Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009621.1-P | Field mustard | nucleus | 98.57 | 98.57 |
| CDY10476 | Canola | nucleus | 97.68 | 97.68 |
| AT5G02010.1 | Thale cress | nucleus | 88.93 | 91.21 |
| CDY57376 | Canola | cytosol, extracellular, nucleus | 9.64 | 72.0 |
| GSMUA_Achr9P03750_001 | Banana | cytosol | 53.39 | 64.16 |
| VIT_08s0007g01380.t01 | Wine grape | nucleus | 63.21 | 58.13 |
| Solyc09g011480.2.1 | Tomato | nucleus | 59.82 | 56.97 |
| KRH00070 | Soybean | nucleus | 61.61 | 56.28 |
| EES03886 | Sorghum | cytosol | 54.11 | 55.6 |
| TraesCS3D01G357800.1 | Wheat | cytosol | 53.21 | 55.39 |
| Os01t0849100-01 | Rice | cytosol | 53.93 | 55.31 |
| TraesCS3B01G396500.1 | Wheat | cytosol | 53.21 | 55.29 |
| TraesCS3A01G364400.1 | Wheat | nucleus | 53.39 | 55.27 |
| TraesCS1D01G280000.1 | Wheat | cytosol | 53.93 | 54.02 |
| HORVU1Hr1G072910.3 | Barley | cytosol | 54.29 | 53.9 |
| TraesCS1B01G289900.1 | Wheat | cytosol | 54.11 | 53.53 |
| Os05t0454200-01 | Rice | nucleus | 53.75 | 52.99 |
| Zm00001d042861_P001 | Maize | cytosol | 53.93 | 52.71 |
| KRH65969 | Soybean | nucleus | 56.61 | 52.48 |
| KRH75747 | Soybean | nucleus | 54.82 | 52.48 |
| EES18335 | Sorghum | cytosol | 54.64 | 52.22 |
| Zm00001d010062_P001 | Maize | peroxisome | 52.86 | 51.3 |
| Solyc10g086660.1.1 | Tomato | nucleus | 62.14 | 51.25 |
| PGSC0003DMT400049230 | Potato | nucleus | 62.86 | 50.87 |
| PGSC0003DMT400005554 | Potato | cytosol, plastid | 59.82 | 50.83 |
| TraesCS1A01G280900.2 | Wheat | cytosol | 53.04 | 50.42 |
| CDY70620 | Canola | nucleus | 40.71 | 48.61 |
| CDY07216 | Canola | cytosol | 41.07 | 48.42 |
| CDY40246 | Canola | cytosol, plastid | 47.86 | 48.11 |
| KRH49210 | Soybean | nucleus, plastid | 61.43 | 48.11 |
| CDY41197 | Canola | cytosol, plastid | 47.5 | 48.01 |
| CDY51157 | Canola | nucleus | 38.93 | 47.91 |
| CDX70109 | Canola | cytosol | 53.21 | 47.08 |
| CDX85176 | Canola | cytosol | 45.89 | 46.98 |
| CDX77457 | Canola | cytosol | 45.71 | 46.8 |
| CDX98888 | Canola | cytosol | 53.04 | 46.55 |
| CDY69871 | Canola | cytosol | 9.29 | 46.43 |
| HORVU3Hr1G085680.2 | Barley | plastid | 53.75 | 46.09 |
| CDX74772 | Canola | nucleus, plastid | 36.96 | 46.0 |
| VIT_08s0007g01390.t01 | Wine grape | nucleus | 48.57 | 45.71 |
| CDY18892 | Canola | nucleus | 36.79 | 45.58 |
| CDY45633 | Canola | nucleus | 37.14 | 39.77 |
| CDX67930 | Canola | nucleus | 34.29 | 39.43 |
| CDX97723 | Canola | nucleus | 35.89 | 37.78 |
