Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07216 | Canola | cytosol | 98.46 | 94.32 |
| Bra037342.1-P | Field mustard | cytosol | 98.24 | 93.71 |
| CDY70620 | Canola | nucleus | 92.09 | 89.34 |
| AT4G00460.2 | Thale cress | nucleus | 90.55 | 87.1 |
| CDX91908 | Canola | cytosol | 91.65 | 63.66 |
| Solyc01g094610.2.1 | Tomato | nucleus | 61.98 | 59.12 |
| PGSC0003DMT400000136 | Potato | nucleus | 61.54 | 58.7 |
| CDX74772 | Canola | nucleus, plastid | 56.26 | 56.89 |
| CDY18892 | Canola | nucleus | 56.04 | 56.42 |
| VIT_15s0046g02530.t01 | Wine grape | plastid | 62.42 | 56.35 |
| GSMUA_Achr5P20570_001 | Banana | nucleus | 55.38 | 52.28 |
| Os10t0550300-00 | Rice | plastid | 53.41 | 50.73 |
| EES11256 | Sorghum | nucleus | 52.31 | 50.53 |
| Zm00001d002696_P001 | Maize | cytosol | 50.99 | 50.22 |
| TraesCS1D01G211900.1 | Wheat | nucleus | 52.09 | 49.69 |
| TraesCS1A01G208700.1 | Wheat | nucleus | 52.09 | 49.69 |
| TraesCS2B01G426300.1 | Wheat | cytosol | 50.77 | 49.68 |
| TraesCS1B01G222700.1 | Wheat | plastid | 52.09 | 49.58 |
| CDY57376 | Canola | cytosol, extracellular, nucleus | 8.13 | 49.33 |
| HORVU1Hr1G053350.4 | Barley | nucleus, plastid | 51.65 | 49.16 |
| TraesCS2A01G408100.1 | Wheat | cytosol | 50.55 | 49.15 |
| TraesCS2D01G405400.1 | Wheat | nucleus | 50.55 | 48.94 |
| Os04t0559100-00 | Rice | cytosol | 19.56 | 48.9 |
| EER91970 | Sorghum | plastid | 52.31 | 48.67 |
| Os07t0481100-01 | Rice | cytosol | 48.79 | 48.26 |
| Zm00001d029850_P001 | Maize | nucleus, plastid | 51.43 | 47.85 |
| Zm00001d021489_P001 | Maize | nucleus, plastid | 48.79 | 47.84 |
| EER99384 | Sorghum | nucleus, plastid | 47.91 | 47.08 |
| TraesCS6A01G405000.1 | Wheat | nucleus | 47.25 | 47.05 |
| HORVU6Hr1G092860.2 | Barley | nucleus | 46.59 | 46.39 |
| TraesCS6D01G388300.1 | Wheat | nucleus | 47.47 | 46.25 |
| TraesCS6B01G449200.1 | Wheat | nucleus | 47.03 | 45.44 |
| HORVU2Hr1G096430.13 | Barley | mitochondrion | 50.33 | 43.13 |
| CDY69871 | Canola | cytosol | 10.55 | 42.86 |
| CDY10476 | Canola | nucleus | 48.13 | 39.11 |
| CDY40325 | Canola | nucleus | 47.91 | 38.93 |
| CDX77457 | Canola | cytosol | 45.71 | 38.03 |
| CDX85176 | Canola | cytosol | 45.71 | 38.03 |
| CDY12411 | Canola | cytosol | 10.55 | 37.21 |
| CDY41197 | Canola | cytosol, plastid | 43.96 | 36.1 |
| CDY40246 | Canola | cytosol, plastid | 43.74 | 35.73 |
| CDX67930 | Canola | nucleus | 37.58 | 35.11 |
| CDX70109 | Canola | cytosol | 48.13 | 34.6 |
| CDY45633 | Canola | nucleus | 39.34 | 34.23 |
| CDX98888 | Canola | cytosol | 47.91 | 34.17 |
| CDY03297 | Canola | mitochondrion | 38.9 | 33.84 |
| CDY46477 | Canola | nucleus | 38.68 | 33.78 |
| CDX77402 | Canola | nucleus | 38.68 | 33.78 |
| CDY39783 | Canola | mitochondrion | 38.9 | 33.71 |
| CDX88884 | Canola | cytosol, plastid | 35.38 | 32.99 |
| CDY42277 | Canola | nucleus | 35.38 | 32.59 |
| CDX79407 | Canola | cytosol, endoplasmic reticulum, nucleus | 38.24 | 32.4 |
| CDY44926 | Canola | nucleus | 35.16 | 32.39 |
| CDY03296 | Canola | nucleus | 23.52 | 32.33 |
| CDX87879 | Canola | nucleus | 39.34 | 32.14 |
| CDX70882 | Canola | cytosol | 35.6 | 32.08 |
| CDX92519 | Canola | plastid | 34.51 | 31.59 |
| CDX97723 | Canola | nucleus | 36.92 | 31.58 |
| CDY30136 | Canola | nucleus | 36.92 | 30.55 |
| CDY58963 | Canola | cytosol | 24.18 | 29.57 |
