Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P14490_001 | Banana | cytosol | 42.86 | 40.62 |
| PGSC0003DMT400075550 | Potato | extracellular | 29.12 | 25.73 |
| TraesCS6B01G298000.1 | Wheat | cytosol | 52.2 | 17.5 |
| TraesCS6A01G270900.1 | Wheat | cytosol | 51.65 | 17.31 |
| TraesCS6D01G244200.1 | Wheat | cytosol | 51.1 | 17.13 |
| KXG30927 | Sorghum | cytosol | 50.55 | 17.04 |
| Zm00001d051553_P004 | Maize | cytosol | 48.9 | 16.48 |
| Zm00001d017755_P002 | Maize | cytosol | 48.9 | 16.45 |
| Os02t0702600-02 | Rice | cytosol | 48.9 | 16.39 |
| KRH07751 | Soybean | cytosol, nucleus, plastid | 47.8 | 15.68 |
| KRH39757 | Soybean | mitochondrion, nucleus | 47.8 | 15.45 |
| KRH07240 | Soybean | cytosol, nucleus, plastid | 46.7 | 15.29 |
| KRH76428 | Soybean | mitochondrion, nucleus | 46.7 | 15.1 |
| Solyc08g075120.2.1 | Tomato | extracellular | 46.15 | 14.92 |
| PGSC0003DMT400053650 | Potato | cytosol, nucleus, plastid | 46.15 | 14.92 |
| Bra005322.1-P | Field mustard | nucleus | 29.67 | 13.78 |
| CDY12303 | Canola | nucleus | 39.01 | 12.61 |
| CDY62299 | Canola | cytosol, nucleus, plastid | 38.46 | 12.5 |
| AT1G31650.1 | Thale cress | mitochondrion, nucleus | 39.01 | 12.33 |
| GSMUA_Achr6P14020_001 | Banana | cytosol | 28.57 | 12.06 |
| GSMUA_Achr5P06900_001 | Banana | cytosol | 26.92 | 11.64 |
| GSMUA_Achr4P10530_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 27.47 | 11.6 |
| GSMUA_Achr2P09130_001 | Banana | cytosol | 23.63 | 11.0 |
| CDX84189 | Canola | cytosol | 29.12 | 10.79 |
| Bra005323.1-P | Field mustard | nucleus | 29.67 | 10.78 |
| CDY31706 | Canola | cytosol | 29.67 | 10.74 |
| GSMUA_Achr9P03750_001 | Banana | cytosol | 25.82 | 10.09 |
| GSMUA_Achr3P03410_001 | Banana | nucleus | 28.02 | 10.08 |
| GSMUA_Achr3P15410_001 | Banana | nucleus | 26.92 | 9.88 |
| GSMUA_Achr10P... | Banana | cytosol | 26.92 | 9.46 |
| Solyc12g096220.1.1 | Tomato | nucleus | 37.36 | 9.34 |
| GSMUA_Achr1P18140_001 | Banana | nucleus | 26.92 | 8.86 |
| GSMUA_Achr3P14650_001 | Banana | nucleus | 26.92 | 8.63 |
| VIT_02s0087g00460.t01 | Wine grape | mitochondrion, nucleus | 41.76 | 8.33 |
| GSMUA_Achr5P20570_001 | Banana | nucleus | 21.98 | 8.3 |
| HORVU6Hr1G068660.4 | Barley | nucleus | 26.92 | 8.1 |
| GSMUA_Achr2P03580_001 | Banana | nucleus | 21.43 | 7.69 |
| HORVU6Hr1G041610.18 | Barley | plastid | 26.92 | 6.53 |
| GSMUA_Achr6P14950_001 | Banana | mitochondrion | 24.18 | 3.31 |
| CDY12411 | Canola | cytosol | 2.2 | 3.1 |
| GSMUA_Achr11P... | Banana | cytosol | 2.75 | 1.5 |