| CDY03296 | Canola | nucleus | 22.14 | 37.46 |
| CDX87879 | Canola | nucleus | 37.14 | 37.34 |
| CDY03297 | Canola | mitochondrion | 34.82 | 37.28 |
| CDY44926 | Canola | nucleus | 32.68 | 37.04 |
| CDY39783 | Canola | mitochondrion | 34.64 | 36.95 |
| CDY30136 | Canola | nucleus | 36.25 | 36.91 |
| CDY46477 | Canola | nucleus | 34.29 | 36.85 |
| CDX79407 | Canola | cytosol, endoplasmic reticulum, nucleus | 35.18 | 36.69 |
| CDY42277 | Canola | nucleus | 32.32 | 36.64 |
| CDX88884 | Canola | cytosol, plastid | 31.79 | 36.48 |
| CDX77402 | Canola | nucleus | 33.93 | 36.47 |
| CDY58963 | Canola | cytosol | 23.93 | 36.02 |
| CDX92519 | Canola | plastid | 31.79 | 35.81 |
| CDX70882 | Canola | cytosol | 31.96 | 35.45 |
| CDX91908 | Canola | cytosol | 41.43 | 35.42 |
| Zm00001d047899_P001 | Maize | cytosol | 17.14 | 34.53 |
| CDY67259 | Canola | nucleus | 36.43 | 33.94 |
| CDY52982 | Canola | nucleus | 36.25 | 33.78 |
| CDY28381 | Canola | nucleus | 35.71 | 33.39 |
| CDX84189 | Canola | cytosol | 29.11 | 33.2 |
| CDY20181 | Canola | nucleus | 35.89 | 33.11 |
| Zm00001d023356_P001 | Maize | cytosol | 20.71 | 32.68 |
| CDY31706 | Canola | cytosol | 28.57 | 31.81 |
| CDY12411 | Canola | cytosol | 7.32 | 31.78 |
| Zm00001d037119_P001 | Maize | plastid | 23.21 | 30.16 |
| Zm00001d049679_P001 | Maize | plastid | 23.39 | 29.64 |
| CDY62299 | Canola | cytosol, nucleus, plastid | 29.46 | 29.46 |
| CDY12303 | Canola | nucleus | 29.46 | 29.31 |
| CDX93028 | Canola | nucleus | 22.32 | 26.37 |
| GSMUA_Achr6P14950_001 | Banana | mitochondrion | 53.75 | 22.67 |
Protein Annotations
| Gene3D:1.20.58.2010 | MapMan:27.4.3.1 | GO:A0A078HP32 | UniProt:A0A078HP32 | EnsemblPlants:CDY40325 | ProteinID:CDY40325 |
| ProteinID:CDY40325.1 | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005089 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0065009 | EnsemblPlantsGene:GSBRNA2T00069507001 | InterPro:IPR005512 | PFAM:PF03759 | InterPro:PRONE_dom |
| PFscan:PS51334 | PANTHER:PTHR33101 | PANTHER:PTHR33101:SF14 | InterPro:RopGEF | UniParc:UPI0004EE17E7 | SEG:seg |
Description
BnaA10g27430DBnaA10g27430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HP32]
Coordinates
chrLK032468:+:124942..127603
Molecular Weight (calculated)
63435.2 Da
IEP (calculated)
5.385
GRAVY (calculated)
-0.551
Length
560 amino acids
Sequence
(BLAST)
(BLAST)
001: MGASPEKLRI DMREAEEKRR ESSCCSSSDF PISETIRREE EEEQSPSTTE DFTASPLSSR WSVKNVDEGG DKKIRPKQSR VSEIEMMKER FSKLLLGEDM
