Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41197 | Canola | cytosol, plastid | 97.49 | 98.01 |
| Bra007183.1-P | Field mustard | cytosol, plastid | 100.0 | 97.55 |
| AT3G55660.1 | Thale cress | cytosol, plastid | 89.95 | 86.53 |
| GSMUA_Achr9P03750_001 | Banana | cytosol | 46.68 | 55.79 |
| PGSC0003DMT400067654 | Potato | nucleus | 51.53 | 53.95 |
| Solyc08g006550.2.1 | Tomato | nucleus | 50.99 | 53.58 |
| CDY57376 | Canola | cytosol, extracellular, nucleus | 7.0 | 52.0 |
| VIT_13s0019g02710.t01 | Wine grape | nucleus | 53.86 | 50.34 |
| KRH73109 | Soybean | nucleus | 50.27 | 50.27 |
| EES03886 | Sorghum | cytosol | 48.65 | 49.72 |
| Os01t0849100-01 | Rice | cytosol | 48.47 | 49.45 |
| KRG97804 | Soybean | nucleus | 52.42 | 49.24 |
| KRH31060 | Soybean | nucleus | 52.6 | 49.0 |
| TraesCS3B01G396500.1 | Wheat | cytosol | 47.4 | 48.98 |
| TraesCS3D01G357800.1 | Wheat | cytosol | 47.04 | 48.7 |
| TraesCS3A01G364400.1 | Wheat | nucleus | 47.22 | 48.61 |
| CDY69871 | Canola | cytosol | 9.69 | 48.21 |
| CDY10476 | Canola | nucleus | 48.29 | 48.04 |
| KRH15022 | Soybean | nucleus | 48.29 | 47.95 |
| CDY40325 | Canola | nucleus | 48.11 | 47.86 |
| TraesCS1D01G280000.1 | Wheat | cytosol | 47.04 | 46.87 |
| Zm00001d042861_P001 | Maize | cytosol | 48.11 | 46.77 |
| Os05t0454200-01 | Rice | nucleus | 47.22 | 46.3 |
| TraesCS1B01G289900.1 | Wheat | cytosol | 47.04 | 46.29 |
| HORVU1Hr1G072910.3 | Barley | cytosol | 46.5 | 45.92 |
| EES18335 | Sorghum | cytosol | 47.4 | 45.05 |
| Zm00001d010062_P001 | Maize | peroxisome | 46.5 | 44.89 |
| CDX70109 | Canola | cytosol | 50.99 | 44.87 |
| CDX98888 | Canola | cytosol | 50.99 | 44.51 |
| CDY07216 | Canola | cytosol | 37.7 | 44.21 |
| CDY70620 | Canola | nucleus | 37.16 | 44.14 |
| TraesCS1A01G280900.2 | Wheat | cytosol | 46.5 | 43.97 |
| CDY51157 | Canola | nucleus | 35.73 | 43.74 |
| CDY18892 | Canola | nucleus | 34.29 | 42.26 |
| CDX74772 | Canola | nucleus, plastid | 34.11 | 42.22 |
| CDX77457 | Canola | cytosol | 41.29 | 42.05 |
| CDX85176 | Canola | cytosol | 41.11 | 41.86 |
| HORVU3Hr1G085680.2 | Barley | plastid | 47.4 | 40.43 |
| CDX67930 | Canola | nucleus | 33.75 | 38.6 |
| CDY03296 | Canola | nucleus | 22.8 | 38.37 |
| CDY03297 | Canola | mitochondrion | 35.91 | 38.24 |
| CDY44926 | Canola | nucleus | 33.75 | 38.06 |
| CDY39783 | Canola | mitochondrion | 35.73 | 37.9 |
| CDY42277 | Canola | nucleus | 33.39 | 37.65 |