| CDX84189 | Canola | cytosol | 31.87 | 29.53 |
| CDY31706 | Canola | cytosol | 32.09 | 29.03 |
| CDY67259 | Canola | nucleus | 38.24 | 28.95 |
| CDY52982 | Canola | nucleus | 38.02 | 28.79 |
| CDY28381 | Canola | nucleus | 36.48 | 27.71 |
| CDY20181 | Canola | nucleus | 36.48 | 27.35 |
| CDY12303 | Canola | nucleus | 32.53 | 26.29 |
| CDY62299 | Canola | cytosol, nucleus, plastid | 32.31 | 26.25 |
| CDX93028 | Canola | nucleus | 25.93 | 24.89 |
Protein Annotations
| Gene3D:1.20.58.1310 | Gene3D:1.20.58.2010 | MapMan:27.4.3.1 | GO:A0A078IMK5 | UniProt:A0A078IMK5 | EnsemblPlants:CDY51157 |
| ProteinID:CDY51157 | ProteinID:CDY51157.1 | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005089 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0065009 | EnsemblPlantsGene:GSBRNA2T00098343001 | InterPro:IPR005512 | PFAM:PF03759 |
| InterPro:PRONE_dom | PFscan:PS51334 | PANTHER:PTHR33101 | PANTHER:PTHR33101:SF9 | InterPro:RopGEF | UniParc:UPI0004EE1BE3 |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g51920DBnaA09g51920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMK5]
Coordinates
chrLK032970:+:66911..68826
Molecular Weight (calculated)
51175.9 Da
IEP (calculated)
4.775
GRAVY (calculated)
-0.398
Length
455 amino acids
Sequence
(BLAST)
(BLAST)
001: MENVLNPDEN GDRVYHHHQS SIDPNDNSTS ETPVSLTMSM DSFVYPRTCS ESTSGFSDQI DETSSSCSEP SPSDWPVLTE SKSSKCLTTG LELQTNEILE
101: AQEISEPELE TMKERFAKLL LGEDMSGSGK GVCTAVTISN AITNLYATVF GQNLRLEPLE TEKRALWKRE MNCLLSVCDY IVEFIPRCQS LSNGTTVEVM
201: ESRPRADIYI NLPALRKLDS MLMESVGCLS MKSALIVQRK EEKWWLPVPL VPPEGLSDKA RKQLKNKRES TNQIHKAAMA INSSILSEME IPESYMATLP
301: KCGKSSVGDS IYRYMSGSGR FFPEKLLDCL NIASEHEAVQ LADRVEASMY TWRRKACLSN SKNSWNMVKD LMSTTERTDK NYVMAERAET LLFCLKQRYP
401: ELSQTSLDIC KIQYNKDVGK AVLESYSRVL EGLAFNIVAW IDDVLYVDKT MSGSE
101: AQEISEPELE TMKERFAKLL LGEDMSGSGK GVCTAVTISN AITNLYATVF GQNLRLEPLE TEKRALWKRE MNCLLSVCDY IVEFIPRCQS LSNGTTVEVM
201: ESRPRADIYI NLPALRKLDS MLMESVGCLS MKSALIVQRK EEKWWLPVPL VPPEGLSDKA RKQLKNKRES TNQIHKAAMA INSSILSEME IPESYMATLP
301: KCGKSSVGDS IYRYMSGSGR FFPEKLLDCL NIASEHEAVQ LADRVEASMY TWRRKACLSN SKNSWNMVKD LMSTTERTDK NYVMAERAET LLFCLKQRYP
401: ELSQTSLDIC KIQYNKDVGK AVLESYSRVL EGLAFNIVAW IDDVLYVDKT MSGSE
001: MENLSNPDEN DDHQSPRSID QNDQSAVETP VYSTMSIDSF VYPRTCSETT SGFSDQIDET NSFCSEASPC NWPVLTESKS SKCLSGLEMQ SNECLVVQEI
101: SEPELETMKE RFAKLLLGED MSGSGKGVCT AVTISNAITN LYATVFGQNL RLEPLETEKR ALWKREMNCL LSVCDYIVEF IPRCQNLSNG ATVEVMESRP
201: RADIYINLPA LRKLDSMLME ALDSFQNTEF WYAEEGSLSM KSARSSTGSF RKVIVQRKEE KWWLPVPLVP SEGLSDKARK QLKNKRESTN QIHKAAMAIN
301: SSILSEMEIP DSYMTTLPKC GKSSVGDSIY RYMSGSGRFF PEQLLDCLNI SSEHEAVQLA DRVEASMYTW RRKSCLSNSK NSWNMVKDLM STTERTDKNY
401: VMAERAETLL FCLKQRYPEL SQTSLDICKI QYNKDVGKAV LESYSRVLEG LAFNIVAWID DVLYVDKTMR GSE
101: SEPELETMKE RFAKLLLGED MSGSGKGVCT AVTISNAITN LYATVFGQNL RLEPLETEKR ALWKREMNCL LSVCDYIVEF IPRCQNLSNG ATVEVMESRP
201: RADIYINLPA LRKLDSMLME ALDSFQNTEF WYAEEGSLSM KSARSSTGSF RKVIVQRKEE KWWLPVPLVP SEGLSDKARK QLKNKRESTN QIHKAAMAIN
301: SSILSEMEIP DSYMTTLPKC GKSSVGDSIY RYMSGSGRFF PEQLLDCLNI SSEHEAVQLA DRVEASMYTW RRKSCLSNSK NSWNMVKDLM STTERTDKNY
401: VMAERAETLL FCLKQRYPEL SQTSLDICKI QYNKDVGKAV LESYSRVLEG LAFNIVAWID DVLYVDKTMR GSE
Arabidopsis Description
ROPGEF3Rop guanine nucleotide exchange factor 3 [Source:UniProtKB/Swiss-Prot;Acc:A4IJ27]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.