Factsheet for Zm00001d023356_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047899_P001	Maize	cytosol	31.27	39.93
Zm00001d037119_P001	Maize	plastid	41.13	33.87
Zm00001d049679_P001	Maize	plastid	40.85	32.81
EES03886	Sorghum	cytosol	42.25	27.52
Zm00001d042861_P001	Maize	cytosol	42.54	26.35
TraesCS3A01G364400.1	Wheat	nucleus	39.15	25.69
TraesCS3D01G357800.1	Wheat	cytosol	38.87	25.65
TraesCS3B01G396500.1	Wheat	cytosol	38.87	25.6
Os01t0849100-01	Rice	cytosol	39.15	25.46
GSMUA_Achr9P03750_001	Banana	cytosol	33.24	25.32
Zm00001d006269_P001	Maize	cytosol	25.07	23.18
PGSC0003DMT400067654	Potato	nucleus	34.08	22.74
Solyc08g006550.2.1	Tomato	nucleus	33.8	22.64
Solyc09g011480.2.1	Tomato	nucleus	36.06	21.77
AT5G02010.1	Thale cress	nucleus	33.24	21.61
Zm00001d010062_P001	Maize	peroxisome	34.93	21.49
VIT_13s0019g02710.t01	Wine grape	nucleus	36.06	21.48
Zm00001d002696_P001	Maize	cytosol	27.61	21.21
VIT_08s0007g01380.t01	Wine grape	nucleus	36.34	21.18
Bra009621.1-P	Field mustard	nucleus	33.24	21.07
CDY10476	Canola	nucleus	33.24	21.07
HORVU3Hr1G085680.2	Barley	plastid	38.31	20.83
CDY40325	Canola	nucleus	32.68	20.71
KRH73109	Soybean	nucleus	32.39	20.65
Zm00001d012691_P001	Maize	cytosol, extracellular, mitochondrion, plastid	16.62	20.56
Zm00001d021489_P001	Maize	nucleus, plastid	26.48	20.26
KRH00070	Soybean	nucleus	34.08	19.74
KRG97804	Soybean	nucleus	32.96	19.73
VIT_08s0007g01390.t01	Wine grape	nucleus	32.96	19.66
KRH31060	Soybean	nucleus	32.96	19.57
KRH65969	Soybean	nucleus	33.24	19.54
KRH75747	Soybean	nucleus	32.11	19.49
PGSC0003DMT400005554	Potato	cytosol, plastid	36.06	19.42
CDY40246	Canola	cytosol, plastid	30.42	19.39
CDY41197	Canola	cytosol, plastid	30.14	19.31
AT3G55660.1	Thale cress	cytosol, plastid	31.27	19.17
Bra009152.1-P	Field mustard	cytosol, plastid	31.83	18.99
Bra007183.1-P	Field mustard	cytosol, plastid	30.42	18.91
Solyc10g086660.1.1	Tomato	nucleus	35.21	18.41
Zm00001d029850_P001	Maize	nucleus, plastid	25.35	18.4
KRH15022	Soybean	nucleus	29.01	18.36
PGSC0003DMT400049230	Potato	nucleus	35.77	18.35
Zm00001d021464_P002	Maize	nucleus, plastid	29.58	18.2
CDX98888	Canola	cytosol	32.39	18.03
CDX70109	Canola	cytosol	32.11	18.01
AT5G05940.1	Thale cress	cytosol	30.7	17.84
KRH49210	Soybean	nucleus, plastid	34.37	17.06
Zm00001d053307_P002	Maize	cytosol, plastid	23.1	16.98
Zm00001d009549_P002	Maize	mitochondrion	25.63	16.49
Zm00001d038989_P002	Maize	nucleus, plastid	23.66	16.47
Zm00001d043383_P001	Maize	nucleus	23.94	16.25
Zm00001d016001_P002	Maize	mitochondrion	23.94	15.92
Zm00001d017755_P002	Maize	cytosol	22.54	14.79
Zm00001d043889_P001	Maize	mitochondrion	25.07	14.71
Zm00001d051553_P004	Maize	cytosol	21.97	14.44
GSMUA_Achr6P14950_001	Banana	mitochondrion	31.55	8.43

Protein Annotations

Gene3D:1.20.58.1310	MapMan:27.4.3.1	Gene3D:3.40.50.1820	UniProt:A0A1D6ISZ6	InterPro:AB_hydrolase	ProteinID:AQK39195.1
GO:GO:0003674	GO:GO:0005085	GO:GO:0005089	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0065009	InterPro:IPR005512	InterPro:IPR029058	PFAM:PF03759	InterPro:PRONE_dom	PFscan:PS51334
PANTHER:PTHR33101	PANTHER:PTHR33101:SF1	InterPro:RopGEF	SUPFAM:SSF53474	UniParc:UPI000842407D	EnsemblPlantsGene:Zm00001d023356
EnsemblPlants:Zm00001d023356_P001	EnsemblPlants:Zm00001d023356_T001	SEG:seg	:	:	:

Description

Rop guanine nucleotide exchange factor 7

Coordinates

chr10:-:4054205..4057138

Molecular Weight (calculated)

39714.6 Da

IEP (calculated)

9.039

GRAVY (calculated)

-0.508

Length

355 amino acids

Sequence
(BLAST)

001: MFWFDIYKNI DKIGLVNCPV LVIHGTSDDV VDCSHGKQLW EHCKLYPDYI KHLKKFVSSV SKKTSSKPDP KETTSKDDTT SKETEEAYPE KPQEAKKCPQ
101: ISRKSLDSRF GKSKTVDVPD KPRMSSDDID KFRRSRCLAG NSNTIVALAG NKADLLDKGG ILFLMPLQLL KSWKASETQN SGMLSKVSLH QTAMALPPSG
201: WLSTAVMRSG GSRCLHNKTR KQLQHKRDCA NQILKAAMAI NSNTLAEMEV AEPYLDSLPK NGRSTLGDII YRYITSDQFS PECLLDCLDL STEYQALEVA
301: NRVEASVYVW RRRVAAKPVN GLGRSSSARS SWGMVKDMMV DSEKRELLLA EQADL

Best Arabidopsis Sequence Match ( AT5G02010.1 )
(BLAST)

001: MDGSSENLPE VEEKGRESSC CSSETTRQEE EEQSPSCTED FTASPVSSRW SVKNIDGEKK KIRSDSRVSE VEMMKERFSK LLLGEDMSGS GNGVCTALAI
101: SNAITNLCAT LFGQLWRLEP LPTEKKEMWR REMEWLLCVS DHIVEMTPTW QTFPDGTKLE IMTCRPRSDL YVNLPALRKL DNMLLEILDS FEETEFWYVD
201: QGIMAHESAA DGSSSFRKSF QRQEDKWWLP VPRVSPGGLQ ENSRKQLQHK RDCTNQILKA AMAINSITLA DMEIPESYLE SLPRKGRSCL GDLIYRYISS
301: DQFSPECLLD CLDLSSEHQA IEIANRVESS IYLWHKRTNS KPATNTKTSW EMVKELMVDA DKLELMADRA ESLLLSLKQR FPGLPQTALD MSKIQYNKDI
401: GKSILESYSR VLESLAFNIV ARIDDLLFVD DLTRHSSDQI PTTLGNNGND APKSIAVPVS NYTTPSYSPS KQELRSSITV PPSPSRFKIP HSSSVKRVLT
501: AYVTKNEPRL KNLPLERSSR SSSSERLSLE KCMKESLNVS NLDPGI

Arabidopsis Description

ROPGEF7Rop guanine nucleotide exchange factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZN0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.