| CDY46477 | Canola | nucleus | 35.01 | 37.43 |
| CDX77402 | Canola | nucleus | 35.01 | 37.43 |
| CDY45633 | Canola | nucleus | 34.47 | 36.71 |
| CDX92519 | Canola | plastid | 32.5 | 36.42 |
| CDX88884 | Canola | cytosol, plastid | 31.6 | 36.07 |
| CDY58963 | Canola | cytosol | 23.7 | 35.48 |
| CDX79407 | Canola | cytosol, endoplasmic reticulum, nucleus | 33.93 | 35.2 |
| CDX70882 | Canola | cytosol | 31.78 | 35.05 |
| CDX87879 | Canola | nucleus | 34.47 | 34.47 |
| CDX97723 | Canola | nucleus | 32.85 | 34.4 |
| CDY12411 | Canola | cytosol | 7.9 | 34.11 |
| CDY30136 | Canola | nucleus | 33.21 | 33.64 |
| Zm00001d047899_P001 | Maize | cytosol | 16.52 | 33.09 |
| CDX84189 | Canola | cytosol | 29.08 | 32.99 |
| CDX91908 | Canola | cytosol | 37.52 | 31.91 |
| CDY67259 | Canola | nucleus | 34.29 | 31.78 |
| CDY52982 | Canola | nucleus | 34.11 | 31.61 |
| CDY31706 | Canola | cytosol | 28.55 | 31.61 |
| CDY28381 | Canola | nucleus | 33.57 | 31.22 |
| CDY20181 | Canola | nucleus | 33.57 | 30.81 |
| Zm00001d023356_P001 | Maize | cytosol | 19.39 | 30.42 |
| Zm00001d037119_P001 | Maize | plastid | 22.44 | 29.0 |
| CDY62299 | Canola | cytosol, nucleus, plastid | 28.73 | 28.57 |
| CDY12303 | Canola | nucleus | 28.73 | 28.42 |
| Zm00001d049679_P001 | Maize | plastid | 22.08 | 27.83 |
| CDX93028 | Canola | nucleus | 22.62 | 26.58 |
| GSMUA_Achr6P14950_001 | Banana | mitochondrion | 45.78 | 19.2 |
Protein Annotations
| Gene3D:1.20.58.1310 | Gene3D:1.20.58.2010 | MapMan:27.4.3.1 | GO:A0A078HRB7 | UniProt:A0A078HRB7 | EnsemblPlants:CDY40246 |
| ProteinID:CDY40246 | ProteinID:CDY40246.1 | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005089 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0065009 | EnsemblPlantsGene:GSBRNA2T00069399001 | InterPro:IPR005512 | PFAM:PF03759 |
| InterPro:PRONE_dom | PFscan:PS51334 | PANTHER:PTHR33101 | PANTHER:PTHR33101:SF1 | InterPro:RopGEF | UniParc:UPI0004EF4627 |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g35280DBnaA09g35280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRB7]
Coordinates
chrLK032466:-:300647..303500
Molecular Weight (calculated)
61874.7 Da
IEP (calculated)
8.723
GRAVY (calculated)
-0.406
Length
557 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSCIGSEG SKRYGESKRI VADSVTESTT DSSLSSSSCG AGSSSGRSVS SLSSPPTKSQ LLGWPLGQSS WRKSSGKKMT KKTPTKVDTF GFKRIGTETS
