Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000971.1-P | Field mustard | nucleus | 71.45 | 97.91 |
| CDY70620 | Canola | nucleus | 70.08 | 97.87 |
| AT4G00460.2 | Thale cress | nucleus | 67.63 | 93.66 |
| CDY07216 | Canola | cytosol | 66.87 | 92.21 |
| CDY51157 | Canola | nucleus | 63.66 | 91.65 |
| Solyc01g094610.2.1 | Tomato | nucleus | 45.65 | 62.68 |
| PGSC0003DMT400000136 | Potato | nucleus | 45.34 | 62.26 |
| VIT_15s0046g02530.t01 | Wine grape | plastid | 45.65 | 59.33 |
| CDX74772 | Canola | nucleus, plastid | 40.61 | 59.11 |
| CDY18892 | Canola | nucleus | 40.46 | 58.63 |
| GSMUA_Achr5P20570_001 | Banana | nucleus | 40.15 | 54.56 |
| EES11256 | Sorghum | nucleus | 38.63 | 53.72 |
| Zm00001d002696_P001 | Maize | cytosol | 37.71 | 53.46 |
| Os10t0550300-00 | Rice | plastid | 38.78 | 53.03 |
| TraesCS1D01G211900.1 | Wheat | nucleus | 38.02 | 52.2 |
| TraesCS1A01G208700.1 | Wheat | nucleus | 38.02 | 52.2 |
| TraesCS1B01G222700.1 | Wheat | plastid | 38.02 | 52.09 |
| TraesCS2B01G426300.1 | Wheat | cytosol | 36.79 | 51.83 |
| CDY69871 | Canola | cytosol | 8.85 | 51.79 |
| HORVU1Hr1G053350.4 | Barley | nucleus, plastid | 37.71 | 51.67 |
| TraesCS2A01G408100.1 | Wheat | cytosol | 36.64 | 51.28 |
| TraesCS2D01G405400.1 | Wheat | nucleus | 36.64 | 51.06 |
| EER91970 | Sorghum | plastid | 38.02 | 50.92 |
| Zm00001d029850_P001 | Maize | nucleus, plastid | 37.56 | 50.31 |
| Os07t0481100-01 | Rice | cytosol | 35.27 | 50.22 |
| Zm00001d021489_P001 | Maize | nucleus, plastid | 35.57 | 50.22 |
| EER99384 | Sorghum | nucleus, plastid | 34.96 | 49.46 |
| HORVU6Hr1G092860.2 | Barley | nucleus | 34.5 | 49.45 |
| TraesCS6A01G405000.1 | Wheat | nucleus | 34.5 | 49.45 |
| CDY57376 | Canola | cytosol, extracellular, nucleus | 5.65 | 49.33 |
| Os04t0559100-00 | Rice | cytosol | 13.59 | 48.9 |
| TraesCS6D01G388300.1 | Wheat | nucleus | 34.66 | 48.61 |
| TraesCS6B01G449200.1 | Wheat | nucleus | 34.35 | 47.77 |
| HORVU2Hr1G096430.13 | Barley | mitochondrion | 37.86 | 46.7 |
| CDY10476 | Canola | nucleus | 35.57 | 41.61 |
| CDY40325 | Canola | nucleus | 35.42 | 41.43 |
| CDX77457 | Canola | cytosol | 32.98 | 39.49 |
| CDX85176 | Canola | cytosol | 32.98 | 39.49 |
| CDY41197 | Canola | cytosol, plastid | 32.06 | 37.91 |
| CDY40246 | Canola | cytosol, plastid | 31.91 | 37.52 |
| CDX67930 | Canola | nucleus | 27.33 | 36.76 |
| CDY12411 | Canola | cytosol | 7.18 | 36.43 |
