Factsheet for Zm00001d042861_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03886	Sorghum	cytosol	90.92	95.6
Os01t0849100-01	Rice	cytosol	78.71	82.6
TraesCS3B01G396500.1	Wheat	cytosol	75.04	79.78
TraesCS3D01G357800.1	Wheat	cytosol	74.87	79.74
TraesCS3A01G364400.1	Wheat	nucleus	74.52	78.93
GSMUA_Achr9P03750_001	Banana	cytosol	55.32	68.03
HORVU3Hr1G085680.2	Barley	plastid	74.17	65.08
Zm00001d010062_P001	Maize	peroxisome	64.4	63.95
PGSC0003DMT400067654	Potato	nucleus	54.97	59.21
Solyc08g006550.2.1	Tomato	nucleus	54.62	59.06
AT5G02010.1	Thale cress	nucleus	52.88	55.49
VIT_13s0019g02710.t01	Wine grape	nucleus	57.59	55.37
VIT_08s0007g01380.t01	Wine grape	nucleus	57.77	54.35
Bra009621.1-P	Field mustard	nucleus	53.05	54.29
CDY10476	Canola	nucleus	53.05	54.29
KRH73109	Soybean	nucleus	52.71	54.22
CDY40325	Canola	nucleus	52.71	53.93
Solyc09g011480.2.1	Tomato	nucleus	54.28	52.89
KRG97804	Soybean	nucleus	54.28	52.45
KRH00070	Soybean	nucleus	55.67	52.04
KRH31060	Soybean	nucleus	54.1	51.84
KRH15022	Soybean	nucleus	49.91	50.98
Bra009152.1-P	Field mustard	cytosol, plastid	52.18	50.25
KRH75747	Soybean	nucleus	51.13	50.09
KRH65969	Soybean	nucleus	52.36	49.67
Zm00001d002696_P001	Maize	cytosol	39.79	49.35
CDY41197	Canola	cytosol, plastid	46.77	48.38
AT5G05940.1	Thale cress	cytosol	51.31	48.12
CDY40246	Canola	cytosol, plastid	46.77	48.11
Solyc10g086660.1.1	Tomato	nucleus	56.89	48.01
Zm00001d021489_P001	Maize	nucleus, plastid	38.74	47.84
Zm00001d047899_P001	Maize	cytosol	23.21	47.84
PGSC0003DMT400049230	Potato	nucleus	57.59	47.69
Zm00001d006269_P001	Maize	cytosol	31.94	47.66
PGSC0003DMT400005554	Potato	cytosol, plastid	54.45	47.34
CDX70109	Canola	cytosol	52.18	47.24
AT3G55660.1	Thale cress	cytosol, plastid	47.64	47.15
Zm00001d029850_P001	Maize	nucleus, plastid	40.14	47.03
Bra007183.1-P	Field mustard	cytosol, plastid	46.77	46.94
CDX98888	Canola	cytosol	52.01	46.71
VIT_08s0007g01390.t01	Wine grape	nucleus	46.95	45.21
Zm00001d021464_P002	Maize	nucleus, plastid	44.68	44.37
KRH49210	Soybean	nucleus, plastid	55.32	44.34
Zm00001d012691_P001	Maize	cytosol, extracellular, mitochondrion, plastid	21.82	43.55
Zm00001d023356_P001	Maize	cytosol	26.35	42.54
Zm00001d037119_P001	Maize	plastid	30.72	40.84
Zm00001d053307_P002	Maize	cytosol, plastid	34.03	40.37
Zm00001d049679_P001	Maize	plastid	30.37	39.37
Zm00001d038989_P002	Maize	nucleus, plastid	33.68	37.84
Zm00001d043383_P001	Maize	nucleus	33.86	37.09
Zm00001d016001_P002	Maize	mitochondrion	34.38	36.89
Zm00001d009549_P002	Maize	mitochondrion	33.86	35.14
Zm00001d017755_P002	Maize	cytosol	31.94	33.83
Zm00001d051553_P004	Maize	cytosol	31.41	33.33
Zm00001d043889_P001	Maize	mitochondrion	34.9	33.06
GSMUA_Achr6P14950_001	Banana	mitochondrion	52.53	22.67