101: EVELLKERMA KLLLGEDMSG SGEGVCPALA ISNAITNLYA AILGQQWRLE PLPSEKKTMW RREIEVLLSV SDHIVELVPS FQNIPNGSKI EVMNCRPRSD
201: LSTCLPALRK LDNMLIEILD SFEGTEFWYV DQGVVASESA RSNSFREDGD KWWLPLPRVP SDGLSEQTRK KLDHTRDFTN QILKACMSIN SIALADMEVP
301: QAYLEALPKN GRSCLGDFLY RNITSDNFSA DYLLESIDLS SEHAVVEMAN RVEASMYIWR RRGHSRHLIS LYRSTGAKPT WGMIVREMMM NQNDGDKRQI
401: FAGRAESLLI SLKQRFPGLR QTALDTSKIQ FNKDVGKSIL ESYSRVLESL AYSIGVRIEE VLYMDDISKE DHDDSCSDKL RLLKRLSAPS LFSVSFSGTS
501: TPYRTPSFSA STPTYSPMPL ISPISGGGER APFLSRRNIR ERCGFGPKKA LANYLRG
101: EVELLKERMA KLLLGEDMSG SGEGVCPALA ISNAITNLYA AILGQQWRLE PLPSEKKTMW RREIEVLLSV SDHIVELVPS FQNIPNGSKI EVMNCRPRSD
201: LSTCLPALRK LDNMLIEILD SFEGTEFWYV DQGVVASESA RSNSFREDGD KWWLPLPRVP SDGLSEQTRK KLDHTRDFTN QILKACMSIN SIALADMEVP
301: QAYLEALPKN GRSCLGDFLY RNITSDNFSA DYLLESIDLS SEHAVVEMAN RVEASMYIWR RRGHSRHLIS LYRSTGAKPT WGMIVREMMM NQNDGDKRQI
401: FAGRAESLLI SLKQRFPGLR QTALDTSKIQ FNKDVGKSIL ESYSRVLESL AYSIGVRIEE VLYMDDISKE DHDDSCSDKL RLLKRLSAPS LFSVSFSGTS
501: TPYRTPSFSA STPTYSPMPL ISPISGGGER APFLSRRNIR ERCGFGPKKA LANYLRG
001: MEDNSCIGFE GSKRFGETSK RIIGLIDSVT ESTTDSSLSS SSSGVGSSSG RSSVAERSVS SPPTKSQILG WPLGQGSWRK SSGKMKKKTP TKIDDFGFKR
101: VGTETSEIEL LKERMAKLLL GEDMSGSGEG VCPALAISNA ITNLYAAILG QQWRLEPIPS EKKLMWRREI EVLLSVSDHI VELVPSFQNF PNGNKIEVMN
201: CRPRSDLFTC LPALRKLDNM LIEILDSFGE TEFWYVDQGI VAAESARSNS FREDGDKWWL PLPRVPSDGL TEQTRKKLDH TREFTNQILK ACMSINSIAL
301: AEMEVPQSYL EALPKNGRSC LGDFLYRNIT SDNFSADHLL ESIDLSSELA VVEMANRVEA SMYVWRRRAH SRHLISLYRS TSTRWGMIVK EMMMHQTDGD
401: KREIFAERAE SLLIRLKQRF PGLRQTALDT SKIQYNKDVG KSILESYSRV LESLAYSIGV RIEEVLFMDD ISKDDGDGDD DSCSDKLRLL SKEAASGGSG
501: SLREKLSAPS LFSVSFSGTS TPYRTLSFSA STPSYSPMPL ISPINGGRGG ERAPFLSGRN IRERCGFGPK KALANYLRG
101: VGTETSEIEL LKERMAKLLL GEDMSGSGEG VCPALAISNA ITNLYAAILG QQWRLEPIPS EKKLMWRREI EVLLSVSDHI VELVPSFQNF PNGNKIEVMN
201: CRPRSDLFTC LPALRKLDNM LIEILDSFGE TEFWYVDQGI VAAESARSNS FREDGDKWWL PLPRVPSDGL TEQTRKKLDH TREFTNQILK ACMSINSIAL
301: AEMEVPQSYL EALPKNGRSC LGDFLYRNIT SDNFSADHLL ESIDLSSELA VVEMANRVEA SMYVWRRRAH SRHLISLYRS TSTRWGMIVK EMMMHQTDGD
401: KREIFAERAE SLLIRLKQRF PGLRQTALDT SKIQYNKDVG KSILESYSRV LESLAYSIGV RIEEVLFMDD ISKDDGDGDD DSCSDKLRLL SKEAASGGSG
501: SLREKLSAPS LFSVSFSGTS TPYRTLSFSA STPSYSPMPL ISPINGGRGG ERAPFLSGRN IRERCGFGPK KALANYLRG
Arabidopsis Description
ROPGEF6Rop guanine nucleotide exchange factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M056]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.