Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62299 | Canola | cytosol, nucleus, plastid | 96.09 | 96.61 |
| AT1G31650.1 | Thale cress | mitochondrion, nucleus | 87.03 | 85.07 |
| CDY69871 | Canola | cytosol | 15.63 | 78.57 |
| CDY12411 | Canola | cytosol | 17.41 | 75.97 |
| CDY31706 | Canola | cytosol | 61.28 | 68.59 |
| CDX84189 | Canola | cytosol | 59.33 | 68.02 |
| KRH76428 | Soybean | mitochondrion, nucleus | 60.92 | 60.92 |
| KRH39757 | Soybean | mitochondrion, nucleus | 60.39 | 60.39 |
| Solyc08g075120.2.1 | Tomato | extracellular | 58.97 | 58.97 |
| KRH07751 | Soybean | cytosol, nucleus, plastid | 57.55 | 58.38 |
| PGSC0003DMT400053650 | Potato | cytosol, nucleus, plastid | 58.26 | 58.26 |
| KRH07240 | Soybean | cytosol, nucleus, plastid | 56.84 | 57.55 |
| GSMUA_Achr8P14480_001 | Banana | nucleus | 26.29 | 57.14 |
| GSMUA_Achr11P... | Banana | cytosol | 33.21 | 55.99 |
| Os02t0702600-02 | Rice | cytosol | 47.07 | 48.8 |
| TraesCS6B01G298000.1 | Wheat | cytosol | 47.07 | 48.8 |
| TraesCS6A01G270900.1 | Wheat | cytosol | 46.89 | 48.62 |
| KXG30927 | Sorghum | cytosol | 46.54 | 48.52 |
| TraesCS6D01G244200.1 | Wheat | cytosol | 46.71 | 48.43 |
| Zm00001d017755_P002 | Maize | cytosol | 46.54 | 48.43 |
| Zm00001d051553_P004 | Maize | cytosol | 45.83 | 47.78 |
| PGSC0003DMT400075550 | Potato | extracellular | 17.23 | 47.09 |
| GSMUA_Achr8P14490_001 | Banana | cytosol | 15.45 | 45.31 |
| HORVU6Hr1G068660.4 | Barley | nucleus | 43.34 | 40.33 |
| GSMUA_Achr11P... | Banana | cytosol | 12.61 | 39.01 |
| CDY57376 | Canola | cytosol, extracellular, nucleus | 5.15 | 38.67 |
| VIT_02s0087g00460.t01 | Wine grape | mitochondrion, nucleus | 60.92 | 37.61 |
| Solyc12g096220.1.1 | Tomato | nucleus | 48.13 | 37.23 |
| CDX67930 | Canola | nucleus | 30.02 | 34.7 |
| CDY70620 | Canola | nucleus | 28.42 | 34.12 |
| CDY18892 | Canola | nucleus | 27.18 | 33.85 |
| CDX74772 | Canola | nucleus, plastid | 27.0 | 33.78 |
| CDY44926 | Canola | nucleus | 29.31 | 33.4 |
| CDX92519 | Canola | plastid | 29.31 | 33.2 |
| CDY42277 | Canola | nucleus | 29.13 | 33.2 |
| CDY07216 | Canola | cytosol | 27.89 | 33.05 |
| CDX88884 | Canola | cytosol, plastid | 28.6 | 32.99 |
| CDY39783 | Canola | mitochondrion | 30.37 | 32.57 |
| HORVU6Hr1G041610.18 | Barley | plastid | 43.34 | 32.53 |