Protein Annotations

Gene3D:1.20.58.2010	MapMan:27.4.3.1	UniProt:A0A1D6N749	GO:GO:0003674	GO:GO:0005085	GO:GO:0005089
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0065009	InterPro:IPR005512	ProteinID:ONM36414.1
PFAM:PF03759	InterPro:PRONE_dom	PFscan:PS51334	PANTHER:PTHR33101	PANTHER:PTHR33101:SF1	InterPro:RopGEF
UniParc:UPI000842F977	EnsemblPlantsGene:Zm00001d042861	EnsemblPlants:Zm00001d042861_P001	EnsemblPlants:Zm00001d042861_T001	SEG:seg	:

Description

Rop guanine nucleotide exchange factor 7

Coordinates

chr3:+:182285596..182289503

Molecular Weight (calculated)

63253.6 Da

IEP (calculated)

6.675

GRAVY (calculated)

-0.361

Length

573 amino acids

Sequence
(BLAST)

001: MGSAGEEERE ARSEAAFTDS ASIDGSSSSS DAASTDEWLP AAPVPVPAAR KPGGCASDTD VARQQHKHKR RAPSEMEMMK ERFAKLLLGE DMSGSGKGVC
101: TALAISNAIT NLCGQNSSPL LGAELSKFLN DASIFRSAAT IFGQLWRLEP LPPEKKAMWR REMDWLLCIS DHIVELVPTW QSFPDGTRLE IMTSRPRSDL
201: YINLPALRKL DHMLLEILES FRDPEFWYVE QGIAAPDCDG SASFRVAFHR RDEKWWLPVP RVPPGGLHNK TRKQLQHKRD CANQILKAAM AINSNTLAEM
301: EVPEPYLDSL PKNGRSTLGD IIYRYITSDQ FSPECLLDCL DLSTEYQALE VANRVEASVY VWRRRVAAKP VNGLGRSSSA RSSWGMVKDM MVDSEKRELL
401: LAERAEGLLI CLKQRFPGLT QTSLDMSKIQ YNKDVGKSIL ESYSRVLESL ASNIVTRIDD LLNIDELNGH AEHFAATGDA DCKIAVSQTA VPSFPVPASG
501: TPFMMAYTTP SFSPAQLASP SKKEKTSLTP GRRSQHSRGA GTKKGLMDRV GTEIKGMMIS NGMMIDVSTT TEL

Best Arabidopsis Sequence Match ( AT5G02010.1 )
(BLAST)

001: MDGSSENLPE VEEKGRESSC CSSETTRQEE EEQSPSCTED FTASPVSSRW SVKNIDGEKK KIRSDSRVSE VEMMKERFSK LLLGEDMSGS GNGVCTALAI
101: SNAITNLCAT LFGQLWRLEP LPTEKKEMWR REMEWLLCVS DHIVEMTPTW QTFPDGTKLE IMTCRPRSDL YVNLPALRKL DNMLLEILDS FEETEFWYVD
201: QGIMAHESAA DGSSSFRKSF QRQEDKWWLP VPRVSPGGLQ ENSRKQLQHK RDCTNQILKA AMAINSITLA DMEIPESYLE SLPRKGRSCL GDLIYRYISS
301: DQFSPECLLD CLDLSSEHQA IEIANRVESS IYLWHKRTNS KPATNTKTSW EMVKELMVDA DKLELMADRA ESLLLSLKQR FPGLPQTALD MSKIQYNKDI
401: GKSILESYSR VLESLAFNIV ARIDDLLFVD DLTRHSSDQI PTTLGNNGND APKSIAVPVS NYTTPSYSPS KQELRSSITV PPSPSRFKIP HSSSVKRVLT
501: AYVTKNEPRL KNLPLERSSR SSSSERLSLE KCMKESLNVS NLDPGI

Arabidopsis Description

ROPGEF7Rop guanine nucleotide exchange factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZN0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.