Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005323.1-P | Field mustard | nucleus | 98.61 | 99.0 |
| Bra005322.1-P | Field mustard | nucleus | 76.94 | 98.72 |
| CDY69871 | Canola | cytosol | 21.07 | 94.64 |
| CDX84189 | Canola | cytosol | 92.05 | 94.3 |
| CDY62299 | Canola | cytosol, nucleus, plastid | 68.99 | 61.96 |
| CDY12303 | Canola | nucleus | 68.59 | 61.28 |
| CDY12411 | Canola | cytosol | 15.11 | 58.91 |
| GSMUA_Achr8P14480_001 | Banana | nucleus | 28.23 | 54.83 |
| KRH39757 | Soybean | mitochondrion, nucleus | 59.64 | 53.29 |
| KRH76428 | Soybean | mitochondrion, nucleus | 59.44 | 53.11 |
| Solyc08g075120.2.1 | Tomato | extracellular | 59.24 | 52.93 |
| KRH07751 | Soybean | cytosol, nucleus, plastid | 58.25 | 52.79 |
| PGSC0003DMT400053650 | Potato | cytosol, nucleus, plastid | 58.85 | 52.58 |
| KRH07240 | Soybean | cytosol, nucleus, plastid | 57.65 | 52.16 |
| GSMUA_Achr11P... | Banana | cytosol | 33.6 | 50.6 |
| KXG30927 | Sorghum | cytosol | 48.31 | 45.0 |
| Zm00001d017755_P002 | Maize | cytosol | 47.91 | 44.55 |
| TraesCS6A01G270900.1 | Wheat | cytosol | 47.91 | 44.38 |
| TraesCS6B01G298000.1 | Wheat | cytosol | 47.91 | 44.38 |
| Os02t0702600-02 | Rice | cytosol | 47.91 | 44.38 |
| TraesCS6D01G244200.1 | Wheat | cytosol | 47.91 | 44.38 |
| Zm00001d051553_P004 | Maize | cytosol | 47.12 | 43.89 |
| GSMUA_Achr8P14490_001 | Banana | cytosol | 16.7 | 43.75 |
| PGSC0003DMT400075550 | Potato | extracellular | 17.89 | 43.69 |
| Solyc12g096220.1.1 | Tomato | nucleus | 52.68 | 36.4 |
| HORVU6Hr1G068660.4 | Barley | nucleus | 43.34 | 36.03 |
| CDY57376 | Canola | cytosol, extracellular, nucleus | 5.37 | 36.0 |
| CDX92519 | Canola | plastid | 34.0 | 34.41 |
| CDY44926 | Canola | nucleus | 33.4 | 34.01 |
| CDX88884 | Canola | cytosol, plastid | 32.6 | 33.61 |
| CDY42277 | Canola | nucleus | 33.0 | 33.6 |
| CDX67930 | Canola | nucleus | 32.41 | 33.47 |
| CDY70620 | Canola | nucleus | 31.01 | 33.26 |
| VIT_02s0087g00460.t01 | Wine grape | mitochondrion, nucleus | 59.24 | 32.68 |
| CDY58963 | Canola | cytosol | 24.06 | 32.53 |
| CDY07216 | Canola | cytosol | 30.62 | 32.42 |
| CDY51157 | Canola | nucleus | 29.03 | 32.09 |
| CDX70882 | Canola | cytosol | 32.21 | 32.08 |
| CDY18892 | Canola | nucleus | 28.63 | 31.86 |
| CDX74772 | Canola | nucleus, plastid | 28.23 | 31.56 |
| CDY03297 | Canola | mitochondrion | 32.8 | 31.55 |
| CDY39783 | Canola | mitochondrion | 32.8 | 31.43 |
| CDY46477 | Canola | nucleus | 32.21 | 31.09 |
| CDX77402 | Canola | nucleus | 32.21 | 31.09 |
| CDX77457 | Canola | cytosol | 33.2 | 30.53 |
| CDX79407 | Canola | cytosol, endoplasmic reticulum, nucleus | 32.41 | 30.35 |
| CDX85176 | Canola | cytosol | 33.0 | 30.35 |
| CDX97723 | Canola | nucleus | 31.41 | 29.7 |
| GSMUA_Achr11P... | Banana | cytosol | 10.74 | 29.67 |
| CDY45633 | Canola | nucleus | 30.62 | 29.45 |
| CDY03296 | Canola | nucleus | 19.28 | 29.31 |
| CDY30136 | Canola | nucleus | 31.81 | 29.09 |
| HORVU6Hr1G041610.18 | Barley | plastid | 43.34 | 29.07 |
| CDY10476 | Canola | nucleus | 32.01 | 28.75 |
| CDY40325 | Canola | nucleus | 31.81 | 28.57 |
| CDY40246 | Canola | cytosol, plastid | 31.61 | 28.55 |
| CDY41197 | Canola | cytosol, plastid | 31.41 | 28.52 |
| CDX87879 | Canola | nucleus | 30.82 | 27.83 |
| CDY28381 | Canola | nucleus | 31.21 | 26.21 |
| CDY67259 | Canola | nucleus | 31.21 | 26.12 |
| CDY52982 | Canola | nucleus | 31.21 | 26.12 |
