Factsheet for Zm00001d047899_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037119_P001	Maize	plastid	99.64	64.27
Zm00001d049679_P001	Maize	plastid	93.53	58.82
Zm00001d023356_P001	Maize	cytosol	39.93	31.27
Zm00001d006269_P001	Maize	cytosol	34.17	24.74
EES03886	Sorghum	cytosol	46.4	23.67
Zm00001d042861_P001	Maize	cytosol	47.84	23.21
TraesCS3A01G364400.1	Wheat	nucleus	44.6	22.92
TraesCS3D01G357800.1	Wheat	cytosol	44.24	22.86
GSMUA_Achr9P03750_001	Banana	cytosol	38.13	22.75
TraesCS3B01G396500.1	Wheat	cytosol	43.88	22.63
Os01t0849100-01	Rice	cytosol	43.88	22.34
Zm00001d012691_P001	Maize	cytosol, extracellular, mitochondrion, plastid	22.66	21.95
Solyc08g006550.2.1	Tomato	nucleus	38.13	20.0
PGSC0003DMT400067654	Potato	nucleus	38.13	19.92
HORVU3Hr1G085680.2	Barley	plastid	43.17	18.38
AT5G02010.1	Thale cress	nucleus	35.97	18.32
Zm00001d010062_P001	Maize	peroxisome	37.05	17.85
VIT_13s0019g02710.t01	Wine grape	nucleus	38.13	17.79
Bra009621.1-P	Field mustard	nucleus	35.61	17.68
CDY10476	Canola	nucleus	35.61	17.68
Zm00001d002696_P001	Maize	cytosol	29.14	17.53
VIT_08s0007g01380.t01	Wine grape	nucleus	38.13	17.41
KRH73109	Soybean	nucleus	34.53	17.24
KRG97804	Soybean	nucleus	36.69	17.2
CDY40325	Canola	nucleus	34.53	17.14
KRH31060	Soybean	nucleus	36.69	17.06
Solyc09g011480.2.1	Tomato	nucleus	35.97	17.01
Zm00001d029850_P001	Maize	nucleus, plastid	29.86	16.97
KRH00070	Soybean	nucleus	37.41	16.97
Zm00001d021464_P002	Maize	nucleus, plastid	34.89	16.81
KRH75747	Soybean	nucleus	35.25	16.75
CDY41197	Canola	cytosol, plastid	33.09	16.61
Zm00001d021489_P001	Maize	nucleus, plastid	27.7	16.59
CDY40246	Canola	cytosol, plastid	33.09	16.52
KRH65969	Soybean	nucleus	35.61	16.39
Bra007183.1-P	Field mustard	cytosol, plastid	33.09	16.11
VIT_08s0007g01390.t01	Wine grape	nucleus	33.81	15.8
Bra009152.1-P	Field mustard	cytosol, plastid	33.45	15.63
PGSC0003DMT400005554	Potato	cytosol, plastid	36.33	15.33
Zm00001d053307_P002	Maize	cytosol, plastid	26.62	15.32
Zm00001d038989_P002	Maize	nucleus, plastid	28.06	15.29
AT3G55660.1	Thale cress	cytosol, plastid	31.65	15.2
PGSC0003DMT400049230	Potato	nucleus	37.77	15.17
Solyc10g086660.1.1	Tomato	nucleus	37.05	15.17
CDX98888	Canola	cytosol	34.17	14.89
CDX70109	Canola	cytosol	33.45	14.69
KRH49210	Soybean	nucleus, plastid	37.77	14.69
AT5G05940.1	Thale cress	cytosol	32.01	14.57
Zm00001d009549_P002	Maize	mitochondrion	28.42	14.31
KRH15022	Soybean	nucleus	28.78	14.26
Zm00001d016001_P002	Maize	mitochondrion	27.34	14.23
Zm00001d043383_P001	Maize	nucleus	25.54	13.58
Zm00001d043889_P001	Maize	mitochondrion	26.26	12.07
Zm00001d051553_P004	Maize	cytosol	23.38	12.04
Zm00001d017755_P002	Maize	cytosol	23.38	12.01
GSMUA_Achr6P14950_001	Banana	mitochondrion	37.05	7.76

Protein Annotations

KEGG:00860+1.14.14.18	Gene3D:1.20.58.2010	Gene3D:1.20.910.10	MapMan:27.4.3.1	MapMan:7.12.5.2	UniProt:A0A1D6PEN7
ProteinID:AQL07997.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004392	GO:GO:0005085	GO:GO:0005089
GO:GO:0005488	GO:GO:0005515	GO:GO:0006788	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0055114	GO:GO:0065009	InterPro:Haem_Oase-like	InterPro:Haem_Oase-like_multi-hlx	InterPro:IPR005512
InterPro:IPR016084	PFAM:PF01126	PFAM:PF03759	InterPro:PRONE_dom	PFscan:PS51334	PANTHER:PTHR33101
PANTHER:PTHR33101:SF27	InterPro:RopGEF	SUPFAM:SSF48613	UniParc:UPI000844C415	EnsemblPlantsGene:Zm00001d047899	EnsemblPlants:Zm00001d047899_P001
EnsemblPlants:Zm00001d047899_T001	:	:	:	:	:

Description

Rop guanine nucleotide exchange factor 7

Coordinates

chr9:-:144751073..144753553

Molecular Weight (calculated)

31929.9 Da

IEP (calculated)

6.626

GRAVY (calculated)

-0.538

Length

278 amino acids

Sequence
(BLAST)

001: MAFHRRDEKW WLPVPRVPPG GLHNKTRKQL QHKRDCANQI LKAAMAINSN TLAEMEVPEP YLDSLPKNGR STLGDIIYRY ITSDQFSPEC LLDCLDLSTE
101: YQALEVANRV EASMFPGLTQ TSLDMSKIQY NKVFLSLIWF SQYSIHNQIT DAEFRNTGLE RSEALKNDLE WFRQQGHTIP KPSAPGTTYT SLLEDLSEED
201: PQAFICHFYN VYFAHTAGGR MIGKKGFRED SKDLEFYKWE GNLSQLLQNV RNKLNQVASV GARAMPRNIN CEPPMDFI

Best Arabidopsis Sequence Match ( AT2G26670.1 )
(BLAST)

001: MAYLAPISSS LSIFKNPQLS RFQFSSSSPN PLFLRPRIQI LSMTMNKSPS LVVVAATTAA EKQKKRYPGE SKGFVEEMRF VAMRLHTKDQ AKEGEKETKS
101: IEERPVAKWE PTVEGYLRFL VDSKLVYDTL ELIIQDSNFP TYAEFKNTGL ERAEKLSTDL EWFKEQGYEI PEPTAPGKTY SQYLKELAEK DPQAFICHFY
201: NIYFAHSAGG RMIGRKVAER ILDNKELEFY KWDGELSQLL QNVREKLNKV AEEWTREEKN HCLEETEKSF KYSGEILRLI LS

Arabidopsis Description

HO1TED4 [Source:UniProtKB/TrEMBL;Acc:A0A178VP48]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.