| CDX70109 | Canola | cytosol | 34.35 | 35.55 |
| CDY45633 | Canola | nucleus | 28.09 | 35.18 |
| CDX98888 | Canola | cytosol | 34.2 | 35.11 |
| CDY03297 | Canola | mitochondrion | 27.94 | 34.99 |
| CDY39783 | Canola | mitochondrion | 27.94 | 34.86 |
| CDY46477 | Canola | nucleus | 27.63 | 34.74 |
| CDX77402 | Canola | nucleus | 27.63 | 34.74 |
| CDY03296 | Canola | nucleus | 17.4 | 34.44 |
| CDX88884 | Canola | cytosol, plastid | 25.34 | 34.02 |
| CDX79407 | Canola | cytosol, endoplasmic reticulum, nucleus | 27.63 | 33.71 |
| CDY44926 | Canola | nucleus | 25.34 | 33.6 |
| CDY42277 | Canola | nucleus | 25.34 | 33.6 |
| CDX87879 | Canola | nucleus | 28.24 | 33.21 |
| CDX70882 | Canola | cytosol | 25.5 | 33.07 |
| CDX92519 | Canola | plastid | 24.73 | 32.6 |
| CDX97723 | Canola | nucleus | 26.26 | 32.33 |
| CDY30136 | Canola | nucleus | 26.56 | 31.64 |
| CDY58963 | Canola | cytosol | 17.86 | 31.45 |
| CDX84189 | Canola | cytosol | 23.51 | 31.36 |
| CDY31706 | Canola | cytosol | 23.82 | 31.01 |
| CDY67259 | Canola | nucleus | 27.63 | 30.12 |
| CDY52982 | Canola | nucleus | 27.48 | 29.95 |
| CDY28381 | Canola | nucleus | 26.87 | 29.38 |
| CDY20181 | Canola | nucleus | 26.87 | 29.0 |
| CDY12303 | Canola | nucleus | 24.12 | 28.06 |
| CDY62299 | Canola | cytosol, nucleus, plastid | 23.82 | 27.86 |
| CDX93028 | Canola | nucleus | 18.02 | 24.89 |
Protein Annotations
| Gene3D:1.20.58.1310 | Gene3D:1.20.58.2010 | Gene3D:2.60.40.150 | MapMan:27.4.3.1 | GO:A0A078DXC7 | InterPro:C2_dom |
| InterPro:C2_domain_sf | EnsemblPlants:CDX91908 | ProteinID:CDX91908 | ProteinID:CDX91908.1 | GO:GO:0003674 | GO:GO:0005089 |
| GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00153535001 | InterPro:IPR000008 | InterPro:IPR005512 | InterPro:IPR035892 |
| PFAM:PF00168 | PFAM:PF03759 | InterPro:PRONE_dom | PFscan:PS50004 | PFscan:PS51334 | PANTHER:PTHR33101 |
| PANTHER:PTHR33101:SF9 | InterPro:RopGEF | SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI0004EDEB28 | : |
Description
BnaC03g32100D
Coordinates
chrLK031870:+:729514..734512
Molecular Weight (calculated)
74092.4 Da
IEP (calculated)
5.818
GRAVY (calculated)
-0.390
Length
655 amino acids
Sequence
(BLAST)
(BLAST)
001: MMRGRLEVLL VDAHGITHTN FIGRPVYYVL LQCGTKEYRS KLSKAGHNDN ALWNQKFVFD FPMSQWKKLT HIKFKTMDKE LFKDGGFVGE TIIDLKGIIT