101: SGSGNGVCTA LAISNAITNL CATLFGQLWR LEPLPKEKKD MWRREMEWLL CVSDHIVEMT PTWQTFPDGT KLEIMTCRPR SDLYVNLPAL RKLDNMLLEI
201: LDSFEETEFW YVDQGIVAHE SAADGSSSFR KSFQRQEDKW WLPVPRVSPG GLQENSRKQL QHRRDCTNQI LKAAMAINSI TLADMDIPES YLESLPRRGR
301: SCLGDLIYRY ISSDQFSPEY LLDCLDLSSE HQAIEIANRV ESSIYFWHKR SNSKPATNTK TSWEMVKELM VDGEKLELMA DRAESLLLSL KQRFPGLPQT
401: ALDMSKIQYN KDIGKSILES YSRVLESLAF NIVARIDDLL FVDDLTRHSS DQIPTTLGNN GSDAVKNNAL SATTYTTPSY SPAKAELGTS VTTVPPSPSR
501: FKIPHSSSVK RVLTAYVTKN EPRLKDIQVE RSSRSSSSER LSLEKCMKES LNVSNLDPGI
101: SGSGNGVCTA LAISNAITNL CATLFGQLWR LEPLPKEKKD MWRREMEWLL CVSDHIVEMT PTWQTFPDGT KLEIMTCRPR SDLYVNLPAL RKLDNMLLEI
201: LDSFEETEFW YVDQGIVAHE SAADGSSSFR KSFQRQEDKW WLPVPRVSPG GLQENSRKQL QHRRDCTNQI LKAAMAINSI TLADMDIPES YLESLPRRGR
301: SCLGDLIYRY ISSDQFSPEY LLDCLDLSSE HQAIEIANRV ESSIYFWHKR SNSKPATNTK TSWEMVKELM VDGEKLELMA DRAESLLLSL KQRFPGLPQT
401: ALDMSKIQYN KDIGKSILES YSRVLESLAF NIVARIDDLL FVDDLTRHSS DQIPTTLGNN GSDAVKNNAL SATTYTTPSY SPAKAELGTS VTTVPPSPSR
501: FKIPHSSSVK RVLTAYVTKN EPRLKDIQVE RSSRSSSSER LSLEKCMKES LNVSNLDPGI
001: MDGSSENLPE VEEKGRESSC CSSETTRQEE EEQSPSCTED FTASPVSSRW SVKNIDGEKK KIRSDSRVSE VEMMKERFSK LLLGEDMSGS GNGVCTALAI
101: SNAITNLCAT LFGQLWRLEP LPTEKKEMWR REMEWLLCVS DHIVEMTPTW QTFPDGTKLE IMTCRPRSDL YVNLPALRKL DNMLLEILDS FEETEFWYVD
201: QGIMAHESAA DGSSSFRKSF QRQEDKWWLP VPRVSPGGLQ ENSRKQLQHK RDCTNQILKA AMAINSITLA DMEIPESYLE SLPRKGRSCL GDLIYRYISS
301: DQFSPECLLD CLDLSSEHQA IEIANRVESS IYLWHKRTNS KPATNTKTSW EMVKELMVDA DKLELMADRA ESLLLSLKQR FPGLPQTALD MSKIQYNKDI
401: GKSILESYSR VLESLAFNIV ARIDDLLFVD DLTRHSSDQI PTTLGNNGND APKSIAVPVS NYTTPSYSPS KQELRSSITV PPSPSRFKIP HSSSVKRVLT
501: AYVTKNEPRL KNLPLERSSR SSSSERLSLE KCMKESLNVS NLDPGI
101: SNAITNLCAT LFGQLWRLEP LPTEKKEMWR REMEWLLCVS DHIVEMTPTW QTFPDGTKLE IMTCRPRSDL YVNLPALRKL DNMLLEILDS FEETEFWYVD
201: QGIMAHESAA DGSSSFRKSF QRQEDKWWLP VPRVSPGGLQ ENSRKQLQHK RDCTNQILKA AMAINSITLA DMEIPESYLE SLPRKGRSCL GDLIYRYISS
301: DQFSPECLLD CLDLSSEHQA IEIANRVESS IYLWHKRTNS KPATNTKTSW EMVKELMVDA DKLELMADRA ESLLLSLKQR FPGLPQTALD MSKIQYNKDI
401: GKSILESYSR VLESLAFNIV ARIDDLLFVD DLTRHSSDQI PTTLGNNGND APKSIAVPVS NYTTPSYSPS KQELRSSITV PPSPSRFKIP HSSSVKRVLT
501: AYVTKNEPRL KNLPLERSSR SSSSERLSLE KCMKESLNVS NLDPGI
Arabidopsis Description
ROPGEF7Rop guanine nucleotide exchange factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZN0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.