| CDY51157 | Canola | nucleus | 26.29 | 32.53 |
| CDY03297 | Canola | mitochondrion | 30.2 | 32.5 |
| CDY46477 | Canola | nucleus | 30.02 | 32.44 |
| CDX77402 | Canola | nucleus | 29.84 | 32.25 |
| CDX70882 | Canola | cytosol | 28.42 | 31.68 |
| CDY58963 | Canola | cytosol | 20.78 | 31.45 |
| CDX97723 | Canola | nucleus | 29.66 | 31.39 |
| CDX79407 | Canola | cytosol, endoplasmic reticulum, nucleus | 29.84 | 31.28 |
| CDY45633 | Canola | nucleus | 28.95 | 31.17 |
| CDY03296 | Canola | nucleus | 18.29 | 31.12 |
| CDY30136 | Canola | nucleus | 29.84 | 30.55 |
| CDX77457 | Canola | cytosol | 29.31 | 30.16 |
| CDX85176 | Canola | cytosol | 28.95 | 29.8 |
| CDY10476 | Canola | nucleus | 29.48 | 29.64 |
| CDY40325 | Canola | nucleus | 29.31 | 29.46 |
| CDX87879 | Canola | nucleus | 29.13 | 29.44 |
| CDY40246 | Canola | cytosol, plastid | 28.42 | 28.73 |
| CDY41197 | Canola | cytosol, plastid | 28.24 | 28.7 |
| CDY28381 | Canola | nucleus | 29.66 | 27.88 |
| CDY20181 | Canola | nucleus | 29.66 | 27.51 |
| CDY67259 | Canola | nucleus | 29.13 | 27.29 |
| CDY52982 | Canola | nucleus | 29.13 | 27.29 |
| CDX70109 | Canola | cytosol | 28.95 | 25.75 |
| CDX98888 | Canola | cytosol | 28.95 | 25.55 |
| CDX91908 | Canola | cytosol | 28.06 | 24.12 |
| CDX93028 | Canola | nucleus | 20.25 | 24.05 |
Protein Annotations
| Gene3D:1.20.58.2010 | MapMan:27.4.3.1 | GO:A0A078FJM8 | UniProt:A0A078FJM8 | EnsemblPlants:CDY12303 | ProteinID:CDY12303 |
| ProteinID:CDY12303.1 | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005089 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0065009 | EnsemblPlantsGene:GSBRNA2T00061390001 | InterPro:IPR005512 | PFAM:PF03759 | InterPro:PRONE_dom |
| PFscan:PS51334 | PANTHER:PTHR33101 | PANTHER:PTHR33101:SF2 | InterPro:RopGEF | UniParc:UPI0004EAC9BD | SEG:seg |
Description
BnaA09g25030DBnaA09g25030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJM8]
Coordinates
chrLK032019:+:722734..726166
Molecular Weight (calculated)
62895.6 Da
IEP (calculated)
5.385
GRAVY (calculated)
-0.537
Length
563 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLVRRRLGC CSRDREISID FDEQDRMITY DGLEACIINN QSYEEEEEEE ESGTNGCLTD SLDDDAFSSC SSSKEASSSF SSKWLPMKTE ERSCDGLNLP
101: GRSKHFDGKE KPSSNVYCHL DVEAMKEKFS KLLLGEDVTG GCKGIQVALA LSNAVTHLAN SIFGELWKLE PLCEEKKQKW RREMDWLLSP TNYMIELVPT
