CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 2
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00070	Soybean	nucleus	81.82	95.43
GSMUA_Achr9P03750_001	Banana	cytosol	43.5	66.74
KRH65969	Soybean	nucleus	56.36	66.72
VIT_08s0007g01380.t01	Wine grape	nucleus	56.5	66.34
KRH75747	Soybean	nucleus	53.85	65.81
AT5G02010.1	Thale cress	nucleus	49.51	64.84
Solyc09g011480.2.1	Tomato	nucleus	51.47	62.59
CDY40325	Canola	nucleus	48.11	61.43
CDY10476	Canola	nucleus	47.97	61.25
Bra009621.1-P	Field mustard	nucleus	47.69	60.89
PGSC0003DMT400005554	Potato	cytosol, plastid	54.27	58.88
Os01t0849100-01	Rice	cytosol	44.9	58.79
KRH73109	Soybean	nucleus	45.59	58.53
Solyc10g086660.1.1	Tomato	nucleus	55.52	58.47
TraesCS3D01G357800.1	Wheat	cytosol	43.92	58.36
EES03886	Sorghum	cytosol	44.48	58.35
TraesCS3A01G364400.1	Wheat	nucleus	44.06	58.23
PGSC0003DMT400049230	Potato	nucleus	56.08	57.95
TraesCS3B01G396500.1	Wheat	cytosol	43.64	57.88
KRG97804	Soybean	nucleus	46.57	56.16
TraesCS1D01G280000.1	Wheat	cytosol	43.36	55.46
KRH31060	Soybean	nucleus	46.29	55.35
Zm00001d042861_P001	Maize	cytosol	44.34	55.32
TraesCS1B01G289900.1	Wheat	cytosol	43.5	54.95
HORVU1Hr1G072910.3	Barley	cytosol	43.08	54.61
KRH15022	Soybean	nucleus	42.66	54.37
Os05t0454200-01	Rice	nucleus	42.66	53.7
EES18335	Sorghum	cytosol	43.92	53.58
KRH15734	Soybean	cytosol	19.3	53.08
Zm00001d010062_P001	Maize	peroxisome	41.96	51.99
TraesCS1A01G280900.2	Wheat	cytosol	42.52	51.61
VIT_08s0007g01390.t01	Wine grape	nucleus	42.24	50.76
HORVU3Hr1G085680.2	Barley	plastid	45.59	49.92
KRH29101	Soybean	cytosol, plastid	39.02	49.29
KRH65102	Soybean	nucleus	33.15	49.27
KRH24128	Soybean	cytosol	39.02	49.12
KRG94270	Soybean	mitochondrion	7.55	48.65
KRH44350	Soybean	nucleus	30.35	47.8
KRH48179	Soybean	nucleus	24.2	46.13
KRH00737	Soybean	nucleus, plastid	32.87	45.9
KRH40457	Soybean	cytosol	32.17	44.92
KRH39304	Soybean	nucleus	30.49	41.92
KRH09881	Soybean	cytosol	31.05	41.65
KRH23439	Soybean	nucleus	31.05	41.57
KRH47282	Soybean	nucleus	31.19	41.45
KRH48369	Soybean	mitochondrion	31.61	40.21
Zm00001d047899_P001	Maize	cytosol	14.69	37.77
KRH07751	Soybean	cytosol, nucleus, plastid	27.55	35.5
KRH07240	Soybean	cytosol, nucleus, plastid	27.55	35.43
KRH76428	Soybean	mitochondrion, nucleus	27.13	34.46
Zm00001d023356_P001	Maize	cytosol	17.06	34.37
KRH39757	Soybean	mitochondrion, nucleus	26.85	34.1
Zm00001d037119_P001	Maize	plastid	19.44	32.25
Zm00001d049679_P001	Maize	plastid	19.02	30.77
GSMUA_Achr6P14950_001	Banana	mitochondrion	43.64	23.49