| CDX70109 | Canola | cytosol | 32.8 | 26.07 |
| CDY20181 | Canola | nucleus | 31.21 | 25.86 |
| CDX98888 | Canola | cytosol | 32.8 | 25.86 |
| CDX91908 | Canola | cytosol | 31.01 | 23.82 |
| CDX93028 | Canola | nucleus | 20.28 | 21.52 |
Protein Annotations
| Gene3D:1.20.58.2010 | MapMan:27.4.3.1 | GO:A0A078H1P7 | UniProt:A0A078H1P7 | EnsemblPlants:CDY31706 | ProteinID:CDY31706 |
| ProteinID:CDY31706.1 | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005089 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0065009 | EnsemblPlantsGene:GSBRNA2T00050326001 | InterPro:IPR005512 | PFAM:PF03759 | InterPro:PRONE_dom |
| PFscan:PS51334 | PANTHER:PTHR33101 | PANTHER:PTHR33101:SF2 | InterPro:RopGEF | UniParc:UPI0004EE5D90 | SEG:seg |
Description
BnaA05g08410DBnaA05g08410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1P7]
Coordinates
chrLK032277:+:394682..396837
Molecular Weight (calculated)
56904.5 Da
IEP (calculated)
7.293
GRAVY (calculated)
-0.547
Length
503 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTYDGLETC INKNNNRSLQ EESGRSRGDE CLTDSLDDDA FSSCSSSKDT SESFSSKWLP KKNGKHISNE WDYERSPKHF YSKEERPVYT LCSSDVEAMK
101: EKFSKLLLGG DLTGGRKGVQ TALALSNAIS HLANSVFGEL WKLEPLSEDN KQRWRREMDW LLSPCSHMIE LVPSKLDDKN GRSLEIMTPK PRADIHMNLP
201: ALRKLDSMLI ETLDSMVNTE FWYSEVGPRV EESRRWWLPS PKVPKPGLSS LVRKNLLEKG NVVYQSFKAA KSINEEVLLE MPVPTIIKDS LPKSGKTSLG
301: DELFRMLASE SASVDEIFVS LRLRTEHSAL ETVNRLEAAI YAWKEKFTEQ RSSGKWSLVR DSLSEITRIE PLINKAERLN GQIKSKYSNL PHSFLDATKI
401: QYGKDIGHAI LEAYSRILAS LAFRILSRIR EILQEDALSN PSSPATPSCF SGSNDLFRTP ERLLVSSRLR HSLIHDINKA DDGTRNSSDF LNTDPRGSSF
501: SLI
101: EKFSKLLLGG DLTGGRKGVQ TALALSNAIS HLANSVFGEL WKLEPLSEDN KQRWRREMDW LLSPCSHMIE LVPSKLDDKN GRSLEIMTPK PRADIHMNLP
201: ALRKLDSMLI ETLDSMVNTE FWYSEVGPRV EESRRWWLPS PKVPKPGLSS LVRKNLLEKG NVVYQSFKAA KSINEEVLLE MPVPTIIKDS LPKSGKTSLG
301: DELFRMLASE SASVDEIFVS LRLRTEHSAL ETVNRLEAAI YAWKEKFTEQ RSSGKWSLVR DSLSEITRIE PLINKAERLN GQIKSKYSNL PHSFLDATKI
401: QYGKDIGHAI LEAYSRILAS LAFRILSRIR EILQEDALSN PSSPATPSCF SGSNDLFRTP ERLLVSSRLR HSLIHDINKA DDGTRNSSDF LNTDPRGSSF
501: SLI
001: MITYYGLETC IINNQSYEEE SGTSRGDGCL TDSLDDDAFS SCSSSKDASS SFSSKWLPMK NDEHSCDGLN LSGRSQHFDA KEKKKQGYGS SQHFDAKEKP
101: GYVYCHLDVE AMKEKFSKLL LGEDVTGGCK GVQVALALSN AVTHLATSIF GELWKLEPLC EEKKQKWRRE MDWLLSPTNY MIELVPSKQN DANGRSLEIM
201: TPKARADIHM NLPALQKLDS MLIETLDSMV NTEFWYSEIG SRAEGKNKST SESKRWWLPS PQVPKPGLSN SGRKKLLDKG KVVYQVFKAT KAINENILLE
301: MPVPIVIKEA IPKSGKNSLG DELYKMLAVE SATVDEIFIS LNLGTEHAAL ETVNKLESAM FAWKERITEQ GSNGKSPVRA SWSFAKDPLS EIGRNESLLN
401: RAEALRTQIK SKHPNLPHSF LDATKIQYDK DIGHAVLEAY SRTLANLAFR ILSRMGEILK EDSLSNPNSP APPSCFPSSR DPYRTPERPL LSSRVRHSLT
501: DDMNKADGTE TGLDFLFADA KASNSVNTTP SRSSRLWCLS KVPSDTSP
101: GYVYCHLDVE AMKEKFSKLL LGEDVTGGCK GVQVALALSN AVTHLATSIF GELWKLEPLC EEKKQKWRRE MDWLLSPTNY MIELVPSKQN DANGRSLEIM
201: TPKARADIHM NLPALQKLDS MLIETLDSMV NTEFWYSEIG SRAEGKNKST SESKRWWLPS PQVPKPGLSN SGRKKLLDKG KVVYQVFKAT KAINENILLE
301: MPVPIVIKEA IPKSGKNSLG DELYKMLAVE SATVDEIFIS LNLGTEHAAL ETVNKLESAM FAWKERITEQ GSNGKSPVRA SWSFAKDPLS EIGRNESLLN
401: RAEALRTQIK SKHPNLPHSF LDATKIQYDK DIGHAVLEAY SRTLANLAFR ILSRMGEILK EDSLSNPNSP APPSCFPSSR DPYRTPERPL LSSRVRHSLT
501: DDMNKADGTE TGLDFLFADA KASNSVNTTP SRSSRLWCLS KVPSDTSP
Arabidopsis Description
ROPGEF14Rop guanine nucleotide exchange factor 14 [Source:UniProtKB/Swiss-Prot;Acc:Q56WM6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.