201: KQTDANGRSI EIMTPKARAD IHMNLPALQK LDSMLIEILD SMVNTEFWYS ETGSRAEGTN KTTSESKRWW LPSPQVPKPG LSNSARKKLL DKGKVVYQVF
301: KATKSINENV LLEMPVPSII KEAIPKSGKN SLGDELYKML VAESGTIDEI LVSLKLGAEH TALETVNKLE SAIFAWKERI TEQESNGKSP ARTPWSFGKD
401: PLSDTGRNEL VLSRAEALRS QIKSKYPNLP QSFLDATKIQ YGKDIGHAVL EAYSRTLANL AYRILSRMGE ILKEDSLSNP NSPAPPSCFP SSRDLYRTPE
501: RPLLSSRVRH SLTDDMNRAD GIETDTGLDF LFADAKVSSV NATTPSRSSR IWCMSKVPPD ASP
101: GRSKHFDGKE KPSSNVYCHL DVEAMKEKFS KLLLGEDVTG GCKGIQVALA LSNAVTHLAN SIFGELWKLE PLCEEKKQKW RREMDWLLSP TNYMIELVPT
201: KQTDANGRSI EIMTPKARAD IHMNLPALQK LDSMLIEILD SMVNTEFWYS ETGSRAEGTN KTTSESKRWW LPSPQVPKPG LSNSARKKLL DKGKVVYQVF
301: KATKSINENV LLEMPVPSII KEAIPKSGKN SLGDELYKML VAESGTIDEI LVSLKLGAEH TALETVNKLE SAIFAWKERI TEQESNGKSP ARTPWSFGKD
401: PLSDTGRNEL VLSRAEALRS QIKSKYPNLP QSFLDATKIQ YGKDIGHAVL EAYSRTLANL AYRILSRMGE ILKEDSLSNP NSPAPPSCFP SSRDLYRTPE
501: RPLLSSRVRH SLTDDMNRAD GIETDTGLDF LFADAKVSSV NATTPSRSSR IWCMSKVPPD ASP
001: MMLMRRRLAC CSREREISID FDEHEQDKMI TYYGLETCII NNQSYEEESG TSRGDGCLTD SLDDDAFSSC SSSKDASSSF SSKWLPMKND EHSCDGLNLS
101: GRSQHFDAKE KKKQGYGSSQ HFDAKEKPGY VYCHLDVEAM KEKFSKLLLG EDVTGGCKGV QVALALSNAV THLATSIFGE LWKLEPLCEE KKQKWRREMD
201: WLLSPTNYMI ELVPSKQNDA NGRSLEIMTP KARADIHMNL PALQKLDSML IETLDSMVNT EFWYSEIGSR AEGKNKSTSE SKRWWLPSPQ VPKPGLSNSG
301: RKKLLDKGKV VYQVFKATKA INENILLEMP VPIVIKEAIP KSGKNSLGDE LYKMLAVESA TVDEIFISLN LGTEHAALET VNKLESAMFA WKERITEQGS
401: NGKSPVRASW SFAKDPLSEI GRNESLLNRA EALRTQIKSK HPNLPHSFLD ATKIQYDKDI GHAVLEAYSR TLANLAFRIL SRMGEILKED SLSNPNSPAP
501: PSCFPSSRDP YRTPERPLLS SRVRHSLTDD MNKADGTETG LDFLFADAKA SNSVNTTPSR SSRLWCLSKV PSDTSP
101: GRSQHFDAKE KKKQGYGSSQ HFDAKEKPGY VYCHLDVEAM KEKFSKLLLG EDVTGGCKGV QVALALSNAV THLATSIFGE LWKLEPLCEE KKQKWRREMD
201: WLLSPTNYMI ELVPSKQNDA NGRSLEIMTP KARADIHMNL PALQKLDSML IETLDSMVNT EFWYSEIGSR AEGKNKSTSE SKRWWLPSPQ VPKPGLSNSG
301: RKKLLDKGKV VYQVFKATKA INENILLEMP VPIVIKEAIP KSGKNSLGDE LYKMLAVESA TVDEIFISLN LGTEHAALET VNKLESAMFA WKERITEQGS
401: NGKSPVRASW SFAKDPLSEI GRNESLLNRA EALRTQIKSK HPNLPHSFLD ATKIQYDKDI GHAVLEAYSR TLANLAFRIL SRMGEILKED SLSNPNSPAP
501: PSCFPSSRDP YRTPERPLLS SRVRHSLTDD MNKADGTETG LDFLFADAKA SNSVNTTPSR SSRLWCLSKV PSDTSP
Arabidopsis Description
ROPGEF14Rop guanine nucleotide exchange factor 14 [Source:UniProtKB/Swiss-Prot;Acc:Q56WM6]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.