Protein Annotations

Gene3D:1.20.58.1310	Gene3D:1.20.58.2010	EntrezGene:100800673	MapMan:27.4.3.1	EMBL:ACUP02004340	EnsemblPlantsGene:GLYMA_07G139500
GO:GO:0003674	GO:GO:0005085	GO:GO:0005089	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0065009	InterPro:IPR005512	UniProt:K7L1L5	EnsemblPlants:KRH49210	ProteinID:KRH49210	ProteinID:KRH49210.1
PFAM:PF03759	InterPro:PRONE_dom	PFscan:PS51334	PANTHER:PTHR33101	PANTHER:PTHR33101:SF14	InterPro:RopGEF
UniParc:UPI00023C7BF1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:16564701..16569076

Molecular Weight (calculated)

79712.2 Da

IEP (calculated)

6.042

GRAVY (calculated)

-0.474

Length

715 amino acids

Sequence
(BLAST)

001: MDSTFTQQEV REQTQQHQHQ KKHCGPLVRL SRRSTNPNPF SILVFWVSKS LRSLCFRVQL SQQGFCLRRI QYHHGMVINT PVLHASSSSS EEEEEGKASH
101: AAMEGLSLAE KSTEAVEESN KGIENGSKRE TFADLIEEKG RESSFSSEFL SSETTHGEHS RSSTEDSSSS PSVGWPVQEI AASDCASPHG SEDGEKKHLV
201: LENKEFEKRV SALPEVEMMK ERFAKLLLGE DMSGCGNGVT TALAISNAIT NLCATLFGQL WRLEPLRSEK KAMWRREIEW FLSVSDHIVE LTPNWQTFPD
301: GSKLEVMTCR PRSDLYVNLP ALRKLDNMLL EILDSFVNTE FWYIDQGVLA PDADGPSSFR QALQRQEEKW WLPVPRVPPC GLNENSRKQL QHKRDSTNQI
401: LKAAMAINSI TLAEMDIPES YLESLPKNAR VSLGDVIYRY ITSDHFSPEC LLACLDLSSE HQAIEIANRA EASMYIWRKR TNSKPASISA RSSSRTSWEM
501: VKDLMVDADK RDLFAERAES LLLSLKQRFP GLPQTALDMS KIQYNKDIGK AILESYSRVL ESLAFNMVAR IDDVLYVDDL TKNLDKISSL SKVGVVTHKS
601: ISVPHSVPIP GTPYKSAFGT PTLSPAHGIS SPAKLGKSPL INDSSLPQRG SGIKKSLTDF LSIDPKGKES GSSIEKQVPE SNTLDEVTTC ETDVESSDCT
701: EGGASPSILD RKWHV

Best Arabidopsis Sequence Match ( AT5G02010.1 )
(BLAST)

001: MDGSSENLPE VEEKGRESSC CSSETTRQEE EEQSPSCTED FTASPVSSRW SVKNIDGEKK KIRSDSRVSE VEMMKERFSK LLLGEDMSGS GNGVCTALAI
101: SNAITNLCAT LFGQLWRLEP LPTEKKEMWR REMEWLLCVS DHIVEMTPTW QTFPDGTKLE IMTCRPRSDL YVNLPALRKL DNMLLEILDS FEETEFWYVD
201: QGIMAHESAA DGSSSFRKSF QRQEDKWWLP VPRVSPGGLQ ENSRKQLQHK RDCTNQILKA AMAINSITLA DMEIPESYLE SLPRKGRSCL GDLIYRYISS
301: DQFSPECLLD CLDLSSEHQA IEIANRVESS IYLWHKRTNS KPATNTKTSW EMVKELMVDA DKLELMADRA ESLLLSLKQR FPGLPQTALD MSKIQYNKDI
401: GKSILESYSR VLESLAFNIV ARIDDLLFVD DLTRHSSDQI PTTLGNNGND APKSIAVPVS NYTTPSYSPS KQELRSSITV PPSPSRFKIP HSSSVKRVLT
501: AYVTKNEPRL KNLPLERSSR SSSSERLSLE KCMKESLNVS NLDPGI

Arabidopsis Description

ROPGEF7Rop guanine nucleotide exchange factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZN0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.