Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g006550.2.1 | Tomato | nucleus | 68.88 | 60.57 |
| PGSC0003DMT400067654 | Potato | nucleus | 68.88 | 60.34 |
| EES03886 | Sorghum | cytosol | 68.88 | 58.9 |
| Os01t0849100-01 | Rice | cytosol | 68.88 | 58.79 |
| KRH73109 | Soybean | nucleus | 68.24 | 57.09 |
| TraesCS3D01G357800.1 | Wheat | cytosol | 65.88 | 57.06 |
| VIT_13s0019g02710.t01 | Wine grape | nucleus | 72.96 | 57.05 |
| TraesCS3B01G396500.1 | Wheat | cytosol | 65.88 | 56.96 |
| TraesCS3A01G364400.1 | Wheat | nucleus | 65.88 | 56.75 |
| VIT_08s0007g01380.t01 | Wine grape | nucleus | 73.82 | 56.49 |
| AT5G02010.1 | Thale cress | nucleus | 65.02 | 55.49 |
| Zm00001d042861_P001 | Maize | cytosol | 68.03 | 55.32 |
| Os05t0454200-01 | Rice | nucleus | 66.74 | 54.75 |
| KRG97804 | Soybean | nucleus | 68.67 | 53.96 |
| KRH31060 | Soybean | nucleus | 68.88 | 53.68 |
| CDY10476 | Canola | nucleus | 64.38 | 53.57 |
| KRH15022 | Soybean | nucleus | 64.38 | 53.48 |
| CDY40325 | Canola | nucleus | 64.16 | 53.39 |
| Bra009621.1-P | Field mustard | nucleus | 64.16 | 53.39 |
| TraesCS1D01G280000.1 | Wheat | cytosol | 63.95 | 53.31 |
| HORVU1Hr1G072910.3 | Barley | cytosol | 64.16 | 53.01 |
| TraesCS1B01G289900.1 | Wheat | cytosol | 64.38 | 53.0 |
| EES18335 | Sorghum | cytosol | 66.52 | 52.9 |
| Bra009152.1-P | Field mustard | cytosol, plastid | 67.38 | 52.77 |
| Solyc09g011480.2.1 | Tomato | nucleus | 66.52 | 52.72 |
| Zm00001d010062_P001 | Maize | peroxisome | 64.38 | 51.99 |
| AT5G05940.1 | Thale cress | cytosol | 67.6 | 51.55 |
| KRH00070 | Soybean | nucleus | 66.95 | 50.9 |
| TraesCS1A01G280900.2 | Wheat | cytosol | 63.73 | 50.42 |
| Solyc10g086660.1.1 | Tomato | nucleus | 72.96 | 50.07 |
| KRH65969 | Soybean | nucleus | 64.16 | 49.5 |
| CDX70109 | Canola | cytosol | 67.17 | 49.45 |
| CDX98888 | Canola | cytosol | 67.6 | 49.37 |
| PGSC0003DMT400049230 | Potato | nucleus | 72.96 | 49.13 |
| GSMUA_Achr2P09130_001 | Banana | cytosol | 40.99 | 48.85 |
| KRH75747 | Soybean | nucleus | 61.16 | 48.72 |
| GSMUA_Achr10P... | Banana | cytosol | 53.65 | 48.26 |
| PGSC0003DMT400005554 | Potato | cytosol, plastid | 67.38 | 47.65 |
| GSMUA_Achr5P06900_001 | Banana | cytosol | 42.7 | 47.27 |
| HORVU3Hr1G085680.2 | Barley | plastid | 66.09 | 47.17 |
| CDY41197 | Canola | cytosol, plastid | 56.01 | 47.11 |
| GSMUA_Achr6P14020_001 | Banana | cytosol | 43.56 | 47.1 |
| CDY40246 | Canola | cytosol, plastid | 55.79 | 46.68 |
| GSMUA_Achr5P20570_001 | Banana | nucleus | 48.07 | 46.47 |
| GSMUA_Achr2P03580_001 | Banana | nucleus | 50.43 | 46.35 |
| Bra007183.1-P | Field mustard | cytosol, plastid | 55.79 | 45.53 |
| AT3G55660.1 | Thale cress | cytosol, plastid | 56.22 | 45.25 |
| GSMUA_Achr3P14650_001 | Banana | nucleus | 54.08 | 44.37 |
| GSMUA_Achr4P10530_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 40.99 | 44.32 |
| GSMUA_Achr1P18140_001 | Banana | nucleus | 52.36 | 44.12 |
| VIT_08s0007g01390.t01 | Wine grape | nucleus | 56.01 | 43.87 |
| KRH49210 | Soybean | nucleus, plastid | 66.74 | 43.5 |
| GSMUA_Achr3P03410_001 | Banana | nucleus | 43.56 | 40.12 |
| GSMUA_Achr3P15410_001 | Banana | nucleus | 41.85 | 39.31 |
| Zm00001d047899_P001 | Maize | cytosol | 22.75 | 38.13 |
| GSMUA_Achr8P14480_001 | Banana | nucleus | 19.53 | 35.14 |
| GSMUA_Achr8P14490_001 | Banana | cytosol | 14.38 | 34.9 |
| Zm00001d023356_P001 | Maize | cytosol | 25.32 | 33.24 |
| Zm00001d037119_P001 | Maize | plastid | 30.26 | 32.71 |
