol	32.8	34.32
CDX85176	Canola	cytosol	37.63	34.19
CDY12411	Canola	cytosol	8.85	34.11
CDX84189	Canola	cytosol	33.6	34.01
CDY31706	Canola	cytosol	34.41	34.0
CDY41197	Canola	cytosol, plastid	36.62	32.85
CDY40246	Canola	cytosol, plastid	36.42	32.5
CDY40325	Canola	nucleus	35.81	31.79
CDY10476	Canola	nucleus	35.81	31.79
CDY62299	Canola	cytosol, nucleus, plastid	33.2	29.46
CDY12303	Canola	nucleus	33.2	29.31
CDX70109	Canola	cytosol	36.62	28.75
CDX98888	Canola	cytosol	36.22	28.21
CDX91908	Canola	cytosol	32.6	24.73

Protein Annotations

EnsemblPlants:CDX92519	EnsemblPlantsGene:GSBRNA2T00154298001	Gene3D:1.20.58.2010	GO:A0A078DVT7	GO:GO:0003674	GO:GO:0005089
GO:GO:0005488	GO:GO:0005515	InterPro:IPR005512	InterPro:PRONE_dom	InterPro:RopGEF	PANTHER:PTHR33101
PANTHER:PTHR33101:SF10	PFAM:PF03759	PFscan:PS51334	ProteinID:CDX92519	ProteinID:CDX92519.1	SEG:seg
UniParc:UPI0004EE9884	MapMan:27.4.3.1	:	:	:	:

Description

BnaA10g15580D

Coordinates

chrLK031872:-:1043366..1046180

Molecular Weight (calculated)

56827.9 Da

IEP (calculated)

6.607

GRAVY (calculated)

-0.628

Length

497 amino acids

Sequence
(BLAST)

001: MFDGRNSGHS SFSSRGDGRH TPEHELAVHA IPSAQRTRRG RQNRTSDMEA MKARFAKLLL GEDMSGGSEG VTSALALSYA ITNLADSVFG EQMKLQPMYP
101: ETKKIWRKEM NLLLSVVDHI VQFVPSKQMG KNGAFTEIMV TKQRDDLLMN IPALRKLDSV LLETLDNFKD QKDFWYVPRD VEDTSNNGDW RRDENWWLPV
201: VKVPSDGLSE ESRKLLQSQK DSVAQVLKAA TAINDVVLSE MNIPDNYIDS LPKNGKTILG DFLYKILTDE HFDPDYFLSF LDLSTEHKVL DLKNRIEASM
301: VIWKRKMNQK EKDGRSQWGS SVSLERRELL EVRAETVLVM LKHQYPGIPQ SSLEVSKIKN NKDIGQAILE SYSRVLENLA SKIMSRIEDV LEADALVQRQ
401: LMAEAERRSA ESEVESEYEE TEKMESAETP NSRKLSELIG WRLSSDTKKH CSMSDIELFH KAEQEKTKPM MKSPRALPKK LSFLAKLENM RSPTERH

Best Arabidopsis Sequence Match ( AT5G19560.5 )
(BLAST)

001: MFDGRNSGHS SFSSRGDGMH TPEHELAGHA APSTRRGKQN RRSDMEVMKE RFAKLLLGED MSGGGTGETS ALALSNAITK LADSMFGEQM KLQPMYPETK
101: ENWRKEMGWL LSVIDHIVQF VPSRQMGKNG QFTEIMVTKQ RDDLLTNIPA LRKLDSVLLE TLDNFKDQKD FWYVPRDMED ADHNGDWRRD ENWWLPVVKV
201: PTDGLSEESR RWLQNQKDSV AQVLKAATAI NAHVLSEMHV PENYIDSLPK NGKTSLGDFL YKSITEESFD PDYFVSFLDL STEHKVLDLK NRIEASMVIW
301: KRKMCQKEKD GKSQWGSTVS LEKRELFEVR AETILVMLKQ QFPGIPQSSL EVSKIKNNKD VGQAILESYS RVLESLASKI MSRIEDVLEA DRLVQRQLMG
401: EAETRSESEA ESEYEETEKV VAAETPNSRK LSDFIGWRLS SDTKKHSSMS DIEFFHKVEQ EKEKPMMKSP RALPKKFSYL AKLENMRSPS DRH

Arabidopsis Description

ATROPGEF10ROP uanine nucleotide exchange factor 10 [Source:TAIR;Acc:AT5G19560]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.