101: EGGDRGYMEV KPAPYNVVLD DDTFKGVLKL GFRFTAADKL QRKAWEQNIE GKNSEEAMNS TTLTLMKVPL LRFLLLTAAW ASMQDENEDA NYHQSRRSID
201: PNDQSASETP VYSSMSIDSF VYPRTCSEST SGFSDQIDHE TNSFCSDASP SDWPVLTESK SSKCLSTGLE MQSNGNLPVQ EISEAELETM KERFSKLLLG
301: EDMSGSGKGV CTAVTISNAI TNLYATVFGQ NLRLEPLETE KRALWKREMK CLLSVCDYIV EFIPRCQSLS NGTTVEVMES RPRADIYINL PALRKLDSML
401: MEALDSFQNT EFWYAEEGSL SMKSARSATG SFRKVIVQRK EEKWWLPVPL VPPEGLSDIA RKQLKNKRES TNQIHKAAMA INSSILSEME IPDSYMATLP
501: KCGKSSVGDS IYRYMSGSGR FFPEKLLDCL NIASEHEAVQ LADRVEASMY TWRRKACLSN SKNSWNLVKD LMSTTERTDK NYVMAERAET LLFCLKQRYP
601: ELSQTSLDIC KIQYNKDVGK AVLESYSRVL EGLAFNIVAW IDDVLYVDKT MSGSE
101: EGGDRGYMEV KPAPYNVVLD DDTFKGVLKL GFRFTAADKL QRKAWEQNIE GKNSEEAMNS TTLTLMKVPL LRFLLLTAAW ASMQDENEDA NYHQSRRSID
201: PNDQSASETP VYSSMSIDSF VYPRTCSEST SGFSDQIDHE TNSFCSDASP SDWPVLTESK SSKCLSTGLE MQSNGNLPVQ EISEAELETM KERFSKLLLG
301: EDMSGSGKGV CTAVTISNAI TNLYATVFGQ NLRLEPLETE KRALWKREMK CLLSVCDYIV EFIPRCQSLS NGTTVEVMES RPRADIYINL PALRKLDSML
401: MEALDSFQNT EFWYAEEGSL SMKSARSATG SFRKVIVQRK EEKWWLPVPL VPPEGLSDIA RKQLKNKRES TNQIHKAAMA INSSILSEME IPDSYMATLP
501: KCGKSSVGDS IYRYMSGSGR FFPEKLLDCL NIASEHEAVQ LADRVEASMY TWRRKACLSN SKNSWNLVKD LMSTTERTDK NYVMAERAET LLFCLKQRYP
601: ELSQTSLDIC KIQYNKDVGK AVLESYSRVL EGLAFNIVAW IDDVLYVDKT MSGSE
001: MENLSNPDEN DDHQSPRSID QNDQSAVETP VYSTMSIDSF VYPRTCSETT SGFSDQIDET NSFCSEASPC NWPVLTESKS SKCLSGLEMQ SNECLVVQEI
101: SEPELETMKE RFAKLLLGED MSGSGKGVCT AVTISNAITN LYATVFGQNL RLEPLETEKR ALWKREMNCL LSVCDYIVEF IPRCQNLSNG ATVEVMESRP
201: RADIYINLPA LRKLDSMLME ALDSFQNTEF WYAEEGSLSM KSARSSTGSF RKVIVQRKEE KWWLPVPLVP SEGLSDKARK QLKNKRESTN QIHKAAMAIN
301: SSILSEMEIP DSYMTTLPKC GKSSVGDSIY RYMSGSGRFF PEQLLDCLNI SSEHEAVQLA DRVEASMYTW RRKSCLSNSK NSWNMVKDLM STTERTDKNY
401: VMAERAETLL FCLKQRYPEL SQTSLDICKI QYNKDVGKAV LESYSRVLEG LAFNIVAWID DVLYVDKTMR GSE
101: SEPELETMKE RFAKLLLGED MSGSGKGVCT AVTISNAITN LYATVFGQNL RLEPLETEKR ALWKREMNCL LSVCDYIVEF IPRCQNLSNG ATVEVMESRP
201: RADIYINLPA LRKLDSMLME ALDSFQNTEF WYAEEGSLSM KSARSSTGSF RKVIVQRKEE KWWLPVPLVP SEGLSDKARK QLKNKRESTN QIHKAAMAIN
301: SSILSEMEIP DSYMTTLPKC GKSSVGDSIY RYMSGSGRFF PEQLLDCLNI SSEHEAVQLA DRVEASMYTW RRKSCLSNSK NSWNMVKDLM STTERTDKNY
401: VMAERAETLL FCLKQRYPEL SQTSLDICKI QYNKDVGKAV LESYSRVLEG LAFNIVAWID DVLYVDKTMR GSE
Arabidopsis Description
ROPGEF3Rop guanine nucleotide exchange factor 3 [Source:UniProtKB/Swiss-Prot;Acc:A4IJ27]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.