| GSMUA_Achr8P14480_001 | Banana | nucleus | 1.1 | 0.77 |
| CDY69871 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.58.1310 | Gene3D:1.20.58.2010 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005089 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0065009 | EnsemblPlantsGene:GSMUA_Achr11G06440_001 | EnsemblPlants:GSMUA_Achr11P06440_001 |
| EnsemblPlants:GSMUA_Achr11T06440_001 | InterPro:IPR005512 | UniProt:M0RPX4 | PFAM:PF03759 | InterPro:PRONE_dom | PFscan:PS51334 |
| PANTHER:PTHR33101 | PANTHER:PTHR33101:SF2 | InterPro:RopGEF | UniParc:UPI0002958F76 | SEG:seg | : |
Description
Putative uncharacterized protein Sb04g030700 [Source:GMGC_GENE;Acc:GSMUA_Achr11G06440_001]
Coordinates
chr11:-:5046551..5047762
Molecular Weight (calculated)
20558.7 Da
IEP (calculated)
9.672
GRAVY (calculated)
-0.308
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKSPIRYPW SFVKENGSEL EKRVVNLERA EALLHLLRIR FPNLPQSFID VTKVHHNKDV GHAITEAYSR VLGGLAFSIL SRIGDIFQED DLKNPTTPIA
101: NLKFDFSSNV YLAGIAETPP GHIKRSLIDQ MNTVDGRFSS FYIGKASEEH FLDGKAKRIT VVPTSPLRSR TWCYGREVCA TP
101: NLKFDFSSNV YLAGIAETPP GHIKRSLIDQ MNTVDGRFSS FYIGKASEEH FLDGKAKRIT VVPTSPLRSR TWCYGREVCA TP
001: MITYYGLETC IINNQSYEEE SGTSRGDGCL TDSLDDDAFS SCSSSKDASS SFSSKWLPMK NDEHSCDGLN LSGRSQHFDA KEKKKQGYGS SQHFDAKEKP
101: GYVYCHLDVE AMKEKFSKLL LGEDVTGGCK GVQVALALSN AVTHLATSIF GELWKLEPLC EEKKQKWRRE MDWLLSPTNY MIELVPSKQN DANGRSLEIM
201: TPKARADIHM NLPALQKLDS MLIETLDSMV NTEFWYSEIG SRAEGKNKST SESKRWWLPS PQVPKPGLSN SGRKKLLDKG KVVYQVFKAT KAINENILLE
301: MPVPIVIKEA IPKSGKNSLG DELYKMLAVE SATVDEIFIS LNLGTEHAAL ETVNKLESAM FAWKERITEQ GSNGKSPVRA SWSFAKDPLS EIGRNESLLN
401: RAEALRTQIK SKHPNLPHSF LDATKIQYDK DIGHAVLEAY SRTLANLAFR ILSRMGEILK EDSLSNPNSP APPSCFPSSR DPYRTPERPL LSSRVRHSLT
501: DDMNKADGTE TGLDFLFADA KASNSVNTTP SRSSRLWCLS KVPSDTSP
101: GYVYCHLDVE AMKEKFSKLL LGEDVTGGCK GVQVALALSN AVTHLATSIF GELWKLEPLC EEKKQKWRRE MDWLLSPTNY MIELVPSKQN DANGRSLEIM
201: TPKARADIHM NLPALQKLDS MLIETLDSMV NTEFWYSEIG SRAEGKNKST SESKRWWLPS PQVPKPGLSN SGRKKLLDKG KVVYQVFKAT KAINENILLE
301: MPVPIVIKEA IPKSGKNSLG DELYKMLAVE SATVDEIFIS LNLGTEHAAL ETVNKLESAM FAWKERITEQ GSNGKSPVRA SWSFAKDPLS EIGRNESLLN
401: RAEALRTQIK SKHPNLPHSF LDATKIQYDK DIGHAVLEAY SRTLANLAFR ILSRMGEILK EDSLSNPNSP APPSCFPSSR DPYRTPERPL LSSRVRHSLT
501: DDMNKADGTE TGLDFLFADA KASNSVNTTP SRSSRLWCLS KVPSDTSP
Arabidopsis Description
ROPGEF14Rop guanine nucleotide exchange factor 14 [Source:UniProtKB/Swiss-Prot;Acc:Q56WM6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.