| Zm00001d049679_P001 | Maize | plastid | 30.04 | 31.67 |
| GSMUA_Achr11P... | Banana | cytosol | 22.32 | 31.14 |
| GSMUA_Achr6P14950_001 | Banana | mitochondrion | 76.18 | 26.73 |
| GSMUA_Achr11P... | Banana | cytosol | 10.09 | 25.82 |
Protein Annotations
| Gene3D:1.20.58.2010 | MapMan:27.4.3.1 | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005089 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0065009 | EnsemblPlantsGene:GSMUA_Achr9G03750_001 | EnsemblPlants:GSMUA_Achr9P03750_001 | EnsemblPlants:GSMUA_Achr9T03750_001 |
| InterPro:IPR005512 | UniProt:M0TX84 | PFAM:PF03759 | InterPro:PRONE_dom | PFscan:PS51334 | PANTHER:PTHR33101 |
| PANTHER:PTHR33101:SF1 | InterPro:RopGEF | UniParc:UPI000295C569 | SEG:seg | : | : |
Description
Rop guanine nucleotide exchange factor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G03750_001]
Coordinates
chr9:+:2576808..2578591
Molecular Weight (calculated)
52196.8 Da
IEP (calculated)
7.603
GRAVY (calculated)
-0.237
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKERFSKLL LGEDMSGCGK GACTALAISN AITNLCATIF GQLWRLEPLS SEKKTMWRRE MEWLLCVSDH IVEMIPSWQT FPDGSKFEVM TCRPRSDLCI
101: NLPALRKLDN MLLEILDSFS DPEFWYVDQG ILAPDSDGSA SFRRTLHRQE EKWWLPVPRF PPGGLHEKTR KELQHKRECT SQILKAAMAI NSNSLAEMEV
201: PESYLSSLPK NGRASLGDVI HRYVSSDQFS PECLLDCLDL SSEHRVLEVA NRVEASIYIW RRRAAMKPAS SSTAKSSWEI VKDMIVDADK RELLAERAET
301: LLLCLKQRFP SLTQTSLDTS KIQFNKDIGK SILESYSRVL ESLAFNIVAR IDDLLHVDDF CKHSDPLLAV PAVSIIAQKK VTVPASGTPC MTAYATPCFS
401: PAPLISPAGR ERSPLINKKP SSRGFGVKKV LTSYLNVELR TKSPIDATEP SEVVSNRYSE ISSSAS
101: NLPALRKLDN MLLEILDSFS DPEFWYVDQG ILAPDSDGSA SFRRTLHRQE EKWWLPVPRF PPGGLHEKTR KELQHKRECT SQILKAAMAI NSNSLAEMEV
201: PESYLSSLPK NGRASLGDVI HRYVSSDQFS PECLLDCLDL SSEHRVLEVA NRVEASIYIW RRRAAMKPAS SSTAKSSWEI VKDMIVDADK RELLAERAET
301: LLLCLKQRFP SLTQTSLDTS KIQFNKDIGK SILESYSRVL ESLAFNIVAR IDDLLHVDDF CKHSDPLLAV PAVSIIAQKK VTVPASGTPC MTAYATPCFS
401: PAPLISPAGR ERSPLINKKP SSRGFGVKKV LTSYLNVELR TKSPIDATEP SEVVSNRYSE ISSSAS
001: MENLVKSCAG IEKKRSNLTP SMEDILTESK ERSSTSGASY ESSSTTTVAS SSPPPPPSQI LGWPIRKASF RKNSKESVNF DHKKLTLHDD SGFKAKEMNS
101: ADVEMMKERF AKLLLGEDMS GSGKGVCTAL AISNAITNLC ATIFGQLWRL EPLSSEKKEM WRREMEWILS VSDHIVELTP STQTYPDGNK FEVMTCRPRF
201: DLFINLPALR KLDNMLLDIL ASFKKTEFWY VDQGIVASEN DGSASFRRKI QRQEEKWWLP VPRLAPNGLT EEARTELNHK RECATQILKA AMAINSLALT
301: EMDVPKSYLE TLPKNGRSCL GDVIYRYVTS DKFSAESLLD CLDLSSEHIA LDIANRVEAS IYVWRRRVQT KLGVNNNTSS TTPKLTWEMV KELMAAGDKR
401: GLLVERSETL LRCLKQRFPS LTQTSLDISK IQWNKDIGKS ILESYSRALE SLASNIIARI DDLLYVDDLT KQSDDNNLLS SPAVSSIIAH KKVVPLPYLI
501: SASGTPYRTS FSTTPGFSPS MISPKKGERR TPYSSKDTNK IIEKGLPSRG YGVRRVLNNY LGMESKLKIC VNPSDNADTA VINQISKDVE EEKKRNSTSV
601: HQKGPPKYTV S
101: ADVEMMKERF AKLLLGEDMS GSGKGVCTAL AISNAITNLC ATIFGQLWRL EPLSSEKKEM WRREMEWILS VSDHIVELTP STQTYPDGNK FEVMTCRPRF
201: DLFINLPALR KLDNMLLDIL ASFKKTEFWY VDQGIVASEN DGSASFRRKI QRQEEKWWLP VPRLAPNGLT EEARTELNHK RECATQILKA AMAINSLALT
301: EMDVPKSYLE TLPKNGRSCL GDVIYRYVTS DKFSAESLLD CLDLSSEHIA LDIANRVEAS IYVWRRRVQT KLGVNNNTSS TTPKLTWEMV KELMAAGDKR
401: GLLVERSETL LRCLKQRFPS LTQTSLDISK IQWNKDIGKS ILESYSRALE SLASNIIARI DDLLYVDDLT KQSDDNNLLS SPAVSSIIAH KKVVPLPYLI
501: SASGTPYRTS FSTTPGFSPS MISPKKGERR TPYSSKDTNK IIEKGLPSRG YGVRRVLNNY LGMESKLKIC VNPSDNADTA VINQISKDVE EEKKRNSTSV
601: HQKGPPKYTV S
Arabidopsis Description
ROPGEF5Rop guanine nucleotide exchange factor 5 [Source:UniProtKB/Swiss-Prot;Acc